RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 TBC1D10BQ4KMP7 808 aaPredicted RBP15.88■□□□□ 0.13
CACNB3-209ENST00000548860 MAEAQ7L5Y9 396 aa15.88■□□□□ 0.13
CACNB3-209ENST00000548860 FERMT2Q96AC1 680 aa15.88■□□□□ 0.13
CACNB3-209ENST00000548860 FAM84BQ96KN1 310 aaPredicted RBP15.88■□□□□ 0.13
CACNB3-209ENST00000548860 USP8P40818 1118 aa15.88■□□□□ 0.13
CACNB3-209ENST00000548860 SLC7A5Q01650 507 aa15.88■□□□□ 0.13
CACNB3-209ENST00000548860 SPAG1Q07617 926 aa15.88■□□□□ 0.13
CACNB3-209ENST00000548860 LLGL1Q15334 1064 aa15.88■□□□□ 0.13
CACNB3-209ENST00000548860 TBC1D9BQ66K14 1250 aa15.88■□□□□ 0.13
CACNB3-209ENST00000548860 SH3RF3Q8TEJ3 882 aaPredicted RBP15.88■□□□□ 0.13
CACNB3-209ENST00000548860 STAG1Q8WVM7 1258 aa15.88■□□□□ 0.13
CACNB3-209ENST00000548860 FBXO3Q9UK99 471 aa15.88■□□□□ 0.13
CACNB3-209ENST00000548860 PRDM4Q9UKN5 801 aa15.88■□□□□ 0.13
CACNB3-209ENST00000548860 CYLC1P35663 651 aaPredicted RBP15.87■□□□□ 0.13
CACNB3-209ENST00000548860 HNRNPH2P55795 449 aaKnown RBP15.87■□□□□ 0.13
CACNB3-209ENST00000548860 GTF2IP78347 998 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 SGMS1Q86VZ5 419 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 REXO1L1PQ8IX06 675 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 ABCB6Q9NP58 842 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 CWC15Q9P013 229 aaKnown RBP15.87■□□□□ 0.13
CACNB3-209ENST00000548860 TUBE1Q9UJT0 475 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 FAN1Q9Y2M0 1017 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 TACC3Q9Y6A5 838 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 SLIT1O75093 1534 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 USO1O60763 962 aaKnown RBP15.87■□□□□ 0.13
CACNB3-209ENST00000548860 ZYXQ15942 572 aaKnown RBP15.87■□□□□ 0.13
CACNB3-209ENST00000548860 DOK7Q18PE1 504 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 TMEM266Q2M3C6 531 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 ODF2Q5BJF6 829 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.87■□□□□ 0.13
CACNB3-209ENST00000548860 EYA3Q99504 573 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 FER1L4A9Z1Z3 1794 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 KRT86O43790 486 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 CACNB3P54284 484 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 USH1GQ495M9 461 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 RRP36Q96EU6 259 aaKnown RBP15.87■□□□□ 0.13
CACNB3-209ENST00000548860 TMEM260Q9NX78 707 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 SMARCAL1Q9NZC9 954 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 LRWD1Q9UFC0 647 aa15.87■□□□□ 0.13
CACNB3-209ENST00000548860 BMP15O95972 392 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 FCHSD1Q86WN1 690 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 OR8K1Q8NGG5 319 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 SNX29Q8TEQ0 813 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 DCP1AQ9NPI6 582 aaPredicted RBP15.86■□□□□ 0.13
CACNB3-209ENST00000548860 RAPGEF1Q13905 1077 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 DCAF17Q5H9S7 520 aaPredicted RBP15.86■□□□□ 0.13
CACNB3-209ENST00000548860 RIN2Q8WYP3 895 aaPredicted RBP15.86■□□□□ 0.13
CACNB3-209ENST00000548860 C6orf50Q9HD87 102 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 INTS13Q9NVM9 706 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 PARP3Q9Y6F1 533 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 CHMP2AO43633 222 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 PAFAH1B1P43034 410 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 TRIM28Q13263 835 aaKnown RBP15.86■□□□□ 0.13
CACNB3-209ENST00000548860 MFSD14BQ5SR56 506 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 ZFYVE27Q5T4F4 411 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 TMTC1Q8IUR5 882 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 GPR161Q8N6U8 529 aaKnown RBP15.86■□□□□ 0.13
CACNB3-209ENST00000548860 PIGSQ96S52 555 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 PPP1R1BQ9UD71 204 aaPredicted RBP15.86■□□□□ 0.13
CACNB3-209ENST00000548860 ADGRG1Q9Y653 693 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 ZNF804BA4D1E1 1349 aa15.86■□□□□ 0.13
CACNB3-209ENST00000548860 TNS3Q68CZ2 1445 aa15.85■□□□□ 0.13
CACNB3-209ENST00000548860 FCER1AP12319 257 aa15.85■□□□□ 0.13
CACNB3-209ENST00000548860 UBE2SQ16763 222 aa15.85■□□□□ 0.13
CACNB3-209ENST00000548860 TUBGCP2Q9BSJ2 902 aa15.85■□□□□ 0.13
CACNB3-209ENST00000548860 ZNF446Q9NWS9 450 aa15.85■□□□□ 0.13
CACNB3-209ENST00000548860 MYO6Q9UM54 1294 aa15.85■□□□□ 0.13
CACNB3-209ENST00000548860 N4BP1O75113 896 aaKnown RBP15.85■□□□□ 0.13
CACNB3-209ENST00000548860 SLURP2P0DP57 97 aa15.85■□□□□ 0.13
CACNB3-209ENST00000548860 CCDC43Q96MW1 224 aaKnown RBP15.85■□□□□ 0.13
CACNB3-209ENST00000548860 TTC26A0AVF1 554 aa15.85■□□□□ 0.13
CACNB3-209ENST00000548860 ZNF185O15231 689 aa15.85■□□□□ 0.13
CACNB3-209ENST00000548860 TADA3O75528 432 aa15.85■□□□□ 0.13
CACNB3-209ENST00000548860 PLCG1P19174 1290 aa15.85■□□□□ 0.13
CACNB3-209ENST00000548860 TMTC3Q6ZXV5 915 aa15.85■□□□□ 0.13
CACNB3-209ENST00000548860 PROCA1Q8NCQ7 364 aaPredicted RBP15.85■□□□□ 0.13
CACNB3-209ENST00000548860 TMEM60Q9H2L4 133 aa15.85■□□□□ 0.13
CACNB3-209ENST00000548860 LTN1O94822 1766 aa15.85■□□□□ 0.13
CACNB3-209ENST00000548860 MFAP3LO75121 409 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 ZSCAN26Q16670 478 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 SND1Q7KZF4 910 aaKnown RBP eCLIP15.84■□□□□ 0.13
CACNB3-209ENST00000548860 HDXQ7Z353 690 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 SPAG5Q96R06 1193 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 TRIM31Q9BZY9 425 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 CDC23Q9UJX2 597 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 NALCNQ8IZF0 1738 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 ACTN4O43707 911 aaKnown RBP15.84■□□□□ 0.13
CACNB3-209ENST00000548860 C2orf54Q08AI8 447 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 KRT79Q5XKE5 535 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 PTF1AQ7RTS3 328 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 ADAT2Q7Z6V5 191 aaKnown RBP15.84■□□□□ 0.13
CACNB3-209ENST00000548860 CNBD1Q8NA66 436 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 SMIM23A6NLE4 172 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 UTP14CQ5TAP6 766 aaKnown RBP15.84■□□□□ 0.13
CACNB3-209ENST00000548860 KCTD16Q68DU8 428 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 CC2D1AQ6P1N0 951 aaPredicted RBP15.84■□□□□ 0.13
CACNB3-209ENST00000548860 MAATS1Q7Z4T9 603 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 SRGAP1Q7Z6B7 1085 aa15.84■□□□□ 0.13
CACNB3-209ENST00000548860 MARCH10Q8NA82 808 aaPredicted RBP15.84■□□□□ 0.13
CACNB3-209ENST00000548860 GSDMAQ96QA5 445 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms