RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 TMEM151BQ8IW70 566 aa4.88□□□□□ -1.63
CCNT1-203ENST00000550457 LRRC3Q9BY71 257 aa4.88□□□□□ -1.63
CCNT1-203ENST00000550457 PRDM14Q9GZV8 571 aa4.88□□□□□ -1.63
CCNT1-203ENST00000550457 BRMS1Q9HCU9 246 aa4.88□□□□□ -1.63
CCNT1-203ENST00000550457 KCNQ5Q9NR82 932 aa4.88□□□□□ -1.63
CCNT1-203ENST00000550457 VTI1BQ9UEU0 232 aa4.88□□□□□ -1.63
CCNT1-203ENST00000550457 IRAK3Q9Y616 596 aa4.88□□□□□ -1.63
CCNT1-203ENST00000550457 OTOL1A6NHN0 477 aaPredicted RBP4.87□□□□□ -1.63
CCNT1-203ENST00000550457 IRS4O14654 1257 aaPredicted RBP4.87□□□□□ -1.63
CCNT1-203ENST00000550457 N4BP3O15049 544 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 GREM1O60565 184 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 ATE1O95260 518 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 PNLIPP16233 465 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 CRKP46108 304 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 CDR1P51861 262 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 KRTAP10-2P60368 255 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 ERVFRD-1P60508 538 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 PWP1Q13610 501 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 VMACQ2NL98 169 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 TMEFF1Q8IYR6 380 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 ZNF512BQ96KM6 892 aaPredicted RBP4.87□□□□□ -1.63
CCNT1-203ENST00000550457 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.87□□□□□ -1.63
CCNT1-203ENST00000550457 SIRT5Q9NXA8 310 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 RTEL1Q9NZ71 1219 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 GMIPQ9P107 970 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 KLHL14Q9P2G3 628 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 JAG2Q9Y219 1238 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 CLSPNQ9HAW4 1339 aa4.87□□□□□ -1.63
CCNT1-203ENST00000550457 FADS2P1A8MWK0 482 aa4.86□□□□□ -1.63
CCNT1-203ENST00000550457 SIGLEC6O43699 453 aa4.86□□□□□ -1.63
CCNT1-203ENST00000550457 AFF3P51826 1226 aaKnown RBP4.86□□□□□ -1.63
CCNT1-203ENST00000550457 RTP1P59025 263 aa4.86□□□□□ -1.63
CCNT1-203ENST00000550457 CHMP4BP1P59074 171 aa4.86□□□□□ -1.63
CCNT1-203ENST00000550457 NFIXQ14938 502 aa4.86□□□□□ -1.63
CCNT1-203ENST00000550457 CWF19L2Q2TBE0 894 aaKnown RBP4.86□□□□□ -1.63
CCNT1-203ENST00000550457 HSF5Q4G112 596 aaPredicted RBP4.86□□□□□ -1.63
CCNT1-203ENST00000550457 CDCP2Q5VXM1 449 aa4.86□□□□□ -1.63
CCNT1-203ENST00000550457 MZB1Q8WU39 189 aa4.86□□□□□ -1.63
CCNT1-203ENST00000550457 CNNM2Q9H8M5 875 aa4.86□□□□□ -1.63
CCNT1-203ENST00000550457 GPR55Q9Y2T6 319 aaPredicted RBP4.86□□□□□ -1.63
CCNT1-203ENST00000550457 SSU72P8A0A1W2PR75 194 aa4.85□□□□□ -1.63
CCNT1-203ENST00000550457 CTSKP43235 329 aa4.85□□□□□ -1.63
CCNT1-203ENST00000550457 MLECQ14165 292 aa4.85□□□□□ -1.63
CCNT1-203ENST00000550457 SLCO6A1Q86UG4 719 aa4.85□□□□□ -1.63
CCNT1-203ENST00000550457 IGDCC3Q8IVU1 814 aa4.85□□□□□ -1.63
CCNT1-203ENST00000550457 TMEM192Q8IY95 271 aa4.85□□□□□ -1.63
CCNT1-203ENST00000550457 FEZF2Q8TBJ5 459 aa4.85□□□□□ -1.63
CCNT1-203ENST00000550457 ATG4CQ96DT6 458 aa4.85□□□□□ -1.63
CCNT1-203ENST00000550457 FCRL2Q96LA5 508 aaPredicted RBP4.85□□□□□ -1.63
CCNT1-203ENST00000550457 ANTXR1Q9H6X2 564 aa4.85□□□□□ -1.63
CCNT1-203ENST00000550457 EHMT1Q9H9B1 1298 aa4.85□□□□□ -1.63
CCNT1-203ENST00000550457 ERVK13-1Q9NX77 482 aa4.85□□□□□ -1.63
CCNT1-203ENST00000550457 TNFRSF10DQ9UBN6 386 aa4.85□□□□□ -1.63
CCNT1-203ENST00000550457 ROBO2Q9HCK4 1378 aa4.84□□□□□ -1.63
CCNT1-203ENST00000550457 MEIS1O00470 390 aa4.84□□□□□ -1.63
CCNT1-203ENST00000550457 SYN1P17600 705 aa4.84□□□□□ -1.63
CCNT1-203ENST00000550457 EIF4A3P38919 411 aaKnown RBP4.84□□□□□ -1.63
CCNT1-203ENST00000550457 CLCQ05315 142 aa4.84□□□□□ -1.63
CCNT1-203ENST00000550457 SKOR2Q2VWA4 1001 aaPredicted RBP4.84□□□□□ -1.63
CCNT1-203ENST00000550457 LDHDQ86WU2 507 aa4.84□□□□□ -1.63
CCNT1-203ENST00000550457 FAM129CQ86XR2 697 aa4.84□□□□□ -1.63
CCNT1-203ENST00000550457 SYT8Q8NBV8 401 aa4.84□□□□□ -1.63
CCNT1-203ENST00000550457 CXorf38Q8TB03 319 aa4.84□□□□□ -1.63
CCNT1-203ENST00000550457 MRS2Q9HD23 443 aa4.84□□□□□ -1.63
CCNT1-203ENST00000550457 CHST7Q9NS84 486 aa4.84□□□□□ -1.63
CCNT1-203ENST00000550457 LOC105371045A0A1W2PR82 267 aa4.83□□□□□ -1.64
CCNT1-203ENST00000550457 CLEC3AO75596 197 aa4.83□□□□□ -1.64
CCNT1-203ENST00000550457 ZNF205O95201 554 aa4.83□□□□□ -1.64
CCNT1-203ENST00000550457 GALNT18Q6P9A2 607 aa4.83□□□□□ -1.64
CCNT1-203ENST00000550457 CNKSR3Q6P9H4 555 aa4.83□□□□□ -1.64
CCNT1-203ENST00000550457 NLRC3Q7RTR2 1065 aa4.83□□□□□ -1.64
CCNT1-203ENST00000550457 TMC6Q7Z403 805 aa4.83□□□□□ -1.64
CCNT1-203ENST00000550457 ZDHHC14Q8IZN3 488 aa4.83□□□□□ -1.64
CCNT1-203ENST00000550457 TMEM52Q8NDY8 209 aa4.83□□□□□ -1.64
CCNT1-203ENST00000550457 ZNF296Q8WUU4 475 aaPredicted RBP4.83□□□□□ -1.64
CCNT1-203ENST00000550457 GFOD1Q9NXC2 390 aa4.83□□□□□ -1.64
CCNT1-203ENST00000550457 ADAMTS1Q9UHI8 967 aa4.83□□□□□ -1.64
CCNT1-203ENST00000550457 SUPT16HQ9Y5B9 1047 aaKnown RBP4.83□□□□□ -1.64
CCNT1-203ENST00000550457 PCDHA5Q9Y5H7 936 aa4.83□□□□□ -1.64
CCNT1-203ENST00000550457 TAF6LQ9Y6J9 622 aa4.83□□□□□ -1.64
CCNT1-203ENST00000550457 WTIPA6NIX2 430 aaPredicted RBP4.82□□□□□ -1.64
CCNT1-203ENST00000550457 ABLIM1O14639 778 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 SASH1O94885 1247 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 MPOP05164 745 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 PRKCAP17252 672 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 BMP8BP34820 402 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 NCKAP1LP55160 1127 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 RAD51AP2Q09MP3 1159 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 RAB3GAP1Q15042 981 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 SEZ6Q53EL9 994 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 CRTC3Q6UUV7 619 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 GK5Q6ZS86 529 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 AEBP1Q8IUX7 1158 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 TP53I13Q8NBR0 393 aaPredicted RBP4.82□□□□□ -1.64
CCNT1-203ENST00000550457 JMJD8Q96S16 334 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 CDADC1Q9BWV3 514 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 TNFRSF12AQ9NP84 129 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 UBP1Q9NZI7 540 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 ACSL6Q9UKU0 697 aa4.82□□□□□ -1.64
CCNT1-203ENST00000550457 ADAMTS20P59510 1910 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms