RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 MKNK2Q9HBH9 465 aa18.45■□□□□ 0.54
RAB5C-205ENST00000550013 EPB41L4AQ9HCS5 686 aaPredicted RBP18.45■□□□□ 0.54
RAB5C-205ENST00000550013 NYAP2Q9P242 653 aa18.45■□□□□ 0.54
RAB5C-205ENST00000550013 PQBP1O60828 265 aaKnown RBP18.44■□□□□ 0.54
RAB5C-205ENST00000550013 ADAMTS4O75173 837 aa18.44■□□□□ 0.54
RAB5C-205ENST00000550013 CLTBP09497 229 aa18.44■□□□□ 0.54
RAB5C-205ENST00000550013 AKR1A1P14550 325 aa18.44■□□□□ 0.54
RAB5C-205ENST00000550013 SLC4A3P48751 1232 aa18.44■□□□□ 0.54
RAB5C-205ENST00000550013 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.44■□□□□ 0.54
RAB5C-205ENST00000550013 KBTBD3Q8NAB2 608 aa18.44■□□□□ 0.54
RAB5C-205ENST00000550013 CNPY2Q9Y2B0 182 aa18.44■□□□□ 0.54
RAB5C-205ENST00000550013 PRUNE2Q8WUY3 3088 aa18.44■□□□□ 0.54
RAB5C-205ENST00000550013 PRDM1O75626 825 aa18.43■□□□□ 0.54
RAB5C-205ENST00000550013 SNAI1O95863 264 aaPredicted RBP18.43■□□□□ 0.54
RAB5C-205ENST00000550013 EPHB4P54760 987 aa18.43■□□□□ 0.54
RAB5C-205ENST00000550013 GIMAP6Q6P9H5 292 aa18.43■□□□□ 0.54
RAB5C-205ENST00000550013 APPBP2Q92624 585 aa18.43■□□□□ 0.54
RAB5C-205ENST00000550013 CDX2Q99626 313 aaPredicted RBP18.43■□□□□ 0.54
RAB5C-205ENST00000550013 SEMA6BQ9H3T3 888 aa18.43■□□□□ 0.54
RAB5C-205ENST00000550013 CLIP2Q9UDT6 1046 aa18.43■□□□□ 0.54
RAB5C-205ENST00000550013 TACC3Q9Y6A5 838 aa18.43■□□□□ 0.54
RAB5C-205ENST00000550013 SYNRGQ9UMZ2 1314 aa18.43■□□□□ 0.54
RAB5C-205ENST00000550013 DNAJC25-GNG10A0A024R161 153 aa18.42■□□□□ 0.54
RAB5C-205ENST00000550013 IGKV6D-41A0A0C4DH26 115 aa18.42■□□□□ 0.54
RAB5C-205ENST00000550013 M0R2C6 588 aa18.42■□□□□ 0.54
RAB5C-205ENST00000550013 KIAA0355O15063 1070 aa18.42■□□□□ 0.54
RAB5C-205ENST00000550013 RNF113AO15541 343 aaKnown RBP18.42■□□□□ 0.54
RAB5C-205ENST00000550013 GPAA1O43292 621 aa18.42■□□□□ 0.54
RAB5C-205ENST00000550013 CPXCR1Q8N123 301 aa18.42■□□□□ 0.54
RAB5C-205ENST00000550013 PRPF38AQ8NAV1 312 aaKnown RBP18.42■□□□□ 0.54
RAB5C-205ENST00000550013 DDX11Q96FC9 970 aa18.42■□□□□ 0.54
RAB5C-205ENST00000550013 COL25A1Q9BXS0 654 aaPredicted RBP18.42■□□□□ 0.54
RAB5C-205ENST00000550013 TTYH1Q9H313 450 aaPredicted RBP18.42■□□□□ 0.54
RAB5C-205ENST00000550013 ZHX1Q9UKY1 873 aaPredicted RBP18.42■□□□□ 0.54
RAB5C-205ENST00000550013 TDO2P48775 406 aa18.41■□□□□ 0.54
RAB5C-205ENST00000550013 ACLYP53396 1101 aa18.41■□□□□ 0.54
RAB5C-205ENST00000550013 IRX5P78411 483 aaPredicted RBP18.41■□□□□ 0.54
RAB5C-205ENST00000550013 SMAD3P84022 425 aaKnown RBP18.41■□□□□ 0.54
RAB5C-205ENST00000550013 MSL3Q8N5Y2 521 aaKnown RBP18.41■□□□□ 0.54
RAB5C-205ENST00000550013 KIFC2Q96AC6 838 aa18.41■□□□□ 0.54
RAB5C-205ENST00000550013 RAVER2Q9HCJ3 691 aaKnown RBP18.41■□□□□ 0.54
RAB5C-205ENST00000550013 FAM184BQ9ULE4 1060 aa18.41■□□□□ 0.54
RAB5C-205ENST00000550013 SYNGAP1Q96PV0 1343 aa18.41■□□□□ 0.54
RAB5C-205ENST00000550013 CDH23Q9H251 3354 aa18.41■□□□□ 0.54
RAB5C-205ENST00000550013 MYADML2A6NDP7 307 aa18.4■□□□□ 0.54
RAB5C-205ENST00000550013 ZBED4O75132 1171 aa18.4■□□□□ 0.54
RAB5C-205ENST00000550013 RAG1P15918 1043 aa18.4■□□□□ 0.54
RAB5C-205ENST00000550013 MAMDC4Q6UXC1 1216 aa18.4■□□□□ 0.54
RAB5C-205ENST00000550013 LRRC47Q8N1G4 583 aaKnown RBP18.4■□□□□ 0.54
RAB5C-205ENST00000550013 KLHDC9Q8NEP7 349 aa18.4■□□□□ 0.54
RAB5C-205ENST00000550013 MYLIPQ8WY64 445 aa18.4■□□□□ 0.54
RAB5C-205ENST00000550013 CEP95Q96GE4 821 aa18.4■□□□□ 0.54
RAB5C-205ENST00000550013 GPATCH3Q96I76 525 aa18.4■□□□□ 0.54
RAB5C-205ENST00000550013 RNPC3Q96LT9 517 aaKnown RBP18.4■□□□□ 0.54
RAB5C-205ENST00000550013 TSEN34Q9BSV6 310 aaKnown RBP18.4■□□□□ 0.54
RAB5C-205ENST00000550013 DCTPP1Q9H773 170 aa18.4■□□□□ 0.54
RAB5C-205ENST00000550013 SLC38A10Q9HBR0 1119 aa18.4■□□□□ 0.54
RAB5C-205ENST00000550013 STARD7Q9NQZ5 370 aa18.4■□□□□ 0.54
RAB5C-205ENST00000550013 TMEM39AQ9NV64 488 aa18.4■□□□□ 0.54
RAB5C-205ENST00000550013 ATP2A1O14983 1001 aa18.39■□□□□ 0.53
RAB5C-205ENST00000550013 ADCY6O43306 1168 aa18.39■□□□□ 0.53
RAB5C-205ENST00000550013 APPP05067 770 aa18.39■□□□□ 0.53
RAB5C-205ENST00000550013 FAAP100Q0VG06 881 aa18.39■□□□□ 0.53
RAB5C-205ENST00000550013 KCNA10Q16322 511 aa18.39■□□□□ 0.53
RAB5C-205ENST00000550013 ZNF444Q8N0Y2 327 aaPredicted RBP18.39■□□□□ 0.53
RAB5C-205ENST00000550013 FGD4Q96M96 766 aa18.39■□□□□ 0.53
RAB5C-205ENST00000550013 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.39■□□□□ 0.53
RAB5C-205ENST00000550013 MTMR4Q9NYA4 1195 aa18.39■□□□□ 0.53
RAB5C-205ENST00000550013 CTDP1Q9Y5B0 961 aaPredicted RBP18.39■□□□□ 0.53
RAB5C-205ENST00000550013 ZFYP08048 801 aaPredicted RBP18.38■□□□□ 0.53
RAB5C-205ENST00000550013 GNAT2P19087 354 aa18.38■□□□□ 0.53
RAB5C-205ENST00000550013 FPGSQ05932 587 aa18.38■□□□□ 0.53
RAB5C-205ENST00000550013 ACVR2BQ13705 512 aa18.38■□□□□ 0.53
RAB5C-205ENST00000550013 CCSAPQ6IQ19 270 aaPredicted RBP18.38■□□□□ 0.53
RAB5C-205ENST00000550013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.38■□□□□ 0.53
RAB5C-205ENST00000550013 ANKRD33Q7Z3H0 272 aa18.38■□□□□ 0.53
RAB5C-205ENST00000550013 ZNF467Q7Z7K2 595 aaPredicted RBP18.38■□□□□ 0.53
RAB5C-205ENST00000550013 MAFAQ8NHW3 353 aaPredicted RBP18.38■□□□□ 0.53
RAB5C-205ENST00000550013 MKL1Q969V6 931 aa18.38■□□□□ 0.53
RAB5C-205ENST00000550013 SEC62Q99442 399 aaKnown RBP18.38■□□□□ 0.53
RAB5C-205ENST00000550013 FEM1BQ9UK73 627 aa18.38■□□□□ 0.53
RAB5C-205ENST00000550013 MOXD2PA6NHM9 499 aa18.37■□□□□ 0.53
RAB5C-205ENST00000550013 DUSP11O75319 330 aaKnown RBP18.37■□□□□ 0.53
RAB5C-205ENST00000550013 IFNL3Q8IZI9 196 aa18.37■□□□□ 0.53
RAB5C-205ENST00000550013 ANKRD35Q8N283 1001 aa18.37■□□□□ 0.53
RAB5C-205ENST00000550013 GMCL1P1Q8NEA9 526 aa18.37■□□□□ 0.53
RAB5C-205ENST00000550013 NUP133Q8WUM0 1156 aa18.37■□□□□ 0.53
RAB5C-205ENST00000550013 CHMP4CQ96CF2 233 aa18.37■□□□□ 0.53
RAB5C-205ENST00000550013 TOX2Q96NM4 488 aa18.37■□□□□ 0.53
RAB5C-205ENST00000550013 VCANP13611 3396 aa18.37■□□□□ 0.53
RAB5C-205ENST00000550013 DCDC2CA8MYV0 355 aa18.36■□□□□ 0.53
RAB5C-205ENST00000550013 PATL2C9JE40 543 aaKnown RBP18.36■□□□□ 0.53
RAB5C-205ENST00000550013 TTLL1O95922 423 aa18.36■□□□□ 0.53
RAB5C-205ENST00000550013 CCDC144BQ3MJ40 725 aa18.36■□□□□ 0.53
RAB5C-205ENST00000550013 SLFN13Q68D06 897 aa18.36■□□□□ 0.53
RAB5C-205ENST00000550013 PLIN4Q96Q06 1357 aa18.36■□□□□ 0.53
RAB5C-205ENST00000550013 ZNF287Q9HBT7 754 aa18.36■□□□□ 0.53
RAB5C-205ENST00000550013 HOMER2Q9NSB8 354 aa18.36■□□□□ 0.53
RAB5C-205ENST00000550013 C6orf222P0C671 652 aaPredicted RBP18.35■□□□□ 0.53
RAB5C-205ENST00000550013 BMP3P12645 472 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms