RNA–Protein interactions for RNA: ENST00000549047.5

ARFGAP1-221, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-221ENST00000549047 CNGA1P29973 690 aa17.99■□□□□ 0.47
ARFGAP1-221ENST00000549047 KCTD2Q14681 263 aa17.99■□□□□ 0.47
ARFGAP1-221ENST00000549047 SNRNP48Q6IEG0 339 aaKnown RBP17.99■□□□□ 0.47
ARFGAP1-221ENST00000549047 IL17RBQ9NRM6 502 aa17.99■□□□□ 0.47
ARFGAP1-221ENST00000549047 DDX20Q9UHI6 824 aaKnown RBP17.99■□□□□ 0.47
ARFGAP1-221ENST00000549047 ISY1Q9ULR0 285 aaKnown RBP17.99■□□□□ 0.47
ARFGAP1-221ENST00000549047 COLQQ9Y215 455 aaPredicted RBP17.99■□□□□ 0.47
ARFGAP1-221ENST00000549047 ATP2A1O14983 1001 aa17.98■□□□□ 0.47
ARFGAP1-221ENST00000549047 MSCO60682 206 aa17.98■□□□□ 0.47
ARFGAP1-221ENST00000549047 PGK2P07205 417 aa17.98■□□□□ 0.47
ARFGAP1-221ENST00000549047 MFAP1P55081 439 aaKnown RBP17.98■□□□□ 0.47
ARFGAP1-221ENST00000549047 GMCL1Q96IK5 515 aa17.98■□□□□ 0.47
ARFGAP1-221ENST00000549047 MAML3Q96JK9 1138 aa17.98■□□□□ 0.47
ARFGAP1-221ENST00000549047 SLC38A10Q9HBR0 1119 aa17.98■□□□□ 0.47
ARFGAP1-221ENST00000549047 TOMM22Q9NS69 142 aa17.98■□□□□ 0.47
ARFGAP1-221ENST00000549047 DIAPH3Q9NSV4 1193 aa17.98■□□□□ 0.47
ARFGAP1-221ENST00000549047 CTDP1Q9Y5B0 961 aaPredicted RBP17.98■□□□□ 0.47
ARFGAP1-221ENST00000549047 PARP14Q460N5 1801 aa17.98■□□□□ 0.47
ARFGAP1-221ENST00000549047 MCCP23508 829 aa17.97■□□□□ 0.47
ARFGAP1-221ENST00000549047 SLC1A4P43007 532 aa17.97■□□□□ 0.47
ARFGAP1-221ENST00000549047 HAND2P61296 217 aa17.97■□□□□ 0.47
ARFGAP1-221ENST00000549047 RRP12Q5JTH9 1297 aaKnown RBP17.97■□□□□ 0.47
ARFGAP1-221ENST00000549047 CWC27Q6UX04 472 aaKnown RBP17.97■□□□□ 0.47
ARFGAP1-221ENST00000549047 CHRDL2Q6WN34 429 aa17.97■□□□□ 0.47
ARFGAP1-221ENST00000549047 CPXCR1Q8N123 301 aa17.97■□□□□ 0.47
ARFGAP1-221ENST00000549047 CHMP4CQ96CF2 233 aa17.97■□□□□ 0.47
ARFGAP1-221ENST00000549047 RAVER2Q9HCJ3 691 aaKnown RBP17.97■□□□□ 0.47
ARFGAP1-221ENST00000549047 RIPK3Q9Y572 518 aa17.97■□□□□ 0.47
ARFGAP1-221ENST00000549047 PFASO15067 1338 aa17.97■□□□□ 0.47
ARFGAP1-221ENST00000549047 TMEM232C9JQI7 657 aa17.96■□□□□ 0.47
ARFGAP1-221ENST00000549047 COL6A1P12109 1028 aa17.96■□□□□ 0.47
ARFGAP1-221ENST00000549047 SLC4A3P48751 1232 aa17.96■□□□□ 0.47
ARFGAP1-221ENST00000549047 STAT2P52630 851 aa17.96■□□□□ 0.47
ARFGAP1-221ENST00000549047 HIP1O00291 1037 aa17.95■□□□□ 0.46
ARFGAP1-221ENST00000549047 PDE4AP27815 886 aa17.95■□□□□ 0.46
ARFGAP1-221ENST00000549047 NOVP48745 357 aa17.95■□□□□ 0.46
ARFGAP1-221ENST00000549047 IKQ13123 557 aaPredicted RBP17.95■□□□□ 0.46
ARFGAP1-221ENST00000549047 ZNF792Q3KQV3 632 aa17.95■□□□□ 0.46
ARFGAP1-221ENST00000549047 PRAMEF19Q5SWL8 479 aa17.95■□□□□ 0.46
ARFGAP1-221ENST00000549047 TBC1D10CQ8IV04 446 aa17.95■□□□□ 0.46
ARFGAP1-221ENST00000549047 C7orf61Q8IZ16 206 aa17.95■□□□□ 0.46
ARFGAP1-221ENST00000549047 CHURC1Q8WUH1 139 aa17.95■□□□□ 0.46
ARFGAP1-221ENST00000549047 STAG1Q8WVM7 1258 aa17.95■□□□□ 0.46
ARFGAP1-221ENST00000549047 DIS3Q9Y2L1 958 aaKnown RBP17.95■□□□□ 0.46
ARFGAP1-221ENST00000549047 SEPT4O43236 478 aa17.94■□□□□ 0.46
ARFGAP1-221ENST00000549047 OAZ1P54368 228 aa17.94■□□□□ 0.46
ARFGAP1-221ENST00000549047 AKNAD1Q5T1N1 836 aa17.94■□□□□ 0.46
ARFGAP1-221ENST00000549047 KCTD1Q719H9 257 aa17.94■□□□□ 0.46
ARFGAP1-221ENST00000549047 RASGRP2Q7LDG7 609 aa17.94■□□□□ 0.46
ARFGAP1-221ENST00000549047 FAM160B2Q86V87 743 aa17.94■□□□□ 0.46
ARFGAP1-221ENST00000549047 TINF2Q9BSI4 451 aa17.94■□□□□ 0.46
ARFGAP1-221ENST00000549047 MTMR7Q9Y216 660 aa17.94■□□□□ 0.46
ARFGAP1-221ENST00000549047 TRIOBPQ9H2D6 2365 aa17.94■□□□□ 0.46
ARFGAP1-221ENST00000549047 COL11A1P12107 1806 aaPredicted RBP17.93■□□□□ 0.46
ARFGAP1-221ENST00000549047 FDX1P10109 184 aa17.93■□□□□ 0.46
ARFGAP1-221ENST00000549047 PCP11498 1178 aaKnown RBP17.93■□□□□ 0.46
ARFGAP1-221ENST00000549047 ANO1Q5XXA6 986 aa17.93■□□□□ 0.46
ARFGAP1-221ENST00000549047 RCSD1Q6JBY9 416 aa17.93■□□□□ 0.46
ARFGAP1-221ENST00000549047 MFSD6Q6ZSS7 791 aa17.93■□□□□ 0.46
ARFGAP1-221ENST00000549047 DDX11Q96FC9 970 aa17.93■□□□□ 0.46
ARFGAP1-221ENST00000549047 RNF41Q9H4P4 317 aaPredicted RBP17.93■□□□□ 0.46
ARFGAP1-221ENST00000549047 TCP11L1Q9NUJ3 509 aa17.93■□□□□ 0.46
ARFGAP1-221ENST00000549047 NRBP1Q9UHY1 535 aa17.93■□□□□ 0.46
ARFGAP1-221ENST00000549047 MYH4Q9Y623 1939 aa17.93■□□□□ 0.46
ARFGAP1-221ENST00000549047 DNM1LO00429 736 aa17.92■□□□□ 0.46
ARFGAP1-221ENST00000549047 PLA2G6O60733 806 aa17.92■□□□□ 0.46
ARFGAP1-221ENST00000549047 TOP1P11387 765 aaKnown RBP17.92■□□□□ 0.46
ARFGAP1-221ENST00000549047 GSPT1P15170 499 aaKnown RBP17.92■□□□□ 0.46
ARFGAP1-221ENST00000549047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.92■□□□□ 0.462e-6■■□□□ 14.4
ARFGAP1-221ENST00000549047 CHST13Q8NET6 341 aa17.92■□□□□ 0.46
ARFGAP1-221ENST00000549047 DCAF4Q8WV16 495 aa17.92■□□□□ 0.46
ARFGAP1-221ENST00000549047 TMEM47Q9BQJ4 181 aa17.92■□□□□ 0.46
ARFGAP1-221ENST00000549047 HOMER2Q9NSB8 354 aa17.92■□□□□ 0.46
ARFGAP1-221ENST00000549047 RBM27Q9P2N5 1060 aaKnown RBP17.92■□□□□ 0.46
ARFGAP1-221ENST00000549047 FBXO40Q9UH90 709 aa17.92■□□□□ 0.46
ARFGAP1-221ENST00000549047 DNAJC25-GNG10A0A024R161 153 aa17.91■□□□□ 0.46
ARFGAP1-221ENST00000549047 ZNF213O14771 459 aa17.91■□□□□ 0.46
ARFGAP1-221ENST00000549047 CCDC96Q2M329 555 aa17.91■□□□□ 0.46
ARFGAP1-221ENST00000549047 TTC22Q5TAA0 569 aa17.91■□□□□ 0.46
ARFGAP1-221ENST00000549047 ANKRD35Q8N283 1001 aa17.91■□□□□ 0.46
ARFGAP1-221ENST00000549047 ARRDC4Q8NCT1 418 aa17.91■□□□□ 0.46
ARFGAP1-221ENST00000549047 PRO3102Q9H379 93 aa17.91■□□□□ 0.46
ARFGAP1-221ENST00000549047 ZMYND8Q9ULU4 1186 aaPredicted RBP17.91■□□□□ 0.46
ARFGAP1-221ENST00000549047 ZNF536O15090 1300 aa17.91■□□□□ 0.46
ARFGAP1-221ENST00000549047 NEDD4P46934 1319 aa17.91■□□□□ 0.46
ARFGAP1-221ENST00000549047 TAL1P17542 331 aaPredicted RBP17.9■□□□□ 0.46
ARFGAP1-221ENST00000549047 LRRC26Q2I0M4 334 aa17.9■□□□□ 0.46
ARFGAP1-221ENST00000549047 GJC2Q5T442 439 aaPredicted RBP17.9■□□□□ 0.46
ARFGAP1-221ENST00000549047 MSL3Q8N5Y2 521 aaKnown RBP17.9■□□□□ 0.46
ARFGAP1-221ENST00000549047 ESR2Q92731 530 aa17.9■□□□□ 0.46
ARFGAP1-221ENST00000549047 AGBL1Q96MI9 1066 aa17.9■□□□□ 0.46
ARFGAP1-221ENST00000549047 DSCC1Q9BVC3 393 aa17.9■□□□□ 0.46
ARFGAP1-221ENST00000549047 SENP6Q9GZR1 1112 aaPredicted RBP17.9■□□□□ 0.46
ARFGAP1-221ENST00000549047 PRR12Q9ULL5 1215 aa17.9■□□□□ 0.46
ARFGAP1-221ENST00000549047 CNPY2Q9Y2B0 182 aa17.9■□□□□ 0.46
ARFGAP1-221ENST00000549047 DNAH12Q6ZR08 3092 aa17.9■□□□□ 0.46
ARFGAP1-221ENST00000549047 MYCNP04198 464 aaPredicted RBP17.89■□□□□ 0.45
ARFGAP1-221ENST00000549047 FXR1P51114 621 aaKnown RBP eCLIP17.89■□□□□ 0.45
ARFGAP1-221ENST00000549047 SNAP25P60880 206 aa17.89■□□□□ 0.45
ARFGAP1-221ENST00000549047 CCDC174Q6PII3 467 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms