RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 MCM5P33992 734 aa8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 FGD1P98174 961 aa8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 PABPC4Q13310 644 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 USP17L2Q6R6M4 530 aa8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 CATSPERGQ6ZRH7 1159 aa8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 NECAB2Q7Z6G3 386 aa8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 RALYLQ86SE5 291 aaKnown RBP8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 SIAH1Q8IUQ4 282 aa8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 ANKLE1Q8NAG6 615 aa8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 SLC44A5Q8NCS7 719 aa8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 NPLOC4Q8TAT6 608 aa8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 BRF1Q92994 677 aa8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 GTF3C6Q969F1 213 aa8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 NOL10Q9BSC4 688 aaKnown RBP8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 HMX1Q9NP08 348 aaPredicted RBP8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 TMOD4Q9NZQ9 345 aa8.65□□□□□ -1.02
SMARCD1-210ENST00000551352 CYP2D7A0A087X1C5 515 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 PRC1O43663 620 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 PFKFB2O60825 505 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 XRCC5P13010 732 aaKnown RBP8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 PTMSP20962 102 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 GJB2P29033 226 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 TDO2P48775 406 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 ANTXR2P58335 489 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 APOBRQ0VD83 1088 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 TRDNQ13061 729 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 SEPT2Q15019 361 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 LRRC26Q2I0M4 334 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 LBX2Q6XYB7 198 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 GPRC5AQ8NFJ5 357 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 SDR42E1Q8WUS8 393 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 DYNLL2Q96FJ2 89 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 NUDT12Q9BQG2 462 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 KIAA1683Q9H0B3 1180 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 GINM1Q9NU53 330 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 SERPINB13Q9UIV8 391 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 NR2E3Q9Y5X4 410 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 GBF1Q92538 1859 aa8.64□□□□□ -1.03
SMARCD1-210ENST00000551352 CUL9Q8IWT3 2517 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 NEDD4P46934 1319 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 A0A1W2PPC1 479 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 GOLGA6L22H0YM25 854 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 STX6O43752 255 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 HLA-DOAP06340 250 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 SYT1P21579 422 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 PTPREP23469 700 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 MAPK4P31152 587 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 MAGEA10P43363 369 aaPredicted RBP8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 USP5P45974 858 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 EVCP57679 992 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 MAP2K5Q13163 448 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 STK3Q13188 491 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 ABCB5Q2M3G0 1257 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 GIMAP6Q6P9H5 292 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 Q7L0L9 218 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 CHST3Q7LGC8 479 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 PLEKHH3Q7Z736 793 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 STAG1Q8WVM7 1258 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 SOCS4Q8WXH5 440 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 ZNF274Q96GC6 653 aaPredicted RBP8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 APBA2Q99767 749 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 C11orf49Q9H6J7 331 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 RABGAP1Q9Y3P9 1069 aa8.63□□□□□ -1.03
SMARCD1-210ENST00000551352 TCHHQ07283 1943 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 B4E1Z4 1266 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 USP17L15C9J2P7 530 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 USP17L13C9JLJ4 530 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 USP17L11C9JVI0 530 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 USP17L18D6R9N7 530 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 USP17L22D6RA61 530 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 USP17L17D6RBQ6 530 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 USP17L19D6RCP7 530 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 USP17L20D6RJB6 530 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 ZSCAN22P10073 491 aaPredicted RBP8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 AKR1B1P15121 316 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 PDIA3P30101 505 aaKnown RBP8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 BMP8BP34820 402 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 CTDSPL2Q05D32 466 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 PPARAQ07869 468 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 USP17L24Q0WX57 530 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 SCRN1Q12765 414 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 GRB14Q14449 540 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 CERKLQ49MI3 558 aaPredicted RBP8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 AKNAD1Q5T1N1 836 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 FOXD4L5Q5VV16 416 aaPredicted RBP8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 CYB5R4Q7L1T6 521 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 FOXD4L4Q8WXT5 416 aaPredicted RBP8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 TMEM87BQ96K49 555 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 LLPHQ9BRT6 129 aaKnown RBP8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 CRNKL1Q9BZJ0 848 aaKnown RBP8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 KRT23Q9C075 422 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 RNF41Q9H4P4 317 aaPredicted RBP8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 RPAP3Q9H6T3 665 aaPredicted RBP8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 CNNM2Q9H8M5 875 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 DCP1AQ9NPI6 582 aaPredicted RBP8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 GPHNQ9NQX3 736 aaPredicted RBP8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 ANAPC4Q9UJX5 808 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 TACC3Q9Y6A5 838 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 PRUNE2Q8WUY3 3088 aa8.62□□□□□ -1.03
SMARCD1-210ENST00000551352 CHD9Q3L8U1 2897 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms