RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 CNGA1P29973 690 aa28.6■■■□□ 2.17
USP44-205ENST00000549639 GMCL1Q96IK5 515 aa28.6■■■□□ 2.17
USP44-205ENST00000549639 MAML3Q96JK9 1138 aa28.6■■■□□ 2.17
USP44-205ENST00000549639 CCDC171Q6TFL3 1326 aa28.6■■■□□ 2.17
USP44-205ENST00000549639 HIP1O00291 1037 aa28.59■■■□□ 2.17
USP44-205ENST00000549639 SDSP20132 328 aa28.59■■■□□ 2.17
USP44-205ENST00000549639 OAZ1P54368 228 aa28.59■■■□□ 2.17
USP44-205ENST00000549639 NRBP1Q9UHY1 535 aa28.59■■■□□ 2.17
USP44-205ENST00000549639 RANBP6O60518 1105 aaKnown RBP28.58■■■□□ 2.17
USP44-205ENST00000549639 PCP11498 1178 aaKnown RBP28.58■■■□□ 2.17
USP44-205ENST00000549639 COL6A1P12109 1028 aa28.58■■■□□ 2.17
USP44-205ENST00000549639 SNRNP48Q6IEG0 339 aaKnown RBP28.58■■■□□ 2.17
USP44-205ENST00000549639 KIFC2Q96AC6 838 aa28.58■■■□□ 2.17
USP44-205ENST00000549639 SLC38A10Q9HBR0 1119 aa28.58■■■□□ 2.17
USP44-205ENST00000549639 STX8Q9UNK0 236 aa28.58■■■□□ 2.17
USP44-205ENST00000549639 ZNF589Q86UQ0 364 aaPredicted RBP28.57■■■□□ 2.16
USP44-205ENST00000549639 FAM160B2Q86V87 743 aa28.57■■■□□ 2.16
USP44-205ENST00000549639 CHURC1Q8WUH1 139 aa28.57■■■□□ 2.16
USP44-205ENST00000549639 ZNFX1Q9P2E3 1918 aaKnown RBP28.57■■■□□ 2.16
USP44-205ENST00000549639 SEPT4O43236 478 aa28.56■■■□□ 2.16
USP44-205ENST00000549639 PLA2G6O60733 806 aa28.56■■■□□ 2.16
USP44-205ENST00000549639 NOVP48745 357 aa28.56■■■□□ 2.16
USP44-205ENST00000549639 ZNF792Q3KQV3 632 aa28.56■■■□□ 2.16
USP44-205ENST00000549639 CHRDL2Q6WN34 429 aa28.56■■■□□ 2.16
USP44-205ENST00000549639 TRPV1Q8NER1 839 aa28.56■■■□□ 2.16
USP44-205ENST00000549639 IL17RBQ9NRM6 502 aa28.56■■■□□ 2.16
USP44-205ENST00000549639 FBXO40Q9UH90 709 aa28.56■■■□□ 2.16
USP44-205ENST00000549639 SLC1A4P43007 532 aa28.55■■■□□ 2.16
USP44-205ENST00000549639 NT5C2P49902 561 aa28.55■■■□□ 2.16
USP44-205ENST00000549639 STAT2P52630 851 aa28.55■■■□□ 2.16
USP44-205ENST00000549639 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.55■■■□□ 2.16
USP44-205ENST00000549639 DIAPH3Q9NSV4 1193 aa28.55■■■□□ 2.16
USP44-205ENST00000549639 PFASO15067 1338 aa28.54■■■□□ 2.16
USP44-205ENST00000549639 TMEM232C9JQI7 657 aa28.54■■■□□ 2.16
USP44-205ENST00000549639 CPXCR1Q8N123 301 aa28.54■■■□□ 2.16
USP44-205ENST00000549639 MSL3Q8N5Y2 521 aaKnown RBP28.54■■■□□ 2.16
USP44-205ENST00000549639 ARRDC4Q8NCT1 418 aa28.54■■■□□ 2.16
USP44-205ENST00000549639 STAG1Q8WVM7 1258 aa28.54■■■□□ 2.16
USP44-205ENST00000549639 TINF2Q9BSI4 451 aa28.54■■■□□ 2.16
USP44-205ENST00000549639 INCENPQ9NQS7 918 aa28.54■■■□□ 2.16
USP44-205ENST00000549639 TOMM22Q9NS69 142 aa28.54■■■□□ 2.16
USP44-205ENST00000549639 TCP11L1Q9NUJ3 509 aa28.54■■■□□ 2.16
USP44-205ENST00000549639 FRMPD3Q5JV73 1810 aa28.53■■■□□ 2.16
USP44-205ENST00000549639 DNM1LO00429 736 aa28.53■■■□□ 2.16
USP44-205ENST00000549639 PGK2P07205 417 aa28.53■■■□□ 2.16
USP44-205ENST00000549639 CHST13Q8NET6 341 aa28.53■■■□□ 2.16
USP44-205ENST00000549639 DDX11Q96FC9 970 aa28.53■■■□□ 2.16
USP44-205ENST00000549639 RNF41Q9H4P4 317 aaPredicted RBP28.53■■■□□ 2.16
USP44-205ENST00000549639 ALPK3Q96L96 1907 aa28.52■■■□□ 2.16
USP44-205ENST00000549639 MCCP23508 829 aa28.52■■■□□ 2.16
USP44-205ENST00000549639 RCSD1Q6JBY9 416 aa28.52■■■□□ 2.16
USP44-205ENST00000549639 ISY1Q9ULR0 285 aaKnown RBP28.52■■■□□ 2.16
USP44-205ENST00000549639 RIPK3Q9Y572 518 aa28.52■■■□□ 2.16
USP44-205ENST00000549639 TACC3Q9Y6A5 838 aa28.52■■■□□ 2.16
USP44-205ENST00000549639 NMT2O60551 498 aa28.51■■■□□ 2.15
USP44-205ENST00000549639 IKQ13123 557 aaPredicted RBP28.51■■■□□ 2.15
USP44-205ENST00000549639 AKNAD1Q5T1N1 836 aa28.51■■■□□ 2.15
USP44-205ENST00000549639 MFSD6Q6ZSS7 791 aa28.51■■■□□ 2.15
USP44-205ENST00000549639 C7orf61Q8IZ16 206 aa28.51■■■□□ 2.15
USP44-205ENST00000549639 RAVER2Q9HCJ3 691 aaKnown RBP28.51■■■□□ 2.15
USP44-205ENST00000549639 RRP12Q5JTH9 1297 aaKnown RBP28.5■■■□□ 2.15
USP44-205ENST00000549639 CWC27Q6UX04 472 aaKnown RBP28.5■■■□□ 2.15
USP44-205ENST00000549639 DCAF4Q8WV16 495 aa28.5■■■□□ 2.15
USP44-205ENST00000549639 PRO3102Q9H379 93 aa28.5■■■□□ 2.15
USP44-205ENST00000549639 PLXNA1Q9UIW2 1896 aa28.49■■■□□ 2.15
USP44-205ENST00000549639 DNAJC25-GNG10A0A024R161 153 aa28.49■■■□□ 2.15
USP44-205ENST00000549639 A0A1W2PPC1 479 aa28.49■■■□□ 2.15
USP44-205ENST00000549639 TOP1P11387 765 aaKnown RBP28.49■■■□□ 2.15
USP44-205ENST00000549639 ZNF467Q7Z7K2 595 aaPredicted RBP28.49■■■□□ 2.15
USP44-205ENST00000549639 TTC14Q96N46 770 aa28.49■■■□□ 2.15
USP44-205ENST00000549639 RBM27Q9P2N5 1060 aaKnown RBP28.49■■■□□ 2.15
USP44-205ENST00000549639 ZNF213O14771 459 aa28.48■■■□□ 2.15
USP44-205ENST00000549639 TKFCQ3LXA3 575 aa28.48■■■□□ 2.15
USP44-205ENST00000549639 PRAMEF19Q5SWL8 479 aa28.48■■■□□ 2.15
USP44-205ENST00000549639 ANKRD35Q8N283 1001 aa28.48■■■□□ 2.15
USP44-205ENST00000549639 CNPY2Q9Y2B0 182 aa28.48■■■□□ 2.15
USP44-205ENST00000549639 SYNGAP1Q96PV0 1343 aa28.47■■■□□ 2.15
USP44-205ENST00000549639 KBTBD13C9JR72 458 aa28.47■■■□□ 2.15
USP44-205ENST00000549639 SLC4A3P48751 1232 aa28.47■■■□□ 2.15
USP44-205ENST00000549639 HAND2P61296 217 aa28.47■■■□□ 2.15
USP44-205ENST00000549639 MAMDC4Q6UXC1 1216 aa28.47■■■□□ 2.15
USP44-205ENST00000549639 SENP6Q9GZR1 1112 aaPredicted RBP28.47■■■□□ 2.15
USP44-205ENST00000549639 TRIOBPQ9H2D6 2365 aa28.46■■■□□ 2.15
USP44-205ENST00000549639 FXR1P51114 621 aaKnown RBP eCLIP28.46■■■□□ 2.15
USP44-205ENST00000549639 KCTD1Q719H9 257 aa28.46■■■□□ 2.15
USP44-205ENST00000549639 ESR2Q92731 530 aa28.46■■■□□ 2.15
USP44-205ENST00000549639 DSCC1Q9BVC3 393 aa28.46■■■□□ 2.15
USP44-205ENST00000549639 ACAD9Q9H845 621 aa28.46■■■□□ 2.15
USP44-205ENST00000549639 RARBP10826 455 aa28.45■■■□□ 2.14
USP44-205ENST00000549639 TMEM47Q9BQJ4 181 aa28.45■■■□□ 2.14
USP44-205ENST00000549639 CTNNA3Q9UI47 895 aa28.45■■■□□ 2.14
USP44-205ENST00000549639 RANBP2P49792 3224 aaKnown RBP28.44■■■□□ 2.14
USP44-205ENST00000549639 AKR1A1P14550 325 aa28.44■■■□□ 2.14
USP44-205ENST00000549639 LRRC26Q2I0M4 334 aa28.44■■■□□ 2.14
USP44-205ENST00000549639 CCDC178Q5BJE1 867 aa28.44■■■□□ 2.14
USP44-205ENST00000549639 PRR12Q9ULL5 1215 aa28.44■■■□□ 2.14
USP44-205ENST00000549639 ZNF536O15090 1300 aa28.43■■■□□ 2.14
USP44-205ENST00000549639 ZNF865P0CJ78 1059 aaPredicted RBP28.43■■■□□ 2.14
USP44-205ENST00000549639 BMP8BP34820 402 aa28.43■■■□□ 2.14
USP44-205ENST00000549639 CCDC96Q2M329 555 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms