RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 FAM47AQ5JRC9 791 aa10.54□□□□□ -0.72
PRIM1-208ENST00000552590 VPS37DQ86XT2 251 aa10.54□□□□□ -0.72
PRIM1-208ENST00000552590 ZSCAN29Q8IWY8 852 aaPredicted RBP10.54□□□□□ -0.72
PRIM1-208ENST00000552590 USP40Q9NVE5 1235 aa10.54□□□□□ -0.72
PRIM1-208ENST00000552590 TBX21Q9UL17 535 aa10.54□□□□□ -0.72
PRIM1-208ENST00000552590 PI4KAP2A4QPH2 592 aa10.53□□□□□ -0.72
PRIM1-208ENST00000552590 DCDC2CA8MYV0 355 aa10.53□□□□□ -0.72
PRIM1-208ENST00000552590 SEPT4O43236 478 aa10.53□□□□□ -0.72
PRIM1-208ENST00000552590 IL9P15248 144 aa10.53□□□□□ -0.72
PRIM1-208ENST00000552590 PLCB2Q00722 1185 aa10.53□□□□□ -0.72
PRIM1-208ENST00000552590 UBE4AQ14139 1066 aa10.53□□□□□ -0.72
PRIM1-208ENST00000552590 DIXDC1Q155Q3 683 aa10.53□□□□□ -0.72
PRIM1-208ENST00000552590 WDR78Q5VTH9 848 aa10.53□□□□□ -0.72
PRIM1-208ENST00000552590 ANKRD33Q7Z3H0 272 aa10.53□□□□□ -0.72
PRIM1-208ENST00000552590 FBXO33Q7Z6M2 555 aa10.53□□□□□ -0.72
PRIM1-208ENST00000552590 PI4KAP1Q8N8J0 262 aa10.53□□□□□ -0.72
PRIM1-208ENST00000552590 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.53□□□□□ -0.72
PRIM1-208ENST00000552590 CNNM1Q9NRU3 951 aa10.53□□□□□ -0.72
PRIM1-208ENST00000552590 CHMP3Q9Y3E7 222 aa10.53□□□□□ -0.72
PRIM1-208ENST00000552590 A0A1W2PQ45 241 aaPredicted RBP10.52□□□□□ -0.73
PRIM1-208ENST00000552590 A0A1W2PQY0 241 aa10.52□□□□□ -0.73
PRIM1-208ENST00000552590 MED19A0JLT2 244 aaPredicted RBP10.52□□□□□ -0.73
PRIM1-208ENST00000552590 DDTLA6NHG4 134 aaPredicted RBP10.52□□□□□ -0.73
PRIM1-208ENST00000552590 IGHA2P01877 340 aa10.52□□□□□ -0.73
PRIM1-208ENST00000552590 RGS3P49796 1198 aa10.52□□□□□ -0.73
PRIM1-208ENST00000552590 CASP7P55210 303 aa10.52□□□□□ -0.73
PRIM1-208ENST00000552590 NEXNQ0ZGT2 675 aa10.52□□□□□ -0.73
PRIM1-208ENST00000552590 GCKRQ14397 625 aa10.52□□□□□ -0.73
PRIM1-208ENST00000552590 SH3D19Q5HYK7 790 aa10.52□□□□□ -0.73
PRIM1-208ENST00000552590 PRAMEF19Q5SWL8 479 aa10.52□□□□□ -0.73
PRIM1-208ENST00000552590 LDHAL6AQ6ZMR3 332 aa10.52□□□□□ -0.73
PRIM1-208ENST00000552590 OTOP2Q7RTS6 562 aa10.52□□□□□ -0.73
PRIM1-208ENST00000552590 TOX2Q96NM4 488 aa10.52□□□□□ -0.73
PRIM1-208ENST00000552590 SLC15A5A6NIM6 579 aa10.51□□□□□ -0.73
PRIM1-208ENST00000552590 FAM196BA6NMK8 535 aa10.51□□□□□ -0.73
PRIM1-208ENST00000552590 GLRX3O76003 335 aaKnown RBP10.51□□□□□ -0.73
PRIM1-208ENST00000552590 HOXC6P09630 235 aa10.51□□□□□ -0.73
PRIM1-208ENST00000552590 HOXA7P31268 230 aaPredicted RBP10.51□□□□□ -0.73
PRIM1-208ENST00000552590 KSR2Q6VAB6 950 aa10.51□□□□□ -0.73
PRIM1-208ENST00000552590 TMEM199Q8N511 208 aa10.51□□□□□ -0.73
PRIM1-208ENST00000552590 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.51□□□□□ -0.73
PRIM1-208ENST00000552590 REPIN1Q9BWE0 567 aaKnown RBP10.51□□□□□ -0.73
PRIM1-208ENST00000552590 PPP1R12CQ9BZL4 782 aa10.51□□□□□ -0.73
PRIM1-208ENST00000552590 PRDM9Q9NQV7 894 aa10.51□□□□□ -0.73
PRIM1-208ENST00000552590 SUGT1Q9Y2Z0 365 aa10.51□□□□□ -0.73
PRIM1-208ENST00000552590 PCDHA11Q9Y5I1 949 aa10.51□□□□□ -0.73
PRIM1-208ENST00000552590 USP24Q9UPU5 2620 aa10.51□□□□□ -0.73
PRIM1-208ENST00000552590 GAKO14976 1311 aa10.51□□□□□ -0.73
PRIM1-208ENST00000552590 CEP250Q9BV73 2442 aa10.5□□□□□ -0.73
PRIM1-208ENST00000552590 ELL2O00472 640 aaPredicted RBP10.5□□□□□ -0.73
PRIM1-208ENST00000552590 FGBP02675 491 aa10.5□□□□□ -0.73
PRIM1-208ENST00000552590 MTMR2Q13614 643 aa10.5□□□□□ -0.73
PRIM1-208ENST00000552590 ARNTL2Q8WYA1 636 aa10.5□□□□□ -0.73
PRIM1-208ENST00000552590 CNTNAP3BQ96NU0 1288 aa10.5□□□□□ -0.73
PRIM1-208ENST00000552590 CNTNAP3Q9BZ76 1288 aa10.5□□□□□ -0.73
PRIM1-208ENST00000552590 MTIF3Q9H2K0 278 aaKnown RBP10.5□□□□□ -0.73
PRIM1-208ENST00000552590 UBE2ZQ9H832 354 aaPredicted RBP10.5□□□□□ -0.73
PRIM1-208ENST00000552590 IL23AQ9NPF7 189 aa10.5□□□□□ -0.73
PRIM1-208ENST00000552590 FAM208BQ5VWN6 2430 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 PGK1P00558 417 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 CA3P07451 260 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 TMPOP42166 694 aaKnown RBP10.49□□□□□ -0.73
PRIM1-208ENST00000552590 LMOD3Q0VAK6 560 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 PTGDRQ13258 359 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 GRB14Q14449 540 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 LEXMQ3ZCV2 418 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 TAF7LQ5H9L4 462 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 EPHA10Q5JZY3 1008 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 PTCRAQ6ISU1 281 aaPredicted RBP10.49□□□□□ -0.73
PRIM1-208ENST00000552590 ASCL5Q7RTU5 278 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 TMEM151AQ8N4L1 468 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 XPNPEP3Q9NQH7 507 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 PLXNA3P51805 1871 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 GPR179Q6PRD1 2367 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 FRYLO94915 3013 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 USP17L5A8MUK1 530 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 ENTPD3O75355 529 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 CNMDO75829 334 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 KCNA5P22460 613 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 MLLT3P42568 568 aaPredicted RBP10.49□□□□□ -0.73
PRIM1-208ENST00000552590 FOXO4P98177 505 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 GRB10Q13322 594 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 COL9A2Q14055 689 aaPredicted RBP10.49□□□□□ -0.73
PRIM1-208ENST00000552590 KCTD2Q14681 263 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 RRP1BQ14684 758 aaKnown RBP10.49□□□□□ -0.73
PRIM1-208ENST00000552590 NEUROD2Q15784 382 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 SMYD5Q6GMV2 418 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 ATOH1Q92858 354 aaPredicted RBP10.49□□□□□ -0.73
PRIM1-208ENST00000552590 PNNQ9H307 717 aaKnown RBP10.49□□□□□ -0.73
PRIM1-208ENST00000552590 TMOD4Q9NZQ9 345 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 SLC4A7Q9Y6M7 1214 aa10.49□□□□□ -0.73
PRIM1-208ENST00000552590 ATAD5Q96QE3 1844 aa10.48□□□□□ -0.73
PRIM1-208ENST00000552590 CYP2C18P33260 490 aa10.48□□□□□ -0.73
PRIM1-208ENST00000552590 RNF180Q86T96 592 aa10.48□□□□□ -0.73
PRIM1-208ENST00000552590 PRRX2Q99811 253 aa10.48□□□□□ -0.73
PRIM1-208ENST00000552590 IDI2Q9BXS1 227 aa10.48□□□□□ -0.73
PRIM1-208ENST00000552590 STARD7Q9NQZ5 370 aa10.48□□□□□ -0.73
PRIM1-208ENST00000552590 IVNS1ABPQ9Y6Y0 642 aa10.48□□□□□ -0.73
PRIM1-208ENST00000552590 COL4A6Q14031 1691 aa10.48□□□□□ -0.73
PRIM1-208ENST00000552590 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms