RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 VTI1AQ96AJ9 217 aa14.51□□□□□ -0.09
PTCH1-222ENST00000551425 UPF3AQ9H1J1 476 aaKnown RBP14.51□□□□□ -0.09
PTCH1-222ENST00000551425 SH2D4AQ9H788 454 aa14.51□□□□□ -0.09
PTCH1-222ENST00000551425 VCPKMTQ9H867 229 aa14.51□□□□□ -0.09
PTCH1-222ENST00000551425 MTCH2Q9Y6C9 303 aa14.51□□□□□ -0.09
PTCH1-222ENST00000551425 MUC6Q6W4X9 2439 aa14.5□□□□□ -0.09
PTCH1-222ENST00000551425 C6orf222P0C671 652 aaPredicted RBP14.5□□□□□ -0.09
PTCH1-222ENST00000551425 GJA9P57773 515 aa14.5□□□□□ -0.09
PTCH1-222ENST00000551425 IRX5P78411 483 aaPredicted RBP14.5□□□□□ -0.09
PTCH1-222ENST00000551425 OTOP2Q7RTS6 562 aa14.5□□□□□ -0.09
PTCH1-222ENST00000551425 FAM9BQ8IZU0 186 aa14.5□□□□□ -0.09
PTCH1-222ENST00000551425 KHSRPQ92945 711 aaKnown RBP eCLIP14.5□□□□□ -0.09
PTCH1-222ENST00000551425 RIOK1Q9BRS2 568 aaKnown RBP14.5□□□□□ -0.09
PTCH1-222ENST00000551425 SPC25Q9HBM1 224 aa14.5□□□□□ -0.09
PTCH1-222ENST00000551425 ARHGEF10LQ9HCE6 1279 aa14.5□□□□□ -0.09
PTCH1-222ENST00000551425 ZHX1Q9UKY1 873 aaPredicted RBP14.5□□□□□ -0.09
PTCH1-222ENST00000551425 ZNF214Q9UL59 606 aaPredicted RBP14.5□□□□□ -0.09
PTCH1-222ENST00000551425 SLC4A7Q9Y6M7 1214 aa14.5□□□□□ -0.09
PTCH1-222ENST00000551425 ZNFX1Q9P2E3 1918 aaKnown RBP14.49□□□□□ -0.09
PTCH1-222ENST00000551425 PI4K2BG5E9Z4 385 aa14.49□□□□□ -0.09
PTCH1-222ENST00000551425 VWA5AO00534 786 aa14.49□□□□□ -0.09
PTCH1-222ENST00000551425 GTPBP6O43824 516 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-222ENST00000551425 MYOGP15173 224 aa14.49□□□□□ -0.09
PTCH1-222ENST00000551425 NKX3-2P78367 333 aa14.49□□□□□ -0.09
PTCH1-222ENST00000551425 GNASQ5JWF2 1037 aa14.49□□□□□ -0.09
PTCH1-222ENST00000551425 SAMD1Q6SPF0 538 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-222ENST00000551425 ZNF467Q7Z7K2 595 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-222ENST00000551425 SLC43A3Q8NBI5 491 aa14.49□□□□□ -0.09
PTCH1-222ENST00000551425 REPS2Q8NFH8 660 aa14.49□□□□□ -0.09
PTCH1-222ENST00000551425 HIPK3Q9H422 1215 aa14.49□□□□□ -0.09
PTCH1-222ENST00000551425 DNAJC25-GNG10A0A024R161 153 aa14.48□□□□□ -0.09
PTCH1-222ENST00000551425 FAM86C2PA6NEL3 165 aa14.48□□□□□ -0.09
PTCH1-222ENST00000551425 ADCY6O43306 1168 aa14.48□□□□□ -0.09
PTCH1-222ENST00000551425 GNAI2P04899 355 aa14.48□□□□□ -0.09
PTCH1-222ENST00000551425 CT47B1P0C2W7 299 aaPredicted RBP14.48□□□□□ -0.09
PTCH1-222ENST00000551425 EVX2Q03828 476 aa14.48□□□□□ -0.09
PTCH1-222ENST00000551425 ICA1Q05084 483 aa14.48□□□□□ -0.09
PTCH1-222ENST00000551425 ACVR2BQ13705 512 aa14.48□□□□□ -0.09
PTCH1-222ENST00000551425 FBXO28Q9NVF7 368 aa14.48□□□□□ -0.09
PTCH1-222ENST00000551425 SWAP70Q9UH65 585 aa14.48□□□□□ -0.09
PTCH1-222ENST00000551425 PPP1R9AQ9ULJ8 1098 aa14.48□□□□□ -0.09
PTCH1-222ENST00000551425 MYO5AQ9Y4I1 1855 aaKnown RBP14.48□□□□□ -0.09
PTCH1-222ENST00000551425 UMODL1Q5DID0 1318 aa14.47□□□□□ -0.09
PTCH1-222ENST00000551425 CTAGE5O15320 804 aa14.47□□□□□ -0.09
PTCH1-222ENST00000551425 ATP2A2P16615 1042 aaKnown RBP14.47□□□□□ -0.09
PTCH1-222ENST00000551425 CLEC10AQ8IUN9 316 aa14.47□□□□□ -0.09
PTCH1-222ENST00000551425 RPUSD2Q8IZ73 545 aaKnown RBP14.47□□□□□ -0.09
PTCH1-222ENST00000551425 ARHGAP45Q92619 1136 aa14.47□□□□□ -0.09
PTCH1-222ENST00000551425 HLA-CQ95604 372 aa14.47□□□□□ -0.09
PTCH1-222ENST00000551425 NOC4LQ9BVI4 516 aaKnown RBP14.47□□□□□ -0.09
PTCH1-222ENST00000551425 MCM9Q9NXL9 1143 aa14.47□□□□□ -0.09
PTCH1-222ENST00000551425 DBNLQ9UJU6 430 aaKnown RBP14.47□□□□□ -0.09
PTCH1-222ENST00000551425 PARP14Q460N5 1801 aa14.47□□□□□ -0.09
PTCH1-222ENST00000551425 GBF1Q92538 1859 aa14.46□□□□□ -0.09
PTCH1-222ENST00000551425 SMIM22K7EJ46 135 aa14.46□□□□□ -0.09
PTCH1-222ENST00000551425 RFXAPO00287 272 aa14.46□□□□□ -0.09
PTCH1-222ENST00000551425 CCDC144BQ3MJ40 725 aa14.46□□□□□ -0.09
PTCH1-222ENST00000551425 VWCEQ96DN2 955 aa14.46□□□□□ -0.09
PTCH1-222ENST00000551425 DDX11Q96FC9 970 aa14.46□□□□□ -0.09
PTCH1-222ENST00000551425 SNX27Q96L92 541 aa14.46□□□□□ -0.09
PTCH1-222ENST00000551425 SEZ6LQ9BYH1 1024 aa14.46□□□□□ -0.09
PTCH1-222ENST00000551425 CRNKL1Q9BZJ0 848 aaKnown RBP14.46□□□□□ -0.09
PTCH1-222ENST00000551425 WNT8AQ9H1J5 351 aa14.46□□□□□ -0.09
PTCH1-222ENST00000551425 ABHD16BQ9H3Z7 469 aa14.46□□□□□ -0.09
PTCH1-222ENST00000551425 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-222ENST00000551425 LRRC37A2A6NM11 1700 aa14.46□□□□□ -0.1
PTCH1-222ENST00000551425 MAGEB6P1A0A0J9YX57 407 aa14.45□□□□□ -0.1
PTCH1-222ENST00000551425 PRR33A8MZF0 331 aa14.45□□□□□ -0.1
PTCH1-222ENST00000551425 ANP32CO43423 234 aa14.45□□□□□ -0.1
PTCH1-222ENST00000551425 CABYRO75952 493 aa14.45□□□□□ -0.1
PTCH1-222ENST00000551425 CA3P07451 260 aa14.45□□□□□ -0.1
PTCH1-222ENST00000551425 AKR1B1P15121 316 aa14.45□□□□□ -0.1
PTCH1-222ENST00000551425 CCL23P55773 120 aa14.45□□□□□ -0.1
PTCH1-222ENST00000551425 POLA2Q14181 598 aa14.45□□□□□ -0.1
PTCH1-222ENST00000551425 TMEM67Q5HYA8 995 aa14.45□□□□□ -0.1
PTCH1-222ENST00000551425 TRMT2AQ8IZ69 625 aaKnown RBP14.45□□□□□ -0.1
PTCH1-222ENST00000551425 CCDC17Q96LX7 622 aa14.45□□□□□ -0.1
PTCH1-222ENST00000551425 TEX13BQ9BXU2 312 aa14.45□□□□□ -0.1
PTCH1-222ENST00000551425 ANTXR1Q9H6X2 564 aa14.45□□□□□ -0.1
PTCH1-222ENST00000551425 PRRC2BQ5JSZ5 2229 aaKnown RBP14.45□□□□□ -0.1
PTCH1-222ENST00000551425 EPOPA6NHQ4 379 aa14.44□□□□□ -0.1
PTCH1-222ENST00000551425 ZBBXA8MT70 800 aa14.44□□□□□ -0.1
PTCH1-222ENST00000551425 MRE11P49959 708 aa14.44□□□□□ -0.1
PTCH1-222ENST00000551425 OS9Q13438 667 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-222ENST00000551425 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.44□□□□□ -0.1
PTCH1-222ENST00000551425 CD320Q9NPF0 282 aa14.44□□□□□ -0.1
PTCH1-222ENST00000551425 DCP1AQ9NPI6 582 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-222ENST00000551425 TLR7Q9NYK1 1049 aaKnown RBP14.44□□□□□ -0.1
PTCH1-222ENST00000551425 COL11A1P12107 1806 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-222ENST00000551425 PFKMP08237 780 aa14.43□□□□□ -0.1
PTCH1-222ENST00000551425 CYP2D6P10635 497 aa14.43□□□□□ -0.1
PTCH1-222ENST00000551425 EEF2P13639 858 aaKnown RBP14.43□□□□□ -0.1
PTCH1-222ENST00000551425 ITGA7Q13683 1181 aa14.43□□□□□ -0.1
PTCH1-222ENST00000551425 KRT40Q6A162 431 aa14.43□□□□□ -0.1
PTCH1-222ENST00000551425 SNRNP48Q6IEG0 339 aaKnown RBP14.43□□□□□ -0.1
PTCH1-222ENST00000551425 CXCL17Q6UXB2 119 aa14.43□□□□□ -0.1
PTCH1-222ENST00000551425 DYNLL2Q96FJ2 89 aa14.43□□□□□ -0.1
PTCH1-222ENST00000551425 FGD4Q96M96 766 aa14.43□□□□□ -0.1
PTCH1-222ENST00000551425 AGBL1Q96MI9 1066 aa14.43□□□□□ -0.1
PTCH1-222ENST00000551425 KATNBL1Q9H079 304 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms