RNA–Protein interactions for RNA: ENST00000551424.5

CNTN1-209, Transcript of contactin 1, humanhuman

TSL 3

Gene CNTN1, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-209ENST00000551424 PHF24Q9UPV7 400 aa27.29■■□□□ 1.96
CNTN1-209ENST00000551424 TLE2Q04725 743 aa27.28■■□□□ 1.96
CNTN1-209ENST00000551424 LRRC47Q8N1G4 583 aaKnown RBP27.28■■□□□ 1.96
CNTN1-209ENST00000551424 PRPF38AQ8NAV1 312 aaKnown RBP27.28■■□□□ 1.96
CNTN1-209ENST00000551424 KIFC2Q96AC6 838 aa27.28■■□□□ 1.96
CNTN1-209ENST00000551424 ISY1Q9ULR0 285 aaKnown RBP27.28■■□□□ 1.96
CNTN1-209ENST00000551424 RIPK3Q9Y572 518 aa27.28■■□□□ 1.96
CNTN1-209ENST00000551424 IGKV6D-41A0A0C4DH26 115 aa27.27■■□□□ 1.96
CNTN1-209ENST00000551424 ZBED4O75132 1171 aa27.27■■□□□ 1.96
CNTN1-209ENST00000551424 ZNF865P0CJ78 1059 aaPredicted RBP27.27■■□□□ 1.96
CNTN1-209ENST00000551424 AKR1A1P14550 325 aa27.27■■□□□ 1.96
CNTN1-209ENST00000551424 SHHQ15465 462 aa27.27■■□□□ 1.96
CNTN1-209ENST00000551424 CEP95Q96GE4 821 aa27.27■■□□□ 1.96
CNTN1-209ENST00000551424 ZNF287Q9HBT7 754 aa27.27■■□□□ 1.96
CNTN1-209ENST00000551424 RAVER2Q9HCJ3 691 aaKnown RBP27.27■■□□□ 1.96
CNTN1-209ENST00000551424 TRIM43BA6NCK2 446 aa27.26■■□□□ 1.95
CNTN1-209ENST00000551424 LRRFIP1Q32MZ4 808 aaKnown RBP27.26■■□□□ 1.95
CNTN1-209ENST00000551424 C9orf50Q5SZB4 431 aa27.26■■□□□ 1.95
CNTN1-209ENST00000551424 IFNL3Q8IZI9 196 aa27.26■■□□□ 1.95
CNTN1-209ENST00000551424 TRIM43Q96BQ3 446 aaPredicted RBP27.26■■□□□ 1.95
CNTN1-209ENST00000551424 SEC62Q99442 399 aaKnown RBP27.26■■□□□ 1.95
CNTN1-209ENST00000551424 ZHX1Q9UKY1 873 aaPredicted RBP27.26■■□□□ 1.95
CNTN1-209ENST00000551424 COL6A3P12111 3177 aa27.25■■□□□ 1.95
CNTN1-209ENST00000551424 FSD1Q9BTV5 496 aa27.25■■□□□ 1.95
CNTN1-209ENST00000551424 A0A1W2PQ45 241 aaPredicted RBP27.24■■□□□ 1.95
CNTN1-209ENST00000551424 A0A1W2PQY0 241 aa27.24■■□□□ 1.95
CNTN1-209ENST00000551424 PATL2C9JE40 543 aaKnown RBP27.24■■□□□ 1.95
CNTN1-209ENST00000551424 PQBP1O60828 265 aaKnown RBP27.24■■□□□ 1.95
CNTN1-209ENST00000551424 OTUD7AQ8TE49 926 aaPredicted RBP27.24■■□□□ 1.95
CNTN1-209ENST00000551424 NACAP1Q9BZK3 213 aa27.24■■□□□ 1.95
CNTN1-209ENST00000551424 MTMR4Q9NYA4 1195 aa27.24■■□□□ 1.95
CNTN1-209ENST00000551424 POTEB2H3BUK9 544 aa27.23■■□□□ 1.95
CNTN1-209ENST00000551424 TTLL1O95922 423 aa27.23■■□□□ 1.95
CNTN1-209ENST00000551424 TSPY3P0CV98 308 aa27.23■■□□□ 1.95
CNTN1-209ENST00000551424 TSPY8P0CW00 308 aa27.23■■□□□ 1.95
CNTN1-209ENST00000551424 ZNF697Q5TEC3 545 aa27.23■■□□□ 1.95
CNTN1-209ENST00000551424 C1orf53Q5VUE5 145 aa27.23■■□□□ 1.95
CNTN1-209ENST00000551424 FAM109BQ6ICB4 259 aaPredicted RBP27.23■■□□□ 1.95
CNTN1-209ENST00000551424 CHMP4CQ96CF2 233 aa27.23■■□□□ 1.95
CNTN1-209ENST00000551424 NAPBQ9H115 298 aa27.23■■□□□ 1.95
CNTN1-209ENST00000551424 FEM1BQ9UK73 627 aa27.23■■□□□ 1.95
CNTN1-209ENST00000551424 TTC41PQ6P2S7 1318 aa27.22■■□□□ 1.95
CNTN1-209ENST00000551424 SYNRGQ9UMZ2 1314 aa27.22■■□□□ 1.95
CNTN1-209ENST00000551424 ERC2O15083 957 aa27.22■■□□□ 1.95
CNTN1-209ENST00000551424 ADAMTS4O75173 837 aa27.22■■□□□ 1.95
CNTN1-209ENST00000551424 SNAI1O95863 264 aaPredicted RBP27.22■■□□□ 1.95
CNTN1-209ENST00000551424 CLTBP09497 229 aa27.22■■□□□ 1.95
CNTN1-209ENST00000551424 SLFN13Q68D06 897 aa27.22■■□□□ 1.95
CNTN1-209ENST00000551424 ANKRD35Q8N283 1001 aa27.22■■□□□ 1.95
CNTN1-209ENST00000551424 GUCD1Q96NT3 240 aa27.22■■□□□ 1.95
CNTN1-209ENST00000551424 FAM184BQ9ULE4 1060 aa27.22■■□□□ 1.95
CNTN1-209ENST00000551424 PCDHB15Q9Y5E8 787 aa27.22■■□□□ 1.95
CNTN1-209ENST00000551424 TACC3Q9Y6A5 838 aa27.22■■□□□ 1.95
CNTN1-209ENST00000551424 MCM3APO60318 1980 aa27.22■■□□□ 1.95
CNTN1-209ENST00000551424 SYNGAP1Q96PV0 1343 aa27.21■■□□□ 1.95
CNTN1-209ENST00000551424 DNAJC25-GNG10A0A024R161 153 aa27.21■■□□□ 1.95
CNTN1-209ENST00000551424 ATP2A1O14983 1001 aa27.21■■□□□ 1.95
CNTN1-209ENST00000551424 PDE4BQ07343 736 aa27.21■■□□□ 1.95
CNTN1-209ENST00000551424 MSL3Q8N5Y2 521 aaKnown RBP27.21■■□□□ 1.95
CNTN1-209ENST00000551424 PI4K2BQ8TCG2 481 aa27.21■■□□□ 1.95
CNTN1-209ENST00000551424 MKL1Q969V6 931 aa27.21■■□□□ 1.95
CNTN1-209ENST00000551424 SLC38A10Q9HBR0 1119 aa27.21■■□□□ 1.95
CNTN1-209ENST00000551424 HOMER2Q9NSB8 354 aa27.21■■□□□ 1.95
CNTN1-209ENST00000551424 SLC3A2P08195 630 aaKnown RBP27.2■■□□□ 1.94
CNTN1-209ENST00000551424 BMP3P12645 472 aa27.2■■□□□ 1.94
CNTN1-209ENST00000551424 TFAP4Q01664 338 aa27.2■■□□□ 1.94
CNTN1-209ENST00000551424 GMCL1P1Q8NEA9 526 aa27.2■■□□□ 1.94
CNTN1-209ENST00000551424 NEDD1Q8NHV4 660 aa27.2■■□□□ 1.94
CNTN1-209ENST00000551424 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.2■■□□□ 1.94
CNTN1-209ENST00000551424 RAG1P15918 1043 aa27.19■■□□□ 1.94
CNTN1-209ENST00000551424 ITGB8P26012 769 aa27.19■■□□□ 1.94
CNTN1-209ENST00000551424 ACLYP53396 1101 aa27.19■■□□□ 1.94
CNTN1-209ENST00000551424 PPARAQ07869 468 aa27.19■■□□□ 1.94
CNTN1-209ENST00000551424 IKQ13123 557 aaPredicted RBP27.19■■□□□ 1.94
CNTN1-209ENST00000551424 MAMDC4Q6UXC1 1216 aa27.19■■□□□ 1.94
CNTN1-209ENST00000551424 STARD7Q9NQZ5 370 aa27.19■■□□□ 1.94
CNTN1-209ENST00000551424 PLIN4Q96Q06 1357 aa27.19■■□□□ 1.94
CNTN1-209ENST00000551424 ZMYM1Q5SVZ6 1142 aa27.18■■□□□ 1.94
CNTN1-209ENST00000551424 TSEN34Q9BSV6 310 aaKnown RBP27.18■■□□□ 1.94
CNTN1-209ENST00000551424 TMEM39AQ9NV64 488 aa27.18■■□□□ 1.94
CNTN1-209ENST00000551424 FBXO40Q9UH90 709 aa27.18■■□□□ 1.94
CNTN1-209ENST00000551424 SYNPO2Q9UMS6 1093 aa27.18■■□□□ 1.94
CNTN1-209ENST00000551424 MYADML2A6NDP7 307 aa27.17■■□□□ 1.94
CNTN1-209ENST00000551424 TMEM232C9JQI7 657 aa27.17■■□□□ 1.94
CNTN1-209ENST00000551424 IRX5P78411 483 aaPredicted RBP27.17■■□□□ 1.94
CNTN1-209ENST00000551424 ACVR2BQ13705 512 aa27.17■■□□□ 1.94
CNTN1-209ENST00000551424 KCNA10Q16322 511 aa27.17■■□□□ 1.94
CNTN1-209ENST00000551424 CCDC129Q6ZRS4 1044 aa27.17■■□□□ 1.94
CNTN1-209ENST00000551424 ZNF467Q7Z7K2 595 aaPredicted RBP27.17■■□□□ 1.94
CNTN1-209ENST00000551424 CHST13Q8NET6 341 aa27.17■■□□□ 1.94
CNTN1-209ENST00000551424 FGD4Q96M96 766 aa27.17■■□□□ 1.94
CNTN1-209ENST00000551424 KIAA0355O15063 1070 aa27.16■■□□□ 1.94
CNTN1-209ENST00000551424 C6orf222P0C671 652 aaPredicted RBP27.16■■□□□ 1.94
CNTN1-209ENST00000551424 MX1P20591 662 aa27.16■■□□□ 1.94
CNTN1-209ENST00000551424 KLHDC9Q8NEP7 349 aa27.16■■□□□ 1.94
CNTN1-209ENST00000551424 NUP133Q8WUM0 1156 aa27.16■■□□□ 1.94
CNTN1-209ENST00000551424 DUSP11O75319 330 aaKnown RBP27.15■■□□□ 1.94
CNTN1-209ENST00000551424 OAZ1P54368 228 aa27.15■■□□□ 1.94
CNTN1-209ENST00000551424 EPHB4P54760 987 aa27.15■■□□□ 1.94
CNTN1-209ENST00000551424 ARMCX2Q7L311 632 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms