RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 STX8Q9UNK0 236 aa13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 EPN1Q9Y6I3 576 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 ERLIN1O75477 346 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 SPAG1Q07617 926 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 BLIDQ8IZY5 108 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 NSUN4Q96CB9 384 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 LIMA1Q9UHB6 759 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 KCNQ2O43526 872 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 ZMYND10O75800 440 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 PFKFB3Q16875 520 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 DTHD1Q6ZMT9 781 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 TMEM60Q9H2L4 133 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 LUC7L2Q9Y383 392 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 USP17L3A6NCW0 530 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 USP17L4A6NCW7 530 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 ARHGAP25P42331 645 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 UBE4AQ14139 1066 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 BEND6Q5SZJ8 279 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 CCDC122Q5T0U0 273 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 TYW1BQ6NUM6 668 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 USP17L1Q7RTZ2 530 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 KIAA1328Q86T90 577 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 CCDC51Q96ER9 411 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 MYO6Q9UM54 1294 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 COL4A1P02462 1669 aa13.42□□□□□ -0.26
RAPGEF3-219ENST00000549151 ANKRD36CQ5JPF3 1778 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 B4DLN1 442 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 SEMA3EO15041 775 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 NDUFA10O95299 355 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 TNNT3P45378 269 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 USP5P45974 858 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 CCDC178Q5BJE1 867 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 HDXQ7Z353 690 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 SLC51AQ86UW1 340 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 DZIP1Q86YF9 867 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 TXLNBQ8N3L3 684 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 PNMA1Q8ND90 353 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 MKNK2Q9HBH9 465 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 RMND1Q9NWS8 449 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 MAGEC2Q9UBF1 373 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 ZNF652Q9Y2D9 606 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 TIAM2Q8IVF5 1701 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 MYH13Q9UKX3 1938 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 TRIM21P19474 475 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 KLK7P49862 253 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 SLC44A5Q8NCS7 719 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 VAT1LQ9HCJ6 419 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 FAN1Q9Y2M0 1017 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 ZNF804BA4D1E1 1349 aa13.41□□□□□ -0.26
RAPGEF3-219ENST00000549151 KIF5BP33176 963 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 TXNRD3Q86VQ6 643 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 HIBADHP31937 336 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 ZSCAN26Q16670 478 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 CT47A1Q5JQC4 288 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 IRF2BP1Q8IU81 584 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 OR8K1Q8NGG5 319 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 HPS3Q969F9 1004 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 DISC1Q9NRI5 854 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 DOCK2Q92608 1830 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 ITIH6Q6UXX5 1313 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 MACROD2A1Z1Q3 448 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 IRX5P78411 483 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 CYP27A1Q02318 531 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 HSP90B2PQ58FF3 399 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 CAGE1Q8TC20 777 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 DRC1Q96MC2 740 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 UBXN6Q9BZV1 441 aa13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 BSDC1Q9NW68 430 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 SAP30BPQ9UHR5 308 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 REXO2Q9Y3B8 237 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-219ENST00000549151 CICQ96RK0 1608 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 LETM2Q2VYF4 491 aa13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 RCSD1Q6JBY9 416 aa13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 CSGALNACT2Q8N6G5 542 aa13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 MB21D1Q8N884 522 aa13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 AGPAT5Q9NUQ2 364 aa13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 PSMA7O14818 248 aa13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 ATP1A1P05023 1023 aaKnown RBP13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 CAPN2P17655 700 aa13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 CALML3P27482 149 aa13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 FAM193AP78312 1265 aa13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 PIP4K2BP78356 416 aa13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 STIM1Q13586 685 aa13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 CASP8Q14790 479 aa13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
RAPGEF3-219ENST00000549151 NUTM2BA6NNL0 878 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 NUTM2EB1AL46 878 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 H7C1D1 291 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 EIF3JO75822 258 aaKnown RBP13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 LONP1P36776 959 aaKnown RBP13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 MTIF2P46199 727 aaKnown RBP13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 NAALADL2Q58DX5 795 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 GSPT2Q8IYD1 628 aaKnown RBP13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 ADSSL1Q8N142 457 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 PCDHA4Q9UN74 947 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 DUOX1Q9NRD9 1551 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 LRRC10BA6NIK2 292 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 POTEB2H3BUK9 544 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 MAP2K7O14733 419 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms