RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CRACR2BQ8N4Y2 399 aaPredicted RBP12.56□□□□□ -0.4
LINC00661-204ENST00000549354 WASF1Q92558 559 aa12.56□□□□□ -0.4
LINC00661-204ENST00000549354 DRC1Q96MC2 740 aa12.56□□□□□ -0.4
LINC00661-204ENST00000549354 PCMTD1Q96MG8 357 aaPredicted RBP12.56□□□□□ -0.4
LINC00661-204ENST00000549354 CSRNP2Q9H175 543 aa12.56□□□□□ -0.4
LINC00661-204ENST00000549354 DDAH1O94760 285 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 PLEKHA8P1O95397 391 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 CALM1P0DP23 149 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 CALM2P0DP24 149 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 CALM3P0DP25 149 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 CYP2D6P10635 497 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 RHBDL3P58872 404 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 FUT2Q10981 343 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 EZH2Q15910 746 aaKnown RBP12.55□□□□□ -0.4
LINC00661-204ENST00000549354 MFSD14BQ5SR56 506 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 KRBA2Q6ZNG9 492 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 RASGRP2Q7LDG7 609 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 IQCA1Q86XH1 822 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 JMYQ8N9B5 988 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 SMARCE1Q969G3 411 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 TCP11L1Q9NUJ3 509 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 ZNF646O15015 1829 aaPredicted RBP12.55□□□□□ -0.4
LINC00661-204ENST00000549354 TADA3O75528 432 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 TROAPQ12815 778 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 CBFA2T2O43439 604 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 USP17L8P0C7I0 530 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
LINC00661-204ENST00000549354 GPKOWQ92917 476 aaPredicted RBP eCLIP12.55□□□□□ -0.4
LINC00661-204ENST00000549354 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINC00661-204ENST00000549354 PARD6BQ9BYG5 372 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 MRPL44Q9H9J2 332 aaKnown RBP12.55□□□□□ -0.4
LINC00661-204ENST00000549354 MCM9Q9NXL9 1143 aa12.55□□□□□ -0.4
LINC00661-204ENST00000549354 ENC1O14682 589 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 BTDP43251 543 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 LMAN1P49257 510 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 FKBP1AP62942 108 aaKnown RBP12.54□□□□□ -0.4
LINC00661-204ENST00000549354 PTPAQ15257 358 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 DPP8Q6V1X1 898 aaPredicted RBP12.54□□□□□ -0.4
LINC00661-204ENST00000549354 C7orf43Q8WVR3 580 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 CAPZA3Q96KX2 299 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 MAP3K14Q99558 947 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 RBM28Q9NW13 759 aaKnown RBP12.54□□□□□ -0.4
LINC00661-204ENST00000549354 STK32BQ9NY57 414 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 ZSCAN12O43309 604 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 USP5P45974 858 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 RNF26Q9BY78 433 aaPredicted RBP12.54□□□□□ -0.4
LINC00661-204ENST00000549354 ZC3H12CQ9C0D7 883 aaKnown RBP12.54□□□□□ -0.4
LINC00661-204ENST00000549354 POLD4Q9HCU8 107 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 MAN1B1Q9UKM7 699 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 SMC1AQ14683 1233 aaKnown RBP12.54□□□□□ -0.4
LINC00661-204ENST00000549354 CCDC178Q5BJE1 867 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 IFIT1BQ5T764 474 aaKnown RBP12.54□□□□□ -0.4
LINC00661-204ENST00000549354 RCSD1Q6JBY9 416 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 PIK3AP1Q6ZUJ8 805 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 C2CD5Q86YS7 1000 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 KRI1Q8N9T8 703 aaKnown RBP12.54□□□□□ -0.4
LINC00661-204ENST00000549354 ACRBPQ8NEB7 543 aa12.54□□□□□ -0.4
LINC00661-204ENST00000549354 PP2D1A8MPX8 630 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 IKBKBO14920 756 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 ADAMTS3O15072 1205 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 DEXIO95424 95 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 GOLGA8HP0CJ92 632 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 POSTNQ15063 836 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 KIF4BQ2VIQ3 1234 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 CATIPQ7Z7H3 387 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 DGKHQ86XP1 1220 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 DHX37Q8IY37 1157 aaKnown RBP12.53□□□□□ -0.4
LINC00661-204ENST00000549354 EYA3Q99504 573 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 MRIQ9BWK5 157 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 TAB2Q9NYJ8 693 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 H0YIN7 160 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 MATR3P43243 847 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC00661-204ENST00000549354 EN1Q05925 392 aaPredicted RBP12.53□□□□□ -0.4
LINC00661-204ENST00000549354 PDE4CQ08493 712 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 PTPROQ16827 1216 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 ZNF569Q5MCW4 686 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 MSL1Q68DK7 614 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 PLCD3Q8N3E9 789 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 TMEM51Q9NW97 253 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 TUBE1Q9UJT0 475 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 SLX4Q8IY92 1834 aa12.53□□□□□ -0.4
LINC00661-204ENST00000549354 ARHGAP6O43182 974 aa12.52□□□□□ -0.4
LINC00661-204ENST00000549354 PRPF3O43395 683 aaKnown RBP12.52□□□□□ -0.4
LINC00661-204ENST00000549354 TBC1D8O95759 1140 aa12.52□□□□□ -0.4
LINC00661-204ENST00000549354 GTF2IP78347 998 aa12.52□□□□□ -0.4
LINC00661-204ENST00000549354 RESP18Q5W5W9 173 aa12.52□□□□□ -0.4
LINC00661-204ENST00000549354 NOSTRINQ8IVI9 506 aa12.52□□□□□ -0.4
LINC00661-204ENST00000549354 CERS5Q8N5B7 392 aa12.52□□□□□ -0.4
LINC00661-204ENST00000549354 TC2NQ8N9U0 490 aa12.52□□□□□ -0.4
LINC00661-204ENST00000549354 TGFBRAP1Q8WUH2 860 aa12.52□□□□□ -0.4
LINC00661-204ENST00000549354 BPIFA3Q9BQP9 254 aa12.52□□□□□ -0.4
LINC00661-204ENST00000549354 ARFGAP3Q9NP61 516 aa12.52□□□□□ -0.4
LINC00661-204ENST00000549354 TOB1P50616 345 aaPredicted RBP12.52□□□□□ -0.41
LINC00661-204ENST00000549354 SPECC1LQ69YQ0 1117 aa12.52□□□□□ -0.41
LINC00661-204ENST00000549354 CC2D1AQ6P1N0 951 aaPredicted RBP12.52□□□□□ -0.41
LINC00661-204ENST00000549354 PODNQ7Z5L7 613 aa12.52□□□□□ -0.41
LINC00661-204ENST00000549354 TRIM10Q9UDY6 481 aa12.52□□□□□ -0.41
LINC00661-204ENST00000549354 CTNND2Q9UQB3 1225 aa12.52□□□□□ -0.41
LINC00661-204ENST00000549354 DAGLAQ9Y4D2 1042 aa12.52□□□□□ -0.41
LINC00661-204ENST00000549354 CYP2C19P33261 490 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms