RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 SLC1A4P43007 532 aa13.2□□□□□ -0.3
RAB5B-208ENST00000550283 PLS1Q14651 629 aa13.2□□□□□ -0.3
RAB5B-208ENST00000550283 NPLOC4Q8TAT6 608 aa13.2□□□□□ -0.3
RAB5B-208ENST00000550283 LRRC2Q9BYS8 371 aa13.2□□□□□ -0.3
RAB5B-208ENST00000550283 RAVER2Q9HCJ3 691 aaKnown RBP13.2□□□□□ -0.3
RAB5B-208ENST00000550283 ADCY3O60266 1144 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 COBLO75128 1261 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 CPA1P15085 419 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 CYP2B6P20813 491 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 PTPREP23469 700 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 CCDC96Q2M329 555 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 WDR78Q5VTH9 848 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 KIAA1211Q6ZU35 1233 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 PLEKHH3Q7Z736 793 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 DGKHQ86XP1 1220 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 CPXCR1Q8N123 301 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 STAG2Q8N3U4 1231 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 RAET1EQ8TD07 263 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 IGDCC4Q8TDY8 1250 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 GTF3C2Q8WUA4 911 aaPredicted RBP13.19□□□□□ -0.3
RAB5B-208ENST00000550283 TRIB2Q92519 343 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 AGBL1Q96MI9 1066 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 TCEANC2Q96MN5 208 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 KRT23Q9C075 422 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 UBA5Q9GZZ9 404 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 SLC38A10Q9HBR0 1119 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 FEM1BQ9UK73 627 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 PRR12Q9ULL5 1215 aa13.19□□□□□ -0.3
RAB5B-208ENST00000550283 ISY1Q9ULR0 285 aaKnown RBP13.19□□□□□ -0.3
RAB5B-208ENST00000550283 MKI67P46013 3256 aaKnown RBP13.18□□□□□ -0.3
RAB5B-208ENST00000550283 GNRH1P01148 92 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 MAPK4P31152 587 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 GRK4P32298 578 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 ZNF543Q08ER8 600 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 IRF5Q13568 498 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 GRB14Q14449 540 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 SLC9C1Q4G0N8 1177 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 PRPF38BQ5VTL8 546 aaKnown RBP13.18□□□□□ -0.3
RAB5B-208ENST00000550283 NCAPG2Q86XI2 1143 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 RIOX2Q8IUF8 465 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 PRPF38AQ8NAV1 312 aaKnown RBP13.18□□□□□ -0.3
RAB5B-208ENST00000550283 PNMA1Q8ND90 353 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 DCAF4Q8WV16 495 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 COA7Q96BR5 231 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 TTC14Q96N46 770 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 CNNM2Q9H8M5 875 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 SMCHD1A6NHR9 2005 aa13.18□□□□□ -0.3
RAB5B-208ENST00000550283 SEC24BO95487 1268 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 IGHA2P01877 340 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 INHAP05111 366 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 PGK2P07205 417 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 STAT3P40763 770 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 SLC4A3P48751 1232 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 STAT2P52630 851 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 SNRNP48Q6IEG0 339 aaKnown RBP13.17□□□□□ -0.3
RAB5B-208ENST00000550283 CCDC174Q6PII3 467 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 BTNL9Q6UXG8 535 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 MB21D1Q8N884 522 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 KCNB2Q92953 911 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 MYL10Q9BUA6 226 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 UNC93B1Q9H1C4 597 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 LY9Q9HBG7 655 aa13.17□□□□□ -0.3
RAB5B-208ENST00000550283 DDX49Q9Y6V7 483 aaKnown RBP13.17□□□□□ -0.3
RAB5B-208ENST00000550283 IFIT3O14879 490 aaKnown RBP13.16□□□□□ -0.3
RAB5B-208ENST00000550283 PRC1O43663 620 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 HOXD10P28358 340 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 ADORA2AP29274 412 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 PRMT2P55345 433 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 MAP2K5Q13163 448 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 MUM1L1Q5H9M0 696 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 NBPF11Q86T75 865 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 IQCA1Q86XH1 822 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 SHCBP1Q8NEM2 672 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 NCOA7Q8NI08 942 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 SHISA4Q96DD7 197 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 FGD4Q96M96 766 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 UBAC1Q9BSL1 405 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 KAT14Q9H8E8 782 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 SNX14Q9Y5W7 946 aa13.16□□□□□ -0.3
RAB5B-208ENST00000550283 SLC15A5A6NIM6 579 aa13.15□□□□□ -0.3
RAB5B-208ENST00000550283 SH2B2O14492 632 aaPredicted RBP13.15□□□□□ -0.3
RAB5B-208ENST00000550283 ATP2A1O14983 1001 aa13.15□□□□□ -0.3
RAB5B-208ENST00000550283 PLA2G6O60733 806 aa13.15□□□□□ -0.3
RAB5B-208ENST00000550283 EN2P19622 333 aaPredicted RBP13.15□□□□□ -0.3
RAB5B-208ENST00000550283 HSPA4P34932 840 aa13.15□□□□□ -0.3
RAB5B-208ENST00000550283 CCNA1P78396 465 aa13.15□□□□□ -0.3
RAB5B-208ENST00000550283 IKQ13123 557 aaPredicted RBP13.15□□□□□ -0.3
RAB5B-208ENST00000550283 ARHGEF6Q15052 776 aa13.15□□□□□ -0.3
RAB5B-208ENST00000550283 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.3
RAB5B-208ENST00000550283 IFIT1BQ5T764 474 aaKnown RBP13.15□□□□□ -0.3
RAB5B-208ENST00000550283 SYDE2Q5VT97 1194 aa13.15□□□□□ -0.3
RAB5B-208ENST00000550283 RALYLQ86SE5 291 aaKnown RBP13.15□□□□□ -0.3
RAB5B-208ENST00000550283 FAM160B2Q86V87 743 aa13.15□□□□□ -0.3
RAB5B-208ENST00000550283 TRPV1Q8NER1 839 aa13.15□□□□□ -0.3
RAB5B-208ENST00000550283 PURBQ96QR8 312 aaKnown RBP13.15□□□□□ -0.3
RAB5B-208ENST00000550283 NUDT12Q9BQG2 462 aa13.15□□□□□ -0.3
RAB5B-208ENST00000550283 TEX13BQ9BXU2 312 aa13.15□□□□□ -0.3
RAB5B-208ENST00000550283 RANBP17Q9H2T7 1088 aaKnown RBP13.15□□□□□ -0.3
RAB5B-208ENST00000550283 HOMER2Q9NSB8 354 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms