RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 CCDC102BQ68D86 513 aa7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 GPAT2Q6NUI2 795 aa7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 FOXR1Q6PIV2 292 aa7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 OTOP1Q7RTM1 612 aa7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 FBXO33Q7Z6M2 555 aa7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 BANK1Q8NDB2 785 aa7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 ZBED3Q96IU2 234 aaPredicted RBP7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 PRMT6Q96LA8 375 aaPredicted RBP7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 ZFYVE28Q9HCC9 887 aa7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 GNL3LQ9NVN8 582 aaKnown RBP7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 PAG1Q9NWQ8 432 aa7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 SERPINA10Q9UK55 444 aa7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 TTF2Q9UNY4 1162 aaKnown RBP7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 DNMT3AQ9Y6K1 912 aaPredicted RBP7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 NDUFB9Q9Y6M9 179 aa7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 PDE4DIPQ5VU43 2346 aa7.4□□□□□ -1.23
DEPDC4-209ENST00000550587 SPATA31C2B4DYI2 1134 aa7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 SNAP23O00161 211 aa7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 EPB41L2O43491 1005 aaKnown RBP7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 USP2O75604 605 aaPredicted RBP7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 REC8O95072 547 aa7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 PHKA1P46020 1223 aa7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 NBPF12Q5TAG4 269 aaPredicted RBP7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 KANK3Q6NY19 840 aa7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 KBTBD3Q8NAB2 608 aa7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 TBC1D22AQ8WUA7 517 aa7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 RUFY2Q8WXA3 655 aa7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 OPTNQ96CV9 577 aa7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 FAM84BQ96KN1 310 aaPredicted RBP7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 DNAJC2Q99543 621 aaKnown RBP7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 ESYT1Q9BSJ8 1104 aa7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 USP26Q9BXU7 913 aa7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 ELP3Q9H9T3 547 aa7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 FZD1Q9UP38 647 aa7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 PTPN22Q9Y2R2 807 aa7.39□□□□□ -1.23
DEPDC4-209ENST00000550587 A0A1B0GUL6 1792 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 ARAP2Q8WZ64 1704 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 RFX7Q2KHR2 1363 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 MAST3O60307 1309 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 CNTNAP5Q8WYK1 1306 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 TCP10L2B9ZVM9 353 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 GOLIM4O00461 696 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 SGSM2O43147 1006 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 MCAMP43121 646 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 MFAP1P55081 439 aaKnown RBP7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 CRHR2Q13324 411 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 TTF1Q15361 905 aaPredicted RBP7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 TAF1CQ15572 869 aaPredicted RBP7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 SLC4A8Q2Y0W8 1093 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 LRRFIP1Q32MZ4 808 aaKnown RBP7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 SLC9C1Q4G0N8 1177 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 CERS5Q8N5B7 392 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 CD99L2Q8TCZ2 262 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 ACDQ96AP0 544 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 CLMNQ96JQ2 1002 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 TBC1D32Q96NH3 1257 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 FSD1Q9BTV5 496 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 C22orf23Q9BZE7 217 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 TDRD3Q9H7E2 651 aaKnown RBP7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 TIMMDC1Q9NPL8 285 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 ENAMQ9NRM1 1142 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 DIAPH3Q9NSV4 1193 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 ZNF70Q9UC06 446 aaPredicted RBP7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 JAG2Q9Y219 1238 aa7.38□□□□□ -1.23
DEPDC4-209ENST00000550587 PDS5AQ29RF7 1337 aaKnown RBP7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 FAM205AQ6ZU69 1335 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 IRS2Q9Y4H2 1338 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 ECM29Q5VYK3 1845 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 CCL15-CCL14A0A0B4J2E2 113 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 IGF2BP3O00425 579 aaKnown RBP eCLIP7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 RNF113AO15541 343 aaKnown RBP7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 GNRH1P01148 92 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 IL2RAP01589 272 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 CYP2E1P05181 493 aaPredicted RBP7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 ZFYP08048 801 aaPredicted RBP7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 CETPP11597 493 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 ZAP70P43403 619 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 GYG1P46976 350 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 RBM25P49756 843 aaKnown RBP7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 HDLBPQ00341 1268 aaKnown RBP7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 CCL15Q16663 113 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 HABP4Q5JVS0 413 aaKnown RBP7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 DCAF15Q66K64 600 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 CWC27Q6UX04 472 aaKnown RBP7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 TAS1R3Q7RTX0 852 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 SPATA5Q8NB90 893 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 TDRD7Q8NHU6 1098 aaKnown RBP7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 TEKT1Q969V4 418 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 EDC3Q96F86 508 aaKnown RBP7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 R3HDMLQ9H3Y0 253 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 HMG20BQ9P0W2 317 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 DENND2AQ9ULE3 1009 aa7.37□□□□□ -1.23
DEPDC4-209ENST00000550587 RAD50Q92878 1312 aa7.36□□□□□ -1.23
DEPDC4-209ENST00000550587 IGSF3O75054 1194 aa7.36□□□□□ -1.23
DEPDC4-209ENST00000550587 F11P03951 625 aa7.36□□□□□ -1.23
DEPDC4-209ENST00000550587 THBS1P07996 1170 aa7.36□□□□□ -1.23
DEPDC4-209ENST00000550587 BCRP11274 1271 aa7.36□□□□□ -1.23
DEPDC4-209ENST00000550587 HOXD10P28358 340 aa7.36□□□□□ -1.23
DEPDC4-209ENST00000550587 PHKA2P46019 1235 aa7.36□□□□□ -1.23
DEPDC4-209ENST00000550587 CRKP46108 304 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms