RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 SH3RF1Q7Z6J0 888 aa16.23■□□□□ 0.19
TROAP-211ENST00000549891 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.23■□□□□ 0.19
TROAP-211ENST00000549891 KBTBD3Q8NAB2 608 aa16.23■□□□□ 0.19
TROAP-211ENST00000549891 NUP133Q8WUM0 1156 aa16.23■□□□□ 0.19
TROAP-211ENST00000549891 TRIM43Q96BQ3 446 aaPredicted RBP16.23■□□□□ 0.19
TROAP-211ENST00000549891 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.23■□□□□ 0.19
TROAP-211ENST00000549891 GSG1L2A8MUP6 293 aa16.22■□□□□ 0.19
TROAP-211ENST00000549891 MINDY4BA8MYZ0 360 aa16.22■□□□□ 0.19
TROAP-211ENST00000549891 SMARCA5O60264 1052 aaPredicted RBP16.22■□□□□ 0.19
TROAP-211ENST00000549891 ZBED4O75132 1171 aa16.22■□□□□ 0.19
TROAP-211ENST00000549891 LRRFIP1Q32MZ4 808 aaKnown RBP16.22■□□□□ 0.19
TROAP-211ENST00000549891 ZNF444Q8N0Y2 327 aaPredicted RBP16.22■□□□□ 0.19
TROAP-211ENST00000549891 APPBP2Q92624 585 aa16.22■□□□□ 0.19
TROAP-211ENST00000549891 FAM184BQ9ULE4 1060 aa16.22■□□□□ 0.19
TROAP-211ENST00000549891 SYNPO2Q9UMS6 1093 aa16.22■□□□□ 0.19
TROAP-211ENST00000549891 MCM3APO60318 1980 aa16.22■□□□□ 0.19
TROAP-211ENST00000549891 MOXD2PA6NHM9 499 aa16.21■□□□□ 0.19
TROAP-211ENST00000549891 ATP2A1O14983 1001 aa16.21■□□□□ 0.19
TROAP-211ENST00000549891 KIAA0355O15063 1070 aa16.21■□□□□ 0.19
TROAP-211ENST00000549891 PQBP1O60828 265 aaKnown RBP16.21■□□□□ 0.19
TROAP-211ENST00000549891 NDUFB10O96000 172 aa16.21■□□□□ 0.19
TROAP-211ENST00000549891 RAG1P15918 1043 aa16.21■□□□□ 0.19
TROAP-211ENST00000549891 TAL1P17542 331 aaPredicted RBP16.21■□□□□ 0.19
TROAP-211ENST00000549891 TDO2P48775 406 aa16.21■□□□□ 0.19
TROAP-211ENST00000549891 MAMDC4Q6UXC1 1216 aa16.21■□□□□ 0.19
TROAP-211ENST00000549891 ZNF467Q7Z7K2 595 aaPredicted RBP16.21■□□□□ 0.19
TROAP-211ENST00000549891 TOX2Q96NM4 488 aa16.21■□□□□ 0.19
TROAP-211ENST00000549891 NUP88Q99567 741 aaPredicted RBP16.21■□□□□ 0.19
TROAP-211ENST00000549891 CDX2Q99626 313 aaPredicted RBP16.21■□□□□ 0.19
TROAP-211ENST00000549891 SEMA6BQ9H3T3 888 aa16.21■□□□□ 0.19
TROAP-211ENST00000549891 STARD7Q9NQZ5 370 aa16.21■□□□□ 0.19
TROAP-211ENST00000549891 TMEM39AQ9NV64 488 aa16.21■□□□□ 0.19
TROAP-211ENST00000549891 CLIP2Q9UDT6 1046 aa16.21■□□□□ 0.19
TROAP-211ENST00000549891 FBXO40Q9UH90 709 aa16.21■□□□□ 0.19
TROAP-211ENST00000549891 DCDC2CA8MYV0 355 aa16.2■□□□□ 0.18
TROAP-211ENST00000549891 RNF113AO15541 343 aaKnown RBP16.2■□□□□ 0.18
TROAP-211ENST00000549891 ADAMTS4O75173 837 aa16.2■□□□□ 0.18
TROAP-211ENST00000549891 APPP05067 770 aa16.2■□□□□ 0.18
TROAP-211ENST00000549891 ACLYP53396 1101 aa16.2■□□□□ 0.18
TROAP-211ENST00000549891 ANKRD33Q7Z3H0 272 aa16.2■□□□□ 0.18
TROAP-211ENST00000549891 CPXCR1Q8N123 301 aa16.2■□□□□ 0.18
TROAP-211ENST00000549891 STK11IPQ8N1F8 1099 aa16.2■□□□□ 0.18
TROAP-211ENST00000549891 OSBP2Q969R2 916 aa16.2■□□□□ 0.18
TROAP-211ENST00000549891 RNPC3Q96LT9 517 aaKnown RBP16.2■□□□□ 0.18
TROAP-211ENST00000549891 SPC25Q9HBM1 224 aa16.2■□□□□ 0.18
TROAP-211ENST00000549891 FEM1BQ9UK73 627 aa16.2■□□□□ 0.18
TROAP-211ENST00000549891 ZHX1Q9UKY1 873 aaPredicted RBP16.2■□□□□ 0.18
TROAP-211ENST00000549891 MROH7Q68CQ1 1323 aa16.19■□□□□ 0.18
TROAP-211ENST00000549891 SYNRGQ9UMZ2 1314 aa16.19■□□□□ 0.18
TROAP-211ENST00000549891 DNAJC25-GNG10A0A024R161 153 aa16.19■□□□□ 0.18
TROAP-211ENST00000549891 TMEM265A0A087WTH1 108 aa16.19■□□□□ 0.18
TROAP-211ENST00000549891 GPAA1O43292 621 aa16.19■□□□□ 0.18
TROAP-211ENST00000549891 DUSP11O75319 330 aaKnown RBP16.19■□□□□ 0.18
TROAP-211ENST00000549891 SLC4A3P48751 1232 aa16.19■□□□□ 0.18
TROAP-211ENST00000549891 OAZ1P54368 228 aa16.19■□□□□ 0.18
TROAP-211ENST00000549891 FPGSQ05932 587 aa16.19■□□□□ 0.18
TROAP-211ENST00000549891 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.19■□□□□ 0.18
TROAP-211ENST00000549891 ANKRD35Q8N283 1001 aa16.19■□□□□ 0.18
TROAP-211ENST00000549891 MKL1Q969V6 931 aa16.19■□□□□ 0.18
TROAP-211ENST00000549891 KIFC2Q96AC6 838 aa16.19■□□□□ 0.18
TROAP-211ENST00000549891 IGKV6D-41A0A0C4DH26 115 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 SNAI1O95863 264 aaPredicted RBP16.18■□□□□ 0.18
TROAP-211ENST00000549891 TTLL1O95922 423 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 SLC3A2P08195 630 aaKnown RBP16.18■□□□□ 0.18
TROAP-211ENST00000549891 FDX1P10109 184 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 PCSK9Q8NBP7 692 aaKnown RBP16.18■□□□□ 0.18
TROAP-211ENST00000549891 GMCL1P1Q8NEA9 526 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 CHST13Q8NET6 341 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 LENG1Q96BZ8 264 aaPredicted RBP16.18■□□□□ 0.18
TROAP-211ENST00000549891 CEP95Q96GE4 821 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 GLT1D1Q96MS3 346 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 COL25A1Q9BXS0 654 aaPredicted RBP16.18■□□□□ 0.18
TROAP-211ENST00000549891 NACAP1Q9BZK3 213 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 ABHD16BQ9H3Z7 469 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 DCTPP1Q9H773 170 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 SLC38A10Q9HBR0 1119 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 MTMR4Q9NYA4 1195 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 RIPK3Q9Y572 518 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 ELP1O95163 1332 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 EYSQ5T1H1 3165 aa16.18■□□□□ 0.18
TROAP-211ENST00000549891 PATL2C9JE40 543 aaKnown RBP16.17■□□□□ 0.18
TROAP-211ENST00000549891 ITGB8P26012 769 aa16.17■□□□□ 0.18
TROAP-211ENST00000549891 CST5P28325 142 aaPredicted RBP16.17■□□□□ 0.18
TROAP-211ENST00000549891 PDE4BQ07343 736 aa16.17■□□□□ 0.18
TROAP-211ENST00000549891 FAAP100Q0VG06 881 aa16.17■□□□□ 0.18
TROAP-211ENST00000549891 ACVR2BQ13705 512 aa16.17■□□□□ 0.18
TROAP-211ENST00000549891 KCNA10Q16322 511 aa16.17■□□□□ 0.18
TROAP-211ENST00000549891 PPP4R3BQ5MIZ7 849 aa16.17■□□□□ 0.18
TROAP-211ENST00000549891 KLHDC9Q8NEP7 349 aa16.17■□□□□ 0.18
TROAP-211ENST00000549891 MAFAQ8NHW3 353 aaPredicted RBP16.17■□□□□ 0.18
TROAP-211ENST00000549891 RAVER2Q9HCJ3 691 aaKnown RBP16.17■□□□□ 0.18
TROAP-211ENST00000549891 EPB41L4AQ9HCS5 686 aaPredicted RBP16.17■□□□□ 0.18
TROAP-211ENST00000549891 ERC2O15083 957 aa16.16■□□□□ 0.18
TROAP-211ENST00000549891 PRDM1O75626 825 aa16.16■□□□□ 0.18
TROAP-211ENST00000549891 C6orf222P0C671 652 aaPredicted RBP16.16■□□□□ 0.18
TROAP-211ENST00000549891 TSPY3P0CV98 308 aa16.16■□□□□ 0.18
TROAP-211ENST00000549891 TSPY8P0CW00 308 aa16.16■□□□□ 0.18
TROAP-211ENST00000549891 BMP3P12645 472 aa16.16■□□□□ 0.18
TROAP-211ENST00000549891 C20orf194Q5TEA3 1177 aa16.16■□□□□ 0.18
TROAP-211ENST00000549891 CCSAPQ6IQ19 270 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms