RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 BIRC3Q13489 604 aa13.02□□□□□ -0.33
LGR5-206ENST00000550851 VPS72Q15906 364 aa13.02□□□□□ -0.33
LGR5-206ENST00000550851 TMC4Q7Z404 712 aa13.02□□□□□ -0.33
LGR5-206ENST00000550851 ZFP91Q96JP5 570 aaPredicted RBP13.02□□□□□ -0.33
LGR5-206ENST00000550851 DDX25Q9UHL0 483 aaKnown RBP13.02□□□□□ -0.33
LGR5-206ENST00000550851 FRMD4BQ9Y2L6 1034 aa13.02□□□□□ -0.33
LGR5-206ENST00000550851 CCDC172P0C7W6 258 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 DESP17661 470 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 GPSM2P81274 684 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 IFFO1Q0D2I5 559 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 SPECC1LQ69YQ0 1117 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 GPBP1Q86WP2 473 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 STAG1Q8WVM7 1258 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 BRIP1Q9BX63 1249 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 COL3A1P02461 1466 aaPredicted RBP13.01□□□□□ -0.33
LGR5-206ENST00000550851 EPB41P11171 864 aaKnown RBP13.01□□□□□ -0.33
LGR5-206ENST00000550851 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
LGR5-206ENST00000550851 SEPT7Q16181 437 aaKnown RBP13.01□□□□□ -0.33
LGR5-206ENST00000550851 AMNQ9BXJ7 453 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 IMPG2Q9BZV3 1241 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 KANSL2Q9H9L4 492 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 ARHGEF28Q8N1W1 1705 aaKnown RBP13.01□□□□□ -0.33
LGR5-206ENST00000550851 ANKRD62A6NC57 917 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 UBE2SQ16763 222 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 GPATCH4Q5T3I0 446 aaKnown RBP13.01□□□□□ -0.33
LGR5-206ENST00000550851 TTLL6Q8N841 843 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 OXER1Q8TDS5 423 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 NAA15Q9BXJ9 866 aaKnown RBP13.01□□□□□ -0.33
LGR5-206ENST00000550851 PXDNQ92626 1479 aa13.01□□□□□ -0.33
LGR5-206ENST00000550851 UBN2Q6ZU65 1347 aa13□□□□□ -0.33
LGR5-206ENST00000550851 CACNB1Q02641 598 aaPredicted RBP13□□□□□ -0.33
LGR5-206ENST00000550851 GOLGA8FQ08AF8 430 aa13□□□□□ -0.33
LGR5-206ENST00000550851 GOLGA8DPQ0D2H9 430 aa13□□□□□ -0.33
LGR5-206ENST00000550851 SYNCQ9H7C4 482 aa13□□□□□ -0.33
LGR5-206ENST00000550851 LY9Q9HBG7 655 aa13□□□□□ -0.33
LGR5-206ENST00000550851 ARFGAP3Q9NP61 516 aa13□□□□□ -0.33
LGR5-206ENST00000550851 PI4KBQ9UBF8 816 aa13□□□□□ -0.33
LGR5-206ENST00000550851 PCDHA4Q9UN74 947 aa13□□□□□ -0.33
LGR5-206ENST00000550851 B4DLN1 442 aa13□□□□□ -0.33
LGR5-206ENST00000550851 RIOK3O14730 519 aaKnown RBP13□□□□□ -0.33
LGR5-206ENST00000550851 EXOC3O60645 756 aa13□□□□□ -0.33
LGR5-206ENST00000550851 CASP1P29466 404 aa13□□□□□ -0.33
LGR5-206ENST00000550851 CHRNA5P30532 468 aa13□□□□□ -0.33
LGR5-206ENST00000550851 RBM6P78332 1123 aaKnown RBP13□□□□□ -0.33
LGR5-206ENST00000550851 TBC1D10BQ4KMP7 808 aaPredicted RBP13□□□□□ -0.33
LGR5-206ENST00000550851 CTR9Q6PD62 1173 aa13□□□□□ -0.33
LGR5-206ENST00000550851 TMEM47Q9BQJ4 181 aa13□□□□□ -0.33
LGR5-206ENST00000550851 PLA2G12BQ9BX93 195 aa13□□□□□ -0.33
LGR5-206ENST00000550851 IRX3P78415 501 aaPredicted RBP13□□□□□ -0.33
LGR5-206ENST00000550851 PRR5LQ6MZQ0 368 aa13□□□□□ -0.33
LGR5-206ENST00000550851 PRPF3O43395 683 aaKnown RBP12.99□□□□□ -0.33
LGR5-206ENST00000550851 NTSR2O95665 410 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 AOC3Q16853 763 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 DHX37Q8IY37 1157 aaKnown RBP12.99□□□□□ -0.33
LGR5-206ENST00000550851 CERKQ8TCT0 537 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 KIAA1024Q9UPX6 916 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 SPATA31A5Q5VU36 1347 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 SPATA31A7Q8IWB4 1347 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 PPP6R2O75170 966 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 GH2P01242 217 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 ADRA2BP18089 450 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 PABPC4Q13310 644 aaKnown RBP eCLIP12.99□□□□□ -0.33
LGR5-206ENST00000550851 GPR162Q16538 588 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 DGKHQ86XP1 1220 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 CCPG1Q9ULG6 757 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 NOP56O00567 594 aaKnown RBP12.99□□□□□ -0.33
LGR5-206ENST00000550851 RPN1P04843 607 aaKnown RBP12.99□□□□□ -0.33
LGR5-206ENST00000550851 ASPRV1Q53RT3 343 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 CCDC93Q567U6 631 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 GTPBP4Q9BZE4 634 aaKnown RBP12.99□□□□□ -0.33
LGR5-206ENST00000550851 NT5C3AQ9H0P0 336 aa12.99□□□□□ -0.33
LGR5-206ENST00000550851 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.99□□□□□ -0.33
LGR5-206ENST00000550851 GCOM1H8Y6P7 765 aaPredicted RBP12.98□□□□□ -0.33
LGR5-206ENST00000550851 ARHGAP6O43182 974 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 POLR2MP0CAP2 368 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 PPP1R2P41236 205 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 TERF1P54274 439 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 SETQ01105 290 aaPredicted RBP12.98□□□□□ -0.33
LGR5-206ENST00000550851 PLA2G4DQ86XP0 818 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 SMCR8Q8TEV9 937 aaPredicted RBP12.98□□□□□ -0.33
LGR5-206ENST00000550851 CEP95Q96GE4 821 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 CARD6Q9BX69 1037 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 CWC15Q9P013 229 aaKnown RBP12.98□□□□□ -0.33
LGR5-206ENST00000550851 CSADQ9Y600 493 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 MST1RQ04912 1400 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 USP32Q8NFA0 1604 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 KCNJ18B7U540 433 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 CRKP46108 304 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 SMTNP53814 917 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 MORC3Q14149 939 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 KCNJ12Q14500 433 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 SF3B3Q15393 1217 aaKnown RBP12.98□□□□□ -0.33
LGR5-206ENST00000550851 IFI16Q16666 785 aaKnown RBP12.98□□□□□ -0.33
LGR5-206ENST00000550851 TMTC3Q6ZXV5 915 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 NLRX1Q86UT6 975 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 FNBP1Q96RU3 617 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 USP42Q9H9J4 1324 aaKnown RBP12.98□□□□□ -0.33
LGR5-206ENST00000550851 GTPBP6O43824 516 aaPredicted RBP12.98□□□□□ -0.33
LGR5-206ENST00000550851 BMP3P12645 472 aa12.98□□□□□ -0.33
LGR5-206ENST00000550851 HOXA13P31271 388 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms