RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 TOP1P11387 765 aaKnown RBP18.59■□□□□ 0.57
DDX54-205ENST00000548786 PCP11498 1178 aaKnown RBP18.59■□□□□ 0.57
DDX54-205ENST00000548786 STAT2P52630 851 aa18.59■□□□□ 0.57
DDX54-205ENST00000548786 DPP9Q86TI2 863 aa18.59■□□□□ 0.57
DDX54-205ENST00000548786 U2AF1L4Q8WU68 220 aaKnown RBP18.59■□□□□ 0.57
DDX54-205ENST00000548786 GMCL1Q96IK5 515 aa18.59■□□□□ 0.57
DDX54-205ENST00000548786 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.59■□□□□ 0.57
DDX54-205ENST00000548786 MROH8Q9H579 483 aa18.59■□□□□ 0.57
DDX54-205ENST00000548786 COBLO75128 1261 aa18.58■□□□□ 0.56
DDX54-205ENST00000548786 GJB1P08034 283 aa18.58■□□□□ 0.56
DDX54-205ENST00000548786 XRCC5P13010 732 aaKnown RBP18.58■□□□□ 0.56
DDX54-205ENST00000548786 RCSD1Q6JBY9 416 aa18.58■□□□□ 0.56
DDX54-205ENST00000548786 RIOX2Q8IUF8 465 aa18.58■□□□□ 0.56
DDX54-205ENST00000548786 MMP19Q99542 508 aa18.58■□□□□ 0.56
DDX54-205ENST00000548786 TEX13BQ9BXU2 312 aa18.58■□□□□ 0.56
DDX54-205ENST00000548786 GPCPD1Q9NPB8 672 aa18.58■□□□□ 0.56
DDX54-205ENST00000548786 HOMER2Q9NSB8 354 aa18.58■□□□□ 0.56
DDX54-205ENST00000548786 TCP11L1Q9NUJ3 509 aa18.58■□□□□ 0.56
DDX54-205ENST00000548786 RIPK3Q9Y572 518 aa18.58■□□□□ 0.56
DDX54-205ENST00000548786 TAF6LQ9Y6J9 622 aa18.58■□□□□ 0.56
DDX54-205ENST00000548786 SLC25A27O95847 323 aa18.57■□□□□ 0.56
DDX54-205ENST00000548786 TFRCP02786 760 aaKnown RBP18.57■□□□□ 0.56
DDX54-205ENST00000548786 CENPBP07199 599 aaPredicted RBP18.57■□□□□ 0.56
DDX54-205ENST00000548786 PGK2P07205 417 aa18.57■□□□□ 0.56
DDX54-205ENST00000548786 FCER1AP12319 257 aa18.57■□□□□ 0.56
DDX54-205ENST00000548786 CYP2C19P33261 490 aa18.57■□□□□ 0.56
DDX54-205ENST00000548786 SLC16A2P36021 539 aa18.57■□□□□ 0.56
DDX54-205ENST00000548786 GJA8P48165 433 aa18.57■□□□□ 0.56
DDX54-205ENST00000548786 NOVP48745 357 aa18.57■□□□□ 0.56
DDX54-205ENST00000548786 CACNB2Q08289 660 aaPredicted RBP18.57■□□□□ 0.56
DDX54-205ENST00000548786 TTBK2Q6IQ55 1244 aa18.57■□□□□ 0.56
DDX54-205ENST00000548786 CCDC174Q6PII3 467 aa18.57■□□□□ 0.56
DDX54-205ENST00000548786 SLC38A10Q9HBR0 1119 aa18.57■□□□□ 0.56
DDX54-205ENST00000548786 HMX1Q9NP08 348 aaPredicted RBP18.57■□□□□ 0.56
DDX54-205ENST00000548786 CYP21A2P08686 494 aa18.56■□□□□ 0.56
DDX54-205ENST00000548786 TAL1P17542 331 aaPredicted RBP18.56■□□□□ 0.56
DDX54-205ENST00000548786 CCND3P30281 292 aaPredicted RBP18.56■□□□□ 0.56
DDX54-205ENST00000548786 BMP2KLQ5H9B9 411 aa18.56■□□□□ 0.56
DDX54-205ENST00000548786 IQCA1Q86XH1 822 aa18.56■□□□□ 0.56
DDX54-205ENST00000548786 TRMT44Q8IYL2 757 aaKnown RBP18.56■□□□□ 0.56
DDX54-205ENST00000548786 CHURC1Q8WUH1 139 aa18.56■□□□□ 0.56
DDX54-205ENST00000548786 DCAF4Q8WV16 495 aa18.56■□□□□ 0.56
DDX54-205ENST00000548786 PAK6Q9NQU5 681 aaPredicted RBP18.56■□□□□ 0.56
DDX54-205ENST00000548786 ZSWIM5Q9P217 1185 aa18.56■□□□□ 0.56
DDX54-205ENST00000548786 U3KPZ7 1027 aaPredicted RBP18.56■□□□□ 0.56
DDX54-205ENST00000548786 ZNF236Q9UL36 1845 aa18.56■□□□□ 0.56
DDX54-205ENST00000548786 RPTORQ8N122 1335 aa18.55■□□□□ 0.56
DDX54-205ENST00000548786 STRNO43815 780 aa18.55■□□□□ 0.56
DDX54-205ENST00000548786 SGPL1O95470 568 aa18.55■□□□□ 0.56
DDX54-205ENST00000548786 KCTD2Q14681 263 aa18.55■□□□□ 0.56
DDX54-205ENST00000548786 MFSD14CQ5VZR4 134 aa18.55■□□□□ 0.56
DDX54-205ENST00000548786 KIAA1211Q6ZU35 1233 aa18.55■□□□□ 0.56
DDX54-205ENST00000548786 FAM160B2Q86V87 743 aa18.55■□□□□ 0.56
DDX54-205ENST00000548786 ZSCAN10Q96SZ4 725 aaPredicted RBP18.55■□□□□ 0.56
DDX54-205ENST00000548786 ESYT1Q9BSJ8 1104 aa18.55■□□□□ 0.56
DDX54-205ENST00000548786 KRT23Q9C075 422 aa18.55■□□□□ 0.56
DDX54-205ENST00000548786 CNNM2Q9H8M5 875 aa18.55■□□□□ 0.56
DDX54-205ENST00000548786 PRR12Q9ULL5 1215 aa18.55■□□□□ 0.56
DDX54-205ENST00000548786 RBM8AQ9Y5S9 174 aaKnown RBP18.55■□□□□ 0.56
DDX54-205ENST00000548786 TNKSO95271 1327 aa18.54■□□□□ 0.56
DDX54-205ENST00000548786 PDE4DIPQ5VU43 2346 aa18.54■□□□□ 0.56
DDX54-205ENST00000548786 HOXC6P09630 235 aa18.54■□□□□ 0.56
DDX54-205ENST00000548786 GOLGA8HP0CJ92 632 aa18.54■□□□□ 0.56
DDX54-205ENST00000548786 MAP3K21Q5TCX8 1036 aa18.54■□□□□ 0.56
DDX54-205ENST00000548786 CYB5R4Q7L1T6 521 aa18.54■□□□□ 0.56
DDX54-205ENST00000548786 ENAHQ8N8S7 591 aaPredicted RBP18.54■□□□□ 0.56
DDX54-205ENST00000548786 AGBL1Q96MI9 1066 aa18.54■□□□□ 0.56
DDX54-205ENST00000548786 UBAC1Q9BSL1 405 aa18.54■□□□□ 0.56
DDX54-205ENST00000548786 PDHBP11177 359 aa18.53■□□□□ 0.56
DDX54-205ENST00000548786 CNGA1P29973 690 aa18.53■□□□□ 0.56
DDX54-205ENST00000548786 TRDNQ13061 729 aa18.53■□□□□ 0.56
DDX54-205ENST00000548786 ABRAQ8N0Z2 381 aa18.53■□□□□ 0.56
DDX54-205ENST00000548786 TTC14Q96N46 770 aa18.53■□□□□ 0.56
DDX54-205ENST00000548786 KAT14Q9H8E8 782 aa18.53■□□□□ 0.56
DDX54-205ENST00000548786 ANO2Q9NQ90 1003 aa18.53■□□□□ 0.56
DDX54-205ENST00000548786 E7EWF7 191 aa18.52■□□□□ 0.56
DDX54-205ENST00000548786 FARP2O94887 1054 aaPredicted RBP18.52■□□□□ 0.56
DDX54-205ENST00000548786 COPB2P35606 906 aa18.52■□□□□ 0.56
DDX54-205ENST00000548786 SYDE2Q5VT97 1194 aa18.52■□□□□ 0.56
DDX54-205ENST00000548786 STOX1Q6ZVD7 989 aa18.52■□□□□ 0.56
DDX54-205ENST00000548786 CHST3Q7LGC8 479 aa18.52■□□□□ 0.56
DDX54-205ENST00000548786 DGKHQ86XP1 1220 aa18.52■□□□□ 0.56
DDX54-205ENST00000548786 PNMA1Q8ND90 353 aa18.52■□□□□ 0.56
DDX54-205ENST00000548786 MAP4K1Q92918 833 aa18.52■□□□□ 0.56
DDX54-205ENST00000548786 MAML3Q96JK9 1138 aa18.52■□□□□ 0.56
DDX54-205ENST00000548786 LSG1Q9H089 658 aaKnown RBP18.52■□□□□ 0.56
DDX54-205ENST00000548786 CPVLQ9H3G5 476 aa18.52■□□□□ 0.56
DDX54-205ENST00000548786 SLC5A4Q9NY91 659 aa18.52■□□□□ 0.56
DDX54-205ENST00000548786 ZNFX1Q9P2E3 1918 aaKnown RBP18.52■□□□□ 0.56
DDX54-205ENST00000548786 ZNF536O15090 1300 aa18.51■□□□□ 0.55
DDX54-205ENST00000548786 ATP2A1O14983 1001 aa18.51■□□□□ 0.55
DDX54-205ENST00000548786 ALAS1P13196 640 aa18.51■□□□□ 0.55
DDX54-205ENST00000548786 ZNF543Q08ER8 600 aa18.51■□□□□ 0.55
DDX54-205ENST00000548786 PRAMEF19Q5SWL8 479 aa18.51■□□□□ 0.55
DDX54-205ENST00000548786 RALYLQ86SE5 291 aaKnown RBP18.51■□□□□ 0.55
DDX54-205ENST00000548786 ANKRD35Q8N283 1001 aa18.51■□□□□ 0.55
DDX54-205ENST00000548786 TRPV1Q8NER1 839 aa18.51■□□□□ 0.55
DDX54-205ENST00000548786 DIS3LQ8TF46 1054 aaKnown RBP18.51■□□□□ 0.55
DDX54-205ENST00000548786 DDX11Q96FC9 970 aa18.51■□□□□ 0.55
DDX54-205ENST00000548786 PLXNA1Q9UIW2 1896 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms