RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 DNAH12Q6ZR08 3092 aa19.38■□□□□ 0.69
VPS29-207ENST00000549970 CPXCR1Q8N123 301 aa19.38■□□□□ 0.69
VPS29-207ENST00000549970 TEX13BQ9BXU2 312 aa19.38■□□□□ 0.69
VPS29-207ENST00000549970 ZMYND8Q9ULU4 1186 aaPredicted RBP19.38■□□□□ 0.69
VPS29-207ENST00000549970 SYNPO2Q9UMS6 1093 aa19.38■□□□□ 0.69
VPS29-207ENST00000549970 STX8Q9UNK0 236 aa19.38■□□□□ 0.69
VPS29-207ENST00000549970 ZBED4O75132 1171 aa19.37■□□□□ 0.69
VPS29-207ENST00000549970 COL6A1P12109 1028 aa19.37■□□□□ 0.69
VPS29-207ENST00000549970 ZNF589Q86UQ0 364 aaPredicted RBP19.37■□□□□ 0.69
VPS29-207ENST00000549970 PLEKHM2Q8IWE5 1019 aa19.37■□□□□ 0.69
VPS29-207ENST00000549970 CHMP4CQ96CF2 233 aa19.37■□□□□ 0.69
VPS29-207ENST00000549970 FEM1BQ9UK73 627 aa19.37■□□□□ 0.69
VPS29-207ENST00000549970 SUPT16HQ9Y5B9 1047 aaKnown RBP19.37■□□□□ 0.69
VPS29-207ENST00000549970 TACC3Q9Y6A5 838 aa19.37■□□□□ 0.69
VPS29-207ENST00000549970 PLXNA1Q9UIW2 1896 aa19.37■□□□□ 0.69
VPS29-207ENST00000549970 RANBP6O60518 1105 aaKnown RBP19.36■□□□□ 0.69
VPS29-207ENST00000549970 NMT2O60551 498 aa19.36■□□□□ 0.69
VPS29-207ENST00000549970 BMP3P12645 472 aa19.36■□□□□ 0.69
VPS29-207ENST00000549970 ALX1Q15699 326 aa19.36■□□□□ 0.69
VPS29-207ENST00000549970 PRO3102Q9H379 93 aa19.36■□□□□ 0.69
VPS29-207ENST00000549970 RAVER2Q9HCJ3 691 aaKnown RBP19.36■□□□□ 0.69
VPS29-207ENST00000549970 TOMM22Q9NS69 142 aa19.36■□□□□ 0.69
VPS29-207ENST00000549970 ANAPC4Q9UJX5 808 aa19.36■□□□□ 0.69
VPS29-207ENST00000549970 RIPK3Q9Y572 518 aa19.36■□□□□ 0.69
VPS29-207ENST00000549970 CCDC171Q6TFL3 1326 aa19.35■□□□□ 0.69
VPS29-207ENST00000549970 TMEM232C9JQI7 657 aa19.35■□□□□ 0.69
VPS29-207ENST00000549970 SEPT4O43236 478 aa19.35■□□□□ 0.69
VPS29-207ENST00000549970 FGAP02671 866 aa19.35■□□□□ 0.69
VPS29-207ENST00000549970 HSPD1P10809 573 aaKnown RBP19.35■□□□□ 0.69
VPS29-207ENST00000549970 SYN1P17600 705 aa19.35■□□□□ 0.69
VPS29-207ENST00000549970 ZNF792Q3KQV3 632 aa19.35■□□□□ 0.69
VPS29-207ENST00000549970 PPP4R3BQ5MIZ7 849 aa19.35■□□□□ 0.69
VPS29-207ENST00000549970 TICAM2Q86XR7 235 aa19.35■□□□□ 0.69
VPS29-207ENST00000549970 SENP6Q9GZR1 1112 aaPredicted RBP19.35■□□□□ 0.69
VPS29-207ENST00000549970 SLC38A10Q9HBR0 1119 aa19.35■□□□□ 0.69
VPS29-207ENST00000549970 IL17RBQ9NRM6 502 aa19.35■□□□□ 0.69
VPS29-207ENST00000549970 MYCNP04198 464 aaPredicted RBP19.34■□□□□ 0.69
VPS29-207ENST00000549970 MCCP23508 829 aa19.34■□□□□ 0.69
VPS29-207ENST00000549970 SLC1A4P43007 532 aa19.34■□□□□ 0.69
VPS29-207ENST00000549970 IKQ13123 557 aaPredicted RBP19.34■□□□□ 0.69
VPS29-207ENST00000549970 LRRC26Q2I0M4 334 aa19.34■□□□□ 0.69
VPS29-207ENST00000549970 RRP12Q5JTH9 1297 aaKnown RBP19.34■□□□□ 0.69
VPS29-207ENST00000549970 GJC2Q5T442 439 aaPredicted RBP19.34■□□□□ 0.69
VPS29-207ENST00000549970 TINF2Q9BSI4 451 aa19.34■□□□□ 0.69
VPS29-207ENST00000549970 SZT2Q5T011 3432 aa19.33■□□□□ 0.69
VPS29-207ENST00000549970 DNM1LO00429 736 aa19.33■□□□□ 0.68
VPS29-207ENST00000549970 ATP2A1O14983 1001 aa19.33■□□□□ 0.68
VPS29-207ENST00000549970 ORC4O43929 436 aa19.33■□□□□ 0.68
VPS29-207ENST00000549970 SDSP20132 328 aa19.33■□□□□ 0.68
VPS29-207ENST00000549970 STAT2P52630 851 aa19.33■□□□□ 0.68
VPS29-207ENST00000549970 HAND2P61296 217 aa19.33■□□□□ 0.68
VPS29-207ENST00000549970 DDX11Q96FC9 970 aa19.33■□□□□ 0.68
VPS29-207ENST00000549970 GMCL1Q96IK5 515 aa19.33■□□□□ 0.68
VPS29-207ENST00000549970 OSBPL3Q9H4L5 887 aa19.33■□□□□ 0.68
VPS29-207ENST00000549970 MTMR7Q9Y216 660 aa19.33■□□□□ 0.68
VPS29-207ENST00000549970 DIS3Q9Y2L1 958 aaKnown RBP19.33■□□□□ 0.68
VPS29-207ENST00000549970 ATN1P54259 1190 aaPredicted RBP19.32■□□□□ 0.68
VPS29-207ENST00000549970 KCTD1Q719H9 257 aa19.32■□□□□ 0.68
VPS29-207ENST00000549970 RASGRP2Q7LDG7 609 aa19.32■□□□□ 0.68
VPS29-207ENST00000549970 ARRDC4Q8NCT1 418 aa19.32■□□□□ 0.68
VPS29-207ENST00000549970 PCDH10Q9P2E7 1040 aa19.32■□□□□ 0.68
VPS29-207ENST00000549970 LAMA3Q16787 3333 aa19.32■□□□□ 0.68
VPS29-207ENST00000549970 SMCHD1A6NHR9 2005 aa19.32■□□□□ 0.68
VPS29-207ENST00000549970 ZMYM6O95789 1325 aa19.31■□□□□ 0.68
VPS29-207ENST00000549970 FGRP09769 529 aa19.31■□□□□ 0.68
VPS29-207ENST00000549970 OAZ1P54368 228 aa19.31■□□□□ 0.68
VPS29-207ENST00000549970 FAM160B2Q86V87 743 aa19.31■□□□□ 0.68
VPS29-207ENST00000549970 CHURC1Q8WUH1 139 aa19.31■□□□□ 0.68
VPS29-207ENST00000549970 STAG1Q8WVM7 1258 aa19.31■□□□□ 0.68
VPS29-207ENST00000549970 HOMER2Q9NSB8 354 aa19.31■□□□□ 0.68
VPS29-207ENST00000549970 KBTBD13C9JR72 458 aa19.3■□□□□ 0.68
VPS29-207ENST00000549970 TAL1P17542 331 aaPredicted RBP19.3■□□□□ 0.68
VPS29-207ENST00000549970 MFAP1P55081 439 aaKnown RBP19.3■□□□□ 0.68
VPS29-207ENST00000549970 IRX6P78412 446 aaPredicted RBP19.3■□□□□ 0.68
VPS29-207ENST00000549970 CWC27Q6UX04 472 aaKnown RBP19.3■□□□□ 0.68
VPS29-207ENST00000549970 ANKRD35Q8N283 1001 aa19.3■□□□□ 0.68
VPS29-207ENST00000549970 GDF15Q99988 308 aa19.3■□□□□ 0.68
VPS29-207ENST00000549970 DIAPH3Q9NSV4 1193 aa19.3■□□□□ 0.68
VPS29-207ENST00000549970 NRBP1Q9UHY1 535 aa19.3■□□□□ 0.68
VPS29-207ENST00000549970 DNAJC25-GNG10A0A024R161 153 aa19.29■□□□□ 0.68
VPS29-207ENST00000549970 FDX1P10109 184 aa19.29■□□□□ 0.68
VPS29-207ENST00000549970 CCDC96Q2M329 555 aa19.29■□□□□ 0.68
VPS29-207ENST00000549970 RCSD1Q6JBY9 416 aa19.29■□□□□ 0.68
VPS29-207ENST00000549970 CHST13Q8NET6 341 aa19.29■□□□□ 0.68
VPS29-207ENST00000549970 FBXO40Q9UH90 709 aa19.29■□□□□ 0.68
VPS29-207ENST00000549970 CNPY2Q9Y2B0 182 aa19.29■□□□□ 0.68
VPS29-207ENST00000549970 ZNF865P0CJ78 1059 aaPredicted RBP19.28■□□□□ 0.68
VPS29-207ENST00000549970 RARBP10826 455 aa19.28■□□□□ 0.68
VPS29-207ENST00000549970 MAGEA10P43363 369 aaPredicted RBP19.28■□□□□ 0.68
VPS29-207ENST00000549970 NOVP48745 357 aa19.28■□□□□ 0.68
VPS29-207ENST00000549970 SNAP25P60880 206 aa19.28■□□□□ 0.68
VPS29-207ENST00000549970 LRRC41Q15345 812 aa19.28■□□□□ 0.68
VPS29-207ENST00000549970 AKNAD1Q5T1N1 836 aa19.28■□□□□ 0.68
VPS29-207ENST00000549970 CCDC174Q6PII3 467 aa19.28■□□□□ 0.68
VPS29-207ENST00000549970 MFSD6Q6ZSS7 791 aa19.28■□□□□ 0.68
VPS29-207ENST00000549970 TBC1D10CQ8IV04 446 aa19.28■□□□□ 0.68
VPS29-207ENST00000549970 AGBL1Q96MI9 1066 aa19.28■□□□□ 0.68
VPS29-207ENST00000549970 XPNPEP3Q9NQH7 507 aa19.28■□□□□ 0.68
VPS29-207ENST00000549970 ZNF536O15090 1300 aa19.27■□□□□ 0.68
VPS29-207ENST00000549970 A0A1W2PPC1 479 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms