RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 C7orf61Q8IZ16 206 aa23.17■■□□□ 1.3
ATF1-202ENST00000549612 DIS3Q9Y2L1 958 aaKnown RBP23.17■■□□□ 1.3
ATF1-202ENST00000549612 TACC3Q9Y6A5 838 aa23.17■■□□□ 1.3
ATF1-202ENST00000549612 TSPY2A6NKD2 308 aa23.16■■□□□ 1.3
ATF1-202ENST00000549612 ORC4O43929 436 aa23.16■■□□□ 1.3
ATF1-202ENST00000549612 PGK2P07205 417 aa23.16■■□□□ 1.3
ATF1-202ENST00000549612 FGRP09769 529 aa23.16■■□□□ 1.3
ATF1-202ENST00000549612 NMIQ13287 307 aaPredicted RBP23.16■■□□□ 1.3
ATF1-202ENST00000549612 ZNF792Q3KQV3 632 aa23.16■■□□□ 1.3
ATF1-202ENST00000549612 ZNF589Q86UQ0 364 aaPredicted RBP23.16■■□□□ 1.3
ATF1-202ENST00000549612 GMCL1Q96IK5 515 aa23.16■■□□□ 1.3
ATF1-202ENST00000549612 SLC38A10Q9HBR0 1119 aa23.16■■□□□ 1.3
ATF1-202ENST00000549612 INCENPQ9NQS7 918 aa23.16■■□□□ 1.3
ATF1-202ENST00000549612 SEPT4O43236 478 aa23.15■■□□□ 1.3
ATF1-202ENST00000549612 ZBED4O75132 1171 aa23.15■■□□□ 1.3
ATF1-202ENST00000549612 FGAP02671 866 aa23.15■■□□□ 1.3
ATF1-202ENST00000549612 HSPD1P10809 573 aaKnown RBP23.15■■□□□ 1.3
ATF1-202ENST00000549612 BMP3P12645 472 aa23.15■■□□□ 1.3
ATF1-202ENST00000549612 RILPL2Q969X0 211 aa23.15■■□□□ 1.3
ATF1-202ENST00000549612 KIFC2Q96AC6 838 aa23.15■■□□□ 1.3
ATF1-202ENST00000549612 IL17RBQ9NRM6 502 aa23.15■■□□□ 1.3
ATF1-202ENST00000549612 NRBP1Q9UHY1 535 aa23.15■■□□□ 1.3
ATF1-202ENST00000549612 RIPK3Q9Y572 518 aa23.15■■□□□ 1.3
ATF1-202ENST00000549612 CCDC171Q6TFL3 1326 aa23.14■■□□□ 1.3
ATF1-202ENST00000549612 NOVP48745 357 aa23.14■■□□□ 1.29
ATF1-202ENST00000549612 OAZ1P54368 228 aa23.14■■□□□ 1.29
ATF1-202ENST00000549612 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.14■■□□□ 1.29
ATF1-202ENST00000549612 STX8Q9UNK0 236 aa23.14■■□□□ 1.29
ATF1-202ENST00000549612 DNM1LO00429 736 aa23.13■■□□□ 1.29
ATF1-202ENST00000549612 RANBP6O60518 1105 aaKnown RBP23.13■■□□□ 1.29
ATF1-202ENST00000549612 FDX1P10109 184 aa23.13■■□□□ 1.29
ATF1-202ENST00000549612 PRAMEF19Q5SWL8 479 aa23.13■■□□□ 1.29
ATF1-202ENST00000549612 TINF2Q9BSI4 451 aa23.13■■□□□ 1.29
ATF1-202ENST00000549612 CTDP1Q9Y5B0 961 aaPredicted RBP23.13■■□□□ 1.29
ATF1-202ENST00000549612 SUPT16HQ9Y5B9 1047 aaKnown RBP23.13■■□□□ 1.29
ATF1-202ENST00000549612 ZNFX1Q9P2E3 1918 aaKnown RBP23.13■■□□□ 1.29
ATF1-202ENST00000549612 TMEM232C9JQI7 657 aa23.12■■□□□ 1.29
ATF1-202ENST00000549612 NMT2O60551 498 aa23.12■■□□□ 1.29
ATF1-202ENST00000549612 SDSP20132 328 aa23.12■■□□□ 1.29
ATF1-202ENST00000549612 SLC1A4P43007 532 aa23.12■■□□□ 1.29
ATF1-202ENST00000549612 STAT2P52630 851 aa23.12■■□□□ 1.29
ATF1-202ENST00000549612 LRRC26Q2I0M4 334 aa23.12■■□□□ 1.29
ATF1-202ENST00000549612 DNAH12Q6ZR08 3092 aa23.12■■□□□ 1.29
ATF1-202ENST00000549612 FAM160B2Q86V87 743 aa23.12■■□□□ 1.29
ATF1-202ENST00000549612 CPXCR1Q8N123 301 aa23.12■■□□□ 1.29
ATF1-202ENST00000549612 RAVER2Q9HCJ3 691 aaKnown RBP23.12■■□□□ 1.29
ATF1-202ENST00000549612 ZMYND8Q9ULU4 1186 aaPredicted RBP23.12■■□□□ 1.29
ATF1-202ENST00000549612 DNAJC25-GNG10A0A024R161 153 aa23.11■■□□□ 1.29
ATF1-202ENST00000549612 A0A1W2PPC1 479 aa23.11■■□□□ 1.29
ATF1-202ENST00000549612 PLA2G6O60733 806 aa23.11■■□□□ 1.29
ATF1-202ENST00000549612 MFAP1P55081 439 aaKnown RBP23.11■■□□□ 1.29
ATF1-202ENST00000549612 MSL3Q8N5Y2 521 aaKnown RBP23.11■■□□□ 1.29
ATF1-202ENST00000549612 ARRDC4Q8NCT1 418 aa23.11■■□□□ 1.29
ATF1-202ENST00000549612 CHURC1Q8WUH1 139 aa23.11■■□□□ 1.29
ATF1-202ENST00000549612 MCCP23508 829 aa23.1■■□□□ 1.29
ATF1-202ENST00000549612 CHST13Q8NET6 341 aa23.1■■□□□ 1.29
ATF1-202ENST00000549612 STAG1Q8WVM7 1258 aa23.1■■□□□ 1.29
ATF1-202ENST00000549612 GDF15Q99988 308 aa23.1■■□□□ 1.29
ATF1-202ENST00000549612 SENP6Q9GZR1 1112 aaPredicted RBP23.1■■□□□ 1.29
ATF1-202ENST00000549612 PCDH10Q9P2E7 1040 aa23.1■■□□□ 1.29
ATF1-202ENST00000549612 FBXO40Q9UH90 709 aa23.1■■□□□ 1.29
ATF1-202ENST00000549612 ANO1Q5XXA6 986 aa23.09■■□□□ 1.29
ATF1-202ENST00000549612 DDX11Q96FC9 970 aa23.09■■□□□ 1.29
ATF1-202ENST00000549612 TCP11L1Q9NUJ3 509 aa23.09■■□□□ 1.29
ATF1-202ENST00000549612 PLXNA1Q9UIW2 1896 aa23.09■■□□□ 1.29
ATF1-202ENST00000549612 PCP11498 1178 aaKnown RBP23.08■■□□□ 1.29
ATF1-202ENST00000549612 SYN1P17600 705 aa23.08■■□□□ 1.29
ATF1-202ENST00000549612 BMP8BP34820 402 aa23.08■■□□□ 1.29
ATF1-202ENST00000549612 GJC2Q5T442 439 aaPredicted RBP23.08■■□□□ 1.29
ATF1-202ENST00000549612 RCSD1Q6JBY9 416 aa23.08■■□□□ 1.29
ATF1-202ENST00000549612 ZNF467Q7Z7K2 595 aaPredicted RBP23.08■■□□□ 1.29
ATF1-202ENST00000549612 TOMM22Q9NS69 142 aa23.08■■□□□ 1.29
ATF1-202ENST00000549612 ISY1Q9ULR0 285 aaKnown RBP23.08■■□□□ 1.29
ATF1-202ENST00000549612 SYNGAP1Q96PV0 1343 aa23.08■■□□□ 1.28
ATF1-202ENST00000549612 KBTBD13C9JR72 458 aa23.07■■□□□ 1.28
ATF1-202ENST00000549612 ZNF865P0CJ78 1059 aaPredicted RBP23.07■■□□□ 1.28
ATF1-202ENST00000549612 TAL1P17542 331 aaPredicted RBP23.07■■□□□ 1.28
ATF1-202ENST00000549612 SLC4A3P48751 1232 aa23.07■■□□□ 1.28
ATF1-202ENST00000549612 HAND2P61296 217 aa23.07■■□□□ 1.28
ATF1-202ENST00000549612 IKQ13123 557 aaPredicted RBP23.07■■□□□ 1.28
ATF1-202ENST00000549612 RRP12Q5JTH9 1297 aaKnown RBP23.07■■□□□ 1.28
ATF1-202ENST00000549612 MAMDC4Q6UXC1 1216 aa23.07■■□□□ 1.28
ATF1-202ENST00000549612 KCTD1Q719H9 257 aa23.07■■□□□ 1.28
ATF1-202ENST00000549612 CNPY2Q9Y2B0 182 aa23.07■■□□□ 1.28
ATF1-202ENST00000549612 ZNF536O15090 1300 aa23.07■■□□□ 1.28
ATF1-202ENST00000549612 HIP1O00291 1037 aa23.06■■□□□ 1.28
ATF1-202ENST00000549612 LRRC41Q15345 812 aa23.06■■□□□ 1.28
ATF1-202ENST00000549612 AKNAD1Q5T1N1 836 aa23.06■■□□□ 1.28
ATF1-202ENST00000549612 RASGRP2Q7LDG7 609 aa23.06■■□□□ 1.28
ATF1-202ENST00000549612 TBC1D10CQ8IV04 446 aa23.06■■□□□ 1.28
ATF1-202ENST00000549612 ANKRD35Q8N283 1001 aa23.06■■□□□ 1.28
ATF1-202ENST00000549612 DCAF4Q8WV16 495 aa23.06■■□□□ 1.28
ATF1-202ENST00000549612 DIAPH3Q9NSV4 1193 aa23.06■■□□□ 1.28
ATF1-202ENST00000549612 RARBP10826 455 aa23.05■■□□□ 1.28
ATF1-202ENST00000549612 TOP1P11387 765 aaKnown RBP23.05■■□□□ 1.28
ATF1-202ENST00000549612 AKR1A1P14550 325 aa23.05■■□□□ 1.28
ATF1-202ENST00000549612 MAGEA10P43363 369 aaPredicted RBP23.05■■□□□ 1.28
ATF1-202ENST00000549612 CWC27Q6UX04 472 aaKnown RBP23.05■■□□□ 1.28
ATF1-202ENST00000549612 MFSD6Q6ZSS7 791 aa23.05■■□□□ 1.28
ATF1-202ENST00000549612 CHMP4CQ96CF2 233 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms