RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 GAS2L1Q99501 681 aaPredicted RBP16.34■□□□□ 0.21
CDX2-202ENST00000548877 KANSL2Q9H9L4 492 aa16.34■□□□□ 0.21
CDX2-202ENST00000548877 CHD7Q9P2D1 2997 aa16.34■□□□□ 0.21
CDX2-202ENST00000548877 GREB1LQ9C091 1923 aaPredicted RBP16.33■□□□□ 0.21
CDX2-202ENST00000548877 EEF2P13639 858 aaKnown RBP16.33■□□□□ 0.2
CDX2-202ENST00000548877 CDK8P49336 464 aa16.33■□□□□ 0.2
CDX2-202ENST00000548877 CEP85Q6P2H3 762 aa16.33■□□□□ 0.2
CDX2-202ENST00000548877 C16orf86Q6ZW13 317 aa16.33■□□□□ 0.2
CDX2-202ENST00000548877 LENG1Q96BZ8 264 aaPredicted RBP16.33■□□□□ 0.2
CDX2-202ENST00000548877 GLT1D1Q96MS3 346 aa16.33■□□□□ 0.2
CDX2-202ENST00000548877 UPF3AQ9H1J1 476 aaKnown RBP16.33■□□□□ 0.2
CDX2-202ENST00000548877 THEGQ9P2T0 379 aa16.33■□□□□ 0.2
CDX2-202ENST00000548877 PBX2P40425 430 aa16.32■□□□□ 0.2
CDX2-202ENST00000548877 PSRC1Q6PGN9 363 aaPredicted RBP16.32■□□□□ 0.2
CDX2-202ENST00000548877 PCSK9Q8NBP7 692 aaKnown RBP16.32■□□□□ 0.2
CDX2-202ENST00000548877 GOPCQ9HD26 462 aa16.32■□□□□ 0.2
CDX2-202ENST00000548877 BDP1A6H8Y1 2624 aa16.32■□□□□ 0.2
CDX2-202ENST00000548877 MYADML2A6NDP7 307 aa16.31■□□□□ 0.2
CDX2-202ENST00000548877 ARVCFO00192 962 aa16.31■□□□□ 0.2
CDX2-202ENST00000548877 ATP2A1O14983 1001 aa16.31■□□□□ 0.2
CDX2-202ENST00000548877 GJA9P57773 515 aa16.31■□□□□ 0.2
CDX2-202ENST00000548877 MRPS5P82675 430 aaKnown RBP16.31■□□□□ 0.2
CDX2-202ENST00000548877 ADGRE1Q14246 886 aa16.31■□□□□ 0.2
CDX2-202ENST00000548877 HSP90AB4PQ58FF6 505 aa16.31■□□□□ 0.2
CDX2-202ENST00000548877 FAM126BQ8IXS8 530 aa16.31■□□□□ 0.2
CDX2-202ENST00000548877 TMEM199Q8N511 208 aa16.31■□□□□ 0.2
CDX2-202ENST00000548877 TEX13BQ9BXU2 312 aa16.31■□□□□ 0.2
CDX2-202ENST00000548877 PRDM12Q9H4Q4 367 aa16.31■□□□□ 0.2
CDX2-202ENST00000548877 ARMT1Q9H993 441 aa16.31■□□□□ 0.2
CDX2-202ENST00000548877 EXOC6BQ9Y2D4 811 aa16.31■□□□□ 0.2
CDX2-202ENST00000548877 MCM3APO60318 1980 aa16.31■□□□□ 0.2
CDX2-202ENST00000548877 ZBED9Q6R2W3 1325 aa16.3■□□□□ 0.2
CDX2-202ENST00000548877 GRXCR1A8MXD5 290 aa16.3■□□□□ 0.2
CDX2-202ENST00000548877 PRKAB2O43741 272 aa16.3■□□□□ 0.2
CDX2-202ENST00000548877 CD4P01730 458 aa16.3■□□□□ 0.2
CDX2-202ENST00000548877 ASGR1P07306 291 aa16.3■□□□□ 0.2
CDX2-202ENST00000548877 CSF2RAP15509 400 aa16.3■□□□□ 0.2
CDX2-202ENST00000548877 ADD2P35612 726 aa16.3■□□□□ 0.2
CDX2-202ENST00000548877 RAB30Q15771 203 aa16.3■□□□□ 0.2
CDX2-202ENST00000548877 ZNF365Q70YC5 407 aa16.3■□□□□ 0.2
CDX2-202ENST00000548877 RHPN1Q8TCX5 695 aa16.3■□□□□ 0.2
CDX2-202ENST00000548877 ADAMTS19Q8TE59 1207 aa16.3■□□□□ 0.2
CDX2-202ENST00000548877 HERVK_113Q902F9 699 aa16.3■□□□□ 0.2
CDX2-202ENST00000548877 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.3■□□□□ 0.2
CDX2-202ENST00000548877 GBF1Q92538 1859 aa16.29■□□□□ 0.2
CDX2-202ENST00000548877 REV3LO60673 3130 aa16.29■□□□□ 0.2
CDX2-202ENST00000548877 A0A0U1RQG5 324 aaPredicted RBP16.29■□□□□ 0.2
CDX2-202ENST00000548877 USP17L12C9JPN9 530 aa16.29■□□□□ 0.2
CDX2-202ENST00000548877 USP17L21D6R901 530 aa16.29■□□□□ 0.2
CDX2-202ENST00000548877 SMIM22K7EJ46 135 aa16.29■□□□□ 0.2
CDX2-202ENST00000548877 GOLIM4O00461 696 aa16.29■□□□□ 0.2
CDX2-202ENST00000548877 RLBP1P12271 317 aa16.29■□□□□ 0.2
CDX2-202ENST00000548877 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
CDX2-202ENST00000548877 FAM83BQ5T0W9 1011 aa16.29■□□□□ 0.2
CDX2-202ENST00000548877 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
CDX2-202ENST00000548877 SLC43A3Q8NBI5 491 aa16.29■□□□□ 0.2
CDX2-202ENST00000548877 ABHD16BQ9H3Z7 469 aa16.29■□□□□ 0.2
CDX2-202ENST00000548877 IL23AQ9NPF7 189 aa16.29■□□□□ 0.2
CDX2-202ENST00000548877 RIPK3Q9Y572 518 aa16.29■□□□□ 0.2
CDX2-202ENST00000548877 MYH7P12883 1935 aa16.28■□□□□ 0.2
CDX2-202ENST00000548877 CTAGE5O15320 804 aa16.28■□□□□ 0.2
CDX2-202ENST00000548877 ADCY6O43306 1168 aa16.28■□□□□ 0.2
CDX2-202ENST00000548877 MBD4O95243 580 aa16.28■□□□□ 0.2
CDX2-202ENST00000548877 PLA2G5P39877 138 aa16.28■□□□□ 0.2
CDX2-202ENST00000548877 CCDC129Q6ZRS4 1044 aa16.28■□□□□ 0.2
CDX2-202ENST00000548877 AMOTL1Q8IY63 956 aa16.28■□□□□ 0.2
CDX2-202ENST00000548877 DDX11Q96FC9 970 aa16.28■□□□□ 0.2
CDX2-202ENST00000548877 FGD4Q96M96 766 aa16.28■□□□□ 0.2
CDX2-202ENST00000548877 SLF1Q9BQI6 1058 aa16.28■□□□□ 0.2
CDX2-202ENST00000548877 SPC25Q9HBM1 224 aa16.28■□□□□ 0.2
CDX2-202ENST00000548877 IL1RAPL2Q9NP60 686 aa16.28■□□□□ 0.2
CDX2-202ENST00000548877 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.28■□□□□ 0.2
CDX2-202ENST00000548877 MSRAQ9UJ68 235 aa16.28■□□□□ 0.2
CDX2-202ENST00000548877 CYP2D7A0A087X1C5 515 aa16.27■□□□□ 0.2
CDX2-202ENST00000548877 TLR3O15455 904 aaKnown RBP16.27■□□□□ 0.2
CDX2-202ENST00000548877 C6orf222P0C671 652 aaPredicted RBP16.27■□□□□ 0.2
CDX2-202ENST00000548877 IRX5P78411 483 aaPredicted RBP16.27■□□□□ 0.2
CDX2-202ENST00000548877 CCDC144BQ3MJ40 725 aa16.27■□□□□ 0.2
CDX2-202ENST00000548877 SNRNP48Q6IEG0 339 aaKnown RBP16.27■□□□□ 0.2
CDX2-202ENST00000548877 ITPRIPQ8IWB1 547 aa16.27■□□□□ 0.2
CDX2-202ENST00000548877 FTSJ3Q8IY81 847 aaKnown RBP16.27■□□□□ 0.2
CDX2-202ENST00000548877 CLASRPQ8N2M8 674 aaKnown RBP16.27■□□□□ 0.2
CDX2-202ENST00000548877 PRPF38AQ8NAV1 312 aaKnown RBP16.27■□□□□ 0.2
CDX2-202ENST00000548877 UHRF1Q96T88 793 aaPredicted RBP16.27■□□□□ 0.2
CDX2-202ENST00000548877 SEZ6LQ9BYH1 1024 aa16.27■□□□□ 0.2
CDX2-202ENST00000548877 KATNBL1Q9H079 304 aa16.27■□□□□ 0.2
CDX2-202ENST00000548877 NYAP2Q9P242 653 aa16.27■□□□□ 0.2
CDX2-202ENST00000548877 ZHX1Q9UKY1 873 aaPredicted RBP16.27■□□□□ 0.2
CDX2-202ENST00000548877 TRANK1O15050 2925 aa16.26■□□□□ 0.19
CDX2-202ENST00000548877 ACRP10323 421 aa16.26■□□□□ 0.19
CDX2-202ENST00000548877 UBE3CQ15386 1083 aa16.26■□□□□ 0.19
CDX2-202ENST00000548877 GNASQ5JWF2 1037 aa16.26■□□□□ 0.19
CDX2-202ENST00000548877 CTR9Q6PD62 1173 aa16.26■□□□□ 0.19
CDX2-202ENST00000548877 PPM1EQ8WY54 764 aa16.26■□□□□ 0.19
CDX2-202ENST00000548877 KIF1BPQ96EK5 621 aa16.26■□□□□ 0.19
CDX2-202ENST00000548877 DNAJC2Q99543 621 aaKnown RBP16.26■□□□□ 0.19
CDX2-202ENST00000548877 MTIF3Q9H2K0 278 aaKnown RBP16.26■□□□□ 0.19
CDX2-202ENST00000548877 PAG1Q9NWQ8 432 aa16.26■□□□□ 0.19
CDX2-202ENST00000548877 CXXC1Q9P0U4 656 aaPredicted RBP16.26■□□□□ 0.19
CDX2-202ENST00000548877 RAPGEFL1Q9UHV5 662 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms