RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 SERPINA10Q9UK55 444 aa23.89■■□□□ 1.41
PRDM4-205ENST00000550376 TCP10L2B9ZVM9 353 aa23.88■■□□□ 1.41
PRDM4-205ENST00000550376 PSMD14O00487 310 aa23.88■■□□□ 1.41
PRDM4-205ENST00000550376 JAG1P78504 1218 aa23.88■■□□□ 1.41
PRDM4-205ENST00000550376 LRMPQ12912 555 aa23.88■■□□□ 1.41
PRDM4-205ENST00000550376 JAKMIP3Q5VZ66 844 aa23.88■■□□□ 1.41
PRDM4-205ENST00000550376 ARID5BQ14865 1188 aa23.88■■□□□ 1.41
PRDM4-205ENST00000550376 CCDC96Q2M329 555 aa23.88■■□□□ 1.41
PRDM4-205ENST00000550376 CERKLQ49MI3 558 aaPredicted RBP23.88■■□□□ 1.41
PRDM4-205ENST00000550376 PP2D1A8MPX8 630 aa23.87■■□□□ 1.41
PRDM4-205ENST00000550376 NCAPHQ15003 741 aa23.87■■□□□ 1.41
PRDM4-205ENST00000550376 C4orf32Q8N8J7 132 aa23.87■■□□□ 1.41
PRDM4-205ENST00000550376 PI4KBQ9UBF8 816 aa23.87■■□□□ 1.41
PRDM4-205ENST00000550376 QSER1Q2KHR3 1735 aa23.87■■□□□ 1.41
PRDM4-205ENST00000550376 ATP1A3P13637 1013 aa23.87■■□□□ 1.41
PRDM4-205ENST00000550376 SEPT2Q15019 361 aa23.87■■□□□ 1.41
PRDM4-205ENST00000550376 CCDC148Q8NFR7 591 aa23.87■■□□□ 1.41
PRDM4-205ENST00000550376 MAN1B1Q9UKM7 699 aa23.87■■□□□ 1.41
PRDM4-205ENST00000550376 PYCARDQ9ULZ3 195 aa23.87■■□□□ 1.41
PRDM4-205ENST00000550376 EEF2P13639 858 aaKnown RBP23.86■■□□□ 1.41
PRDM4-205ENST00000550376 PTPN21Q16825 1174 aa23.86■■□□□ 1.41
PRDM4-205ENST00000550376 CCDC93Q567U6 631 aa23.86■■□□□ 1.41
PRDM4-205ENST00000550376 FERMT2Q96AC1 680 aa23.86■■□□□ 1.41
PRDM4-205ENST00000550376 IDI2Q9BXS1 227 aa23.86■■□□□ 1.41
PRDM4-205ENST00000550376 ZMYND12Q9H0C1 365 aa23.86■■□□□ 1.41
PRDM4-205ENST00000550376 RIOX1Q9H6W3 641 aa23.86■■□□□ 1.41
PRDM4-205ENST00000550376 RRP1BQ14684 758 aaKnown RBP23.86■■□□□ 1.41
PRDM4-205ENST00000550376 LETM2Q2VYF4 491 aa23.86■■□□□ 1.41
PRDM4-205ENST00000550376 ADGRF4Q8IZF3 695 aa23.86■■□□□ 1.41
PRDM4-205ENST00000550376 PLIN2Q99541 437 aa23.86■■□□□ 1.41
PRDM4-205ENST00000550376 MRIQ9BWK5 157 aa23.86■■□□□ 1.41
PRDM4-205ENST00000550376 TRIM34Q9BYJ4 488 aa23.86■■□□□ 1.41
PRDM4-205ENST00000550376 PLIN4Q96Q06 1357 aa23.85■■□□□ 1.41
PRDM4-205ENST00000550376 USP17L10C9JJH3 530 aa23.85■■□□□ 1.41
PRDM4-205ENST00000550376 TRAPPC10P48553 1259 aa23.85■■□□□ 1.41
PRDM4-205ENST00000550376 FKBP1AP62942 108 aaKnown RBP23.85■■□□□ 1.41
PRDM4-205ENST00000550376 ZNF543Q08ER8 600 aa23.85■■□□□ 1.41
PRDM4-205ENST00000550376 SUPT20HQ8NEM7 779 aa23.85■■□□□ 1.41
PRDM4-205ENST00000550376 JMJD4Q9H9V9 463 aa23.85■■□□□ 1.41
PRDM4-205ENST00000550376 ZNF500O60304 480 aaPredicted RBP23.84■■□□□ 1.41
PRDM4-205ENST00000550376 PPP1R11O60927 126 aaPredicted RBP23.84■■□□□ 1.41
PRDM4-205ENST00000550376 SNHG28P0DPA3 235 aa23.84■■□□□ 1.41
PRDM4-205ENST00000550376 SNAP25P60880 206 aa23.84■■□□□ 1.41
PRDM4-205ENST00000550376 HDLBPQ00341 1268 aaKnown RBP23.84■■□□□ 1.41
PRDM4-205ENST00000550376 SIAH1Q8IUQ4 282 aa23.84■■□□□ 1.41
PRDM4-205ENST00000550376 CDAN1Q8IWY9 1227 aa23.84■■□□□ 1.41
PRDM4-205ENST00000550376 HSD3B7Q9H2F3 369 aa23.84■■□□□ 1.41
PRDM4-205ENST00000550376 BLZF1Q9H2G9 400 aa23.84■■□□□ 1.41
PRDM4-205ENST00000550376 RGPD3A6NKT7 1758 aaPredicted RBP23.84■■□□□ 1.41
PRDM4-205ENST00000550376 RGPD4Q7Z3J3 1758 aa23.84■■□□□ 1.41
PRDM4-205ENST00000550376 COL4A5P29400 1685 aa23.84■■□□□ 1.41
PRDM4-205ENST00000550376 SOGA3Q5TF21 947 aa23.84■■□□□ 1.41
PRDM4-205ENST00000550376 CC2D2BQ6DHV5 1058 aa23.84■■□□□ 1.41
PRDM4-205ENST00000550376 FILIP1Q7Z7B0 1213 aa23.84■■□□□ 1.41
PRDM4-205ENST00000550376 PAGE5Q96GU1 130 aa23.84■■□□□ 1.41
PRDM4-205ENST00000550376 NUP88Q99567 741 aaPredicted RBP23.84■■□□□ 1.41
PRDM4-205ENST00000550376 DHX36Q9H2U1 1008 aaKnown RBP23.84■■□□□ 1.41
PRDM4-205ENST00000550376 C10orf71Q711Q0 1435 aa23.83■■□□□ 1.41
PRDM4-205ENST00000550376 SMARCE1Q969G3 411 aa23.83■■□□□ 1.41
PRDM4-205ENST00000550376 EHD4Q9H223 541 aa23.83■■□□□ 1.41
PRDM4-205ENST00000550376 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.83■■□□□ 1.41
PRDM4-205ENST00000550376 CCNT1O60563 726 aaKnown RBP23.83■■□□□ 1.4
PRDM4-205ENST00000550376 BMP15O95972 392 aa23.83■■□□□ 1.4
PRDM4-205ENST00000550376 SARM1Q6SZW1 724 aa23.83■■□□□ 1.4
PRDM4-205ENST00000550376 TRMT44Q8IYL2 757 aaKnown RBP23.83■■□□□ 1.4
PRDM4-205ENST00000550376 CSRNP1Q96S65 589 aa23.83■■□□□ 1.4
PRDM4-205ENST00000550376 C6orf50Q9HD87 102 aa23.83■■□□□ 1.4
PRDM4-205ENST00000550376 IFNKQ9P0W0 207 aa23.83■■□□□ 1.4
PRDM4-205ENST00000550376 SMC2O95347 1197 aa23.82■■□□□ 1.4
PRDM4-205ENST00000550376 ASPRV1Q53RT3 343 aa23.82■■□□□ 1.4
PRDM4-205ENST00000550376 RSBN1LQ6PCB5 846 aaPredicted RBP23.82■■□□□ 1.4
PRDM4-205ENST00000550376 SMYD4Q8IYR2 804 aaPredicted RBP23.82■■□□□ 1.4
PRDM4-205ENST00000550376 SHTN1A0MZ66 631 aa23.82■■□□□ 1.4
PRDM4-205ENST00000550376 SLFN14P0C7P3 912 aa23.82■■□□□ 1.4
PRDM4-205ENST00000550376 KARSQ15046 597 aaKnown RBP23.82■■□□□ 1.4
PRDM4-205ENST00000550376 RTKN2Q8IZC4 609 aa23.82■■□□□ 1.4
PRDM4-205ENST00000550376 DAGLBQ8NCG7 672 aa23.82■■□□□ 1.4
PRDM4-205ENST00000550376 COBLO75128 1261 aa23.81■■□□□ 1.4
PRDM4-205ENST00000550376 FMR1Q06787 632 aaKnown RBP eCLIP23.81■■□□□ 1.4
PRDM4-205ENST00000550376 UBE2SQ16763 222 aa23.81■■□□□ 1.4
PRDM4-205ENST00000550376 TBCKQ8TEA7 893 aa23.81■■□□□ 1.4
PRDM4-205ENST00000550376 UIMC1Q96RL1 719 aa23.81■■□□□ 1.4
PRDM4-205ENST00000550376 BPIFA3Q9BQP9 254 aa23.81■■□□□ 1.4
PRDM4-205ENST00000550376 XPO4Q9C0E2 1151 aaKnown RBP23.81■■□□□ 1.4
PRDM4-205ENST00000550376 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.81■■□□□ 1.4
PRDM4-205ENST00000550376 HOOK1Q9UJC3 728 aaKnown RBP23.81■■□□□ 1.4
PRDM4-205ENST00000550376 GOLGA6L6A8MZA4 724 aa23.81■■□□□ 1.4
PRDM4-205ENST00000550376 SARSP49591 514 aaKnown RBP23.81■■□□□ 1.4
PRDM4-205ENST00000550376 FANCLQ9NW38 375 aa23.81■■□□□ 1.4
PRDM4-205ENST00000550376 MYH8P13535 1937 aa23.81■■□□□ 1.4
PRDM4-205ENST00000550376 GH2P01242 217 aa23.8■■□□□ 1.4
PRDM4-205ENST00000550376 MTRQ99707 1265 aa23.8■■□□□ 1.4
PRDM4-205ENST00000550376 VEZTQ9HBM0 779 aa23.8■■□□□ 1.4
PRDM4-205ENST00000550376 TAL1P17542 331 aaPredicted RBP23.8■■□□□ 1.4
PRDM4-205ENST00000550376 CACTINQ8WUQ7 758 aaKnown RBP23.8■■□□□ 1.4
PRDM4-205ENST00000550376 SPDYE2BA6NHP3 402 aa23.79■■□□□ 1.4
PRDM4-205ENST00000550376 SPDYE6P0CI01 402 aa23.79■■□□□ 1.4
PRDM4-205ENST00000550376 GNA11P29992 359 aa23.79■■□□□ 1.4
PRDM4-205ENST00000550376 NONOQ15233 471 aaKnown RBP eCLIP23.79■■□□□ 1.4
PRDM4-205ENST00000550376 GALNT17Q6IS24 598 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms