RNA–Protein interactions for RNA: ENST00000548980.1

NCKAP1L-206, Transcript of NCK associated protein 1 like, humanhuman

TSL 2

Gene NCKAP1L, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-206ENST00000548980 TLL1O43897 1013 aa11.78□□□□□ -0.52
NCKAP1L-206ENST00000548980 DUSP11O75319 330 aaKnown RBP11.78□□□□□ -0.52
NCKAP1L-206ENST00000548980 SNAI1O95863 264 aaPredicted RBP11.78□□□□□ -0.52
NCKAP1L-206ENST00000548980 TMEM179Q6ZVK1 233 aa11.78□□□□□ -0.52
NCKAP1L-206ENST00000548980 MSL3Q8N5Y2 521 aaKnown RBP11.78□□□□□ -0.52
NCKAP1L-206ENST00000548980 MAGEB6Q8N7X4 407 aa11.78□□□□□ -0.52
NCKAP1L-206ENST00000548980 VTI1AQ96AJ9 217 aa11.78□□□□□ -0.52
NCKAP1L-206ENST00000548980 GPR108Q9NPR9 543 aa11.78□□□□□ -0.52
NCKAP1L-206ENST00000548980 ADAMTS5Q9UNA0 930 aa11.78□□□□□ -0.52
NCKAP1L-206ENST00000548980 COG5Q9UP83 839 aa11.78□□□□□ -0.52
NCKAP1L-206ENST00000548980 PCDHA11Q9Y5I1 949 aa11.78□□□□□ -0.52
NCKAP1L-206ENST00000548980 MTCH2Q9Y6C9 303 aa11.78□□□□□ -0.52
NCKAP1L-206ENST00000548980 UMODL1Q5DID0 1318 aa11.78□□□□□ -0.52
NCKAP1L-206ENST00000548980 GTPBP6O43824 516 aaPredicted RBP11.77□□□□□ -0.53
NCKAP1L-206ENST00000548980 CD4P01730 458 aa11.77□□□□□ -0.53
NCKAP1L-206ENST00000548980 POLR3DP05423 398 aaPredicted RBP11.77□□□□□ -0.53
NCKAP1L-206ENST00000548980 POU3F3P20264 500 aaPredicted RBP11.77□□□□□ -0.53
NCKAP1L-206ENST00000548980 ICA1Q05084 483 aa11.77□□□□□ -0.53
NCKAP1L-206ENST00000548980 FAM9BQ8IZU0 186 aa11.77□□□□□ -0.53
NCKAP1L-206ENST00000548980 UPF3AQ9H1J1 476 aaKnown RBP11.77□□□□□ -0.53
NCKAP1L-206ENST00000548980 HIPK3Q9H422 1215 aa11.77□□□□□ -0.53
NCKAP1L-206ENST00000548980 SH2D4AQ9H788 454 aa11.77□□□□□ -0.53
NCKAP1L-206ENST00000548980 VCPKMTQ9H867 229 aa11.77□□□□□ -0.53
NCKAP1L-206ENST00000548980 ZNF214Q9UL59 606 aaPredicted RBP11.77□□□□□ -0.53
NCKAP1L-206ENST00000548980 TMX2Q9Y320 296 aa11.77□□□□□ -0.53
NCKAP1L-206ENST00000548980 MYH8P13535 1937 aa11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 RFXAPO00287 272 aa11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 VWA5AO00534 786 aa11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 COPB2P35606 906 aa11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 STAT3P40763 770 aa11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 GJA9P57773 515 aa11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 MAMDC4Q6UXC1 1216 aa11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 SIAH1Q8IUQ4 282 aa11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 SNX27Q96L92 541 aa11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 RIOK1Q9BRS2 568 aaKnown RBP11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 SPC25Q9HBM1 224 aa11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 ARHGEF10LQ9HCE6 1279 aa11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 FBXO28Q9NVF7 368 aa11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 SLC4A7Q9Y6M7 1214 aa11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 BRWD1Q9NSI6 2320 aa11.76□□□□□ -0.53
NCKAP1L-206ENST00000548980 EPOPA6NHQ4 379 aa11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 ZBBXA8MT70 800 aa11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 CA3P07451 260 aa11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 ATP2A2P16615 1042 aaKnown RBP11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 CCL23P55773 120 aa11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 SLFN5Q08AF3 891 aa11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 GNASQ5JWF2 1037 aa11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 KRT40Q6A162 431 aa11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 REPS2Q8NFH8 660 aa11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 WNT8AQ9H1J5 351 aa11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 MCM9Q9NXL9 1143 aa11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 TLR7Q9NYK1 1049 aaKnown RBP11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 DBNLQ9UJU6 430 aaKnown RBP11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 PPP1R9AQ9ULJ8 1098 aa11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 MCM3APO60318 1980 aa11.75□□□□□ -0.53
NCKAP1L-206ENST00000548980 PI4K2BG5E9Z4 385 aa11.74□□□□□ -0.53
NCKAP1L-206ENST00000548980 CTAGE5O15320 804 aa11.74□□□□□ -0.53
NCKAP1L-206ENST00000548980 GNAI2P04899 355 aa11.74□□□□□ -0.53
NCKAP1L-206ENST00000548980 AKR1B1P15121 316 aa11.74□□□□□ -0.53
NCKAP1L-206ENST00000548980 MRE11P49959 708 aa11.74□□□□□ -0.53
NCKAP1L-206ENST00000548980 ACVR2BQ13705 512 aa11.74□□□□□ -0.53
NCKAP1L-206ENST00000548980 CCDC144BQ3MJ40 725 aa11.74□□□□□ -0.53
NCKAP1L-206ENST00000548980 HLA-CQ95604 372 aa11.74□□□□□ -0.53
NCKAP1L-206ENST00000548980 NOC4LQ9BVI4 516 aaKnown RBP11.74□□□□□ -0.53
NCKAP1L-206ENST00000548980 ANTXR1Q9H6X2 564 aa11.74□□□□□ -0.53
NCKAP1L-206ENST00000548980 CERS4Q9HA82 394 aa11.74□□□□□ -0.53
NCKAP1L-206ENST00000548980 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.74□□□□□ -0.53
NCKAP1L-206ENST00000548980 DNAJC25-GNG10A0A024R161 153 aa11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 PRR33A8MZF0 331 aa11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 SMIM22K7EJ46 135 aa11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 CYP2D6P10635 497 aa11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 COL4A4P53420 1690 aaPredicted RBP11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 BEX3Q00994 111 aa11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 OS9Q13438 667 aaPredicted RBP11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 TMEM67Q5HYA8 995 aa11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 TMED8Q6PL24 325 aaPredicted RBP11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 ZNF467Q7Z7K2 595 aaPredicted RBP11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 RPUSD2Q8IZ73 545 aaKnown RBP11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 SLC43A3Q8NBI5 491 aa11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 VWCEQ96DN2 955 aa11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 DDX11Q96FC9 970 aa11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 DYNLL2Q96FJ2 89 aa11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 TEX13BQ9BXU2 312 aa11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 CRNKL1Q9BZJ0 848 aaKnown RBP11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 CD320Q9NPF0 282 aa11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 SWAP70Q9UH65 585 aa11.73□□□□□ -0.53
NCKAP1L-206ENST00000548980 MAGEB6P1A0A0J9YX57 407 aa11.72□□□□□ -0.53
NCKAP1L-206ENST00000548980 NKX3-2P78367 333 aa11.72□□□□□ -0.53
NCKAP1L-206ENST00000548980 TTLL4Q14679 1199 aa11.72□□□□□ -0.53
NCKAP1L-206ENST00000548980 FAM83BQ5T0W9 1011 aa11.72□□□□□ -0.53
NCKAP1L-206ENST00000548980 SNRNP48Q6IEG0 339 aaKnown RBP11.72□□□□□ -0.53
NCKAP1L-206ENST00000548980 CXCL17Q6UXB2 119 aa11.72□□□□□ -0.53
NCKAP1L-206ENST00000548980 ARMCX2Q7L311 632 aa11.72□□□□□ -0.53
NCKAP1L-206ENST00000548980 SDR42E1Q8WUS8 393 aa11.72□□□□□ -0.53
NCKAP1L-206ENST00000548980 SCLYQ96I15 445 aa11.72□□□□□ -0.53
NCKAP1L-206ENST00000548980 FGD4Q96M96 766 aa11.72□□□□□ -0.53
NCKAP1L-206ENST00000548980 ABHD16BQ9H3Z7 469 aa11.72□□□□□ -0.53
NCKAP1L-206ENST00000548980 DCP1AQ9NPI6 582 aaPredicted RBP11.72□□□□□ -0.53
NCKAP1L-206ENST00000548980 RIPK3Q9Y572 518 aa11.72□□□□□ -0.53
NCKAP1L-206ENST00000548980 WDFY4Q6ZS81 3184 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms