RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 PTCH2Q9Y6C5 1203 aa8.07□□□□□ -1.12
TMEM116-208ENST00000549537 MGAMO43451 1857 aa8.06□□□□□ -1.12
TMEM116-208ENST00000549537 NAV1Q8NEY1 1877 aa8.06□□□□□ -1.12
TMEM116-208ENST00000549537 GOLIM4O00461 696 aa8.06□□□□□ -1.12
TMEM116-208ENST00000549537 SH3BP2P78314 561 aa8.06□□□□□ -1.12
TMEM116-208ENST00000549537 TTF1Q15361 905 aaPredicted RBP8.06□□□□□ -1.12
TMEM116-208ENST00000549537 PTPRNQ16849 979 aa8.06□□□□□ -1.12
TMEM116-208ENST00000549537 TREML2Q5T2D2 321 aa8.06□□□□□ -1.12
TMEM116-208ENST00000549537 PTCRAQ6ISU1 281 aaPredicted RBP8.06□□□□□ -1.12
TMEM116-208ENST00000549537 CERS3Q8IU89 383 aa8.06□□□□□ -1.12
TMEM116-208ENST00000549537 FOXP4Q8IVH2 680 aaPredicted RBP8.06□□□□□ -1.12
TMEM116-208ENST00000549537 ZNF280CQ8ND82 737 aa8.06□□□□□ -1.12
TMEM116-208ENST00000549537 ZNF333Q96JL9 665 aa8.06□□□□□ -1.12
TMEM116-208ENST00000549537 HAUS7Q99871 368 aa8.06□□□□□ -1.12
TMEM116-208ENST00000549537 WDR18Q9BV38 432 aa8.06□□□□□ -1.12
TMEM116-208ENST00000549537 DCTPP1Q9H773 170 aa8.06□□□□□ -1.12
TMEM116-208ENST00000549537 SAP30BPQ9UHR5 308 aaKnown RBP8.06□□□□□ -1.12
TMEM116-208ENST00000549537 AGTPBP1Q9UPW5 1226 aa8.06□□□□□ -1.12
TMEM116-208ENST00000549537 MYH7P12883 1935 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 USP17L5A8MUK1 530 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 SMARCA5O60264 1052 aaPredicted RBP8.05□□□□□ -1.12
TMEM116-208ENST00000549537 GNRH1P01148 92 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 CHGBP05060 677 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 ASNSP08243 561 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 FDX1P10109 184 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 VARSP26640 1264 aaKnown RBP8.05□□□□□ -1.12
TMEM116-208ENST00000549537 GUCA2AQ02747 115 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 SPP2Q13103 211 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 ARHGEF6Q15052 776 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 TUSC1Q2TAM9 212 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 SLFNL1Q499Z3 407 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 SLC9C2Q5TAH2 1124 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 TATDN1Q6P1N9 297 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 GADL1Q6ZQY3 521 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 SYMPKQ92797 1274 aaKnown RBP8.05□□□□□ -1.12
TMEM116-208ENST00000549537 DNAJC2Q99543 621 aaKnown RBP8.05□□□□□ -1.12
TMEM116-208ENST00000549537 LRRCC1Q9C099 1032 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 EHD4Q9H223 541 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 GINM1Q9NU53 330 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 PAG1Q9NWQ8 432 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 ZBTB21Q9ULJ3 1066 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 PCDHB15Q9Y5E8 787 aa8.05□□□□□ -1.12
TMEM116-208ENST00000549537 ZNF532Q9HCE3 1301 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 MAGEB6P1A0A0J9YX57 407 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 GDF11O95390 407 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 HLA-DOAP06340 250 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 SHMT1P34896 483 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 ADD2P35612 726 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 PSMC4P43686 418 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 USP5P45974 858 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 PLCD1P51178 756 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 HMGCS2P54868 508 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 PRMT2P55345 433 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 RRP1P56182 461 aaKnown RBP8.04□□□□□ -1.12
TMEM116-208ENST00000549537 GABPAQ06546 454 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 IRF5Q13568 498 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 KIF22Q14807 665 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 SLC4A8Q2Y0W8 1093 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 LCORLQ8N3X6 602 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 CRACR2BQ8N4Y2 399 aaPredicted RBP8.04□□□□□ -1.12
TMEM116-208ENST00000549537 ZFP42Q96MM3 310 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 BOLA2Q9H3K6 86 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 EVA1BQ9NVM1 165 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 SRRDQ9UH36 339 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 SERPINB13Q9UIV8 391 aa8.04□□□□□ -1.12
TMEM116-208ENST00000549537 SPTLC1O15269 473 aa8.03□□□□□ -1.12
TMEM116-208ENST00000549537 GUCY1A2P33402 732 aa8.03□□□□□ -1.12
TMEM116-208ENST00000549537 BACE1P56817 501 aa8.03□□□□□ -1.12
TMEM116-208ENST00000549537 MTMR2Q13614 643 aa8.03□□□□□ -1.12
TMEM116-208ENST00000549537 UBE3CQ15386 1083 aa8.03□□□□□ -1.12
TMEM116-208ENST00000549537 SLC9C1Q4G0N8 1177 aa8.03□□□□□ -1.12
TMEM116-208ENST00000549537 HABP4Q5JVS0 413 aaKnown RBP8.03□□□□□ -1.12
TMEM116-208ENST00000549537 RETREG2Q8NC44 543 aa8.03□□□□□ -1.12
TMEM116-208ENST00000549537 UNC93B1Q9H1C4 597 aa8.03□□□□□ -1.12
TMEM116-208ENST00000549537 AS3MTQ9HBK9 375 aa8.03□□□□□ -1.12
TMEM116-208ENST00000549537 DCP1AQ9NPI6 582 aaPredicted RBP8.03□□□□□ -1.12
TMEM116-208ENST00000549537 LIMD1Q9UGP4 676 aa8.03□□□□□ -1.12
TMEM116-208ENST00000549537 MYPNQ86TC9 1320 aa8.03□□□□□ -1.12
TMEM116-208ENST00000549537 BAZ2AQ9UIF9 1905 aaKnown RBP8.02□□□□□ -1.13
TMEM116-208ENST00000549537 PLXNB2O15031 1838 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 USP17L10C9JJH3 530 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 MBD4O95243 580 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 GH2P01242 217 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 HOXA7P31268 230 aaPredicted RBP8.02□□□□□ -1.13
TMEM116-208ENST00000549537 FCGRTP55899 365 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 PRKCZQ05513 592 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 KCNH2Q12809 1159 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 FAM110CQ1W6H9 321 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 MRPL14Q6P1L8 145 aaKnown RBP8.02□□□□□ -1.13
TMEM116-208ENST00000549537 TTC6Q86TZ1 520 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 ANKRD13CQ8N6S4 541 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 SH3TC2Q8TF17 1288 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 SDR42E1Q8WUS8 393 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 CRNKL1Q9BZJ0 848 aaKnown RBP8.02□□□□□ -1.13
TMEM116-208ENST00000549537 BCL11AQ9H165 835 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 ASCC2Q9H1I8 757 aaPredicted RBP8.02□□□□□ -1.13
TMEM116-208ENST00000549537 ARMT1Q9H993 441 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 ECHDC1Q9NTX5 307 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 GABRQQ9UN88 632 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 UNC80Q8N2C7 3258 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms