RNA–Protein interactions for RNA: ENST00000548664.1

VDR-205, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-205ENST00000548664 PBX4Q9BYU1 374 aa20.36■□□□□ 0.85
VDR-205ENST00000548664 KANSL2Q9H9L4 492 aa20.36■□□□□ 0.85
VDR-205ENST00000548664 GOPCQ9HD26 462 aa20.36■□□□□ 0.85
VDR-205ENST00000548664 FAM184BQ9ULE4 1060 aa20.36■□□□□ 0.85
VDR-205ENST00000548664 MROH7Q68CQ1 1323 aa20.35■□□□□ 0.85
VDR-205ENST00000548664 ADD2P35612 726 aa20.35■□□□□ 0.85
VDR-205ENST00000548664 PBX2P40425 430 aa20.35■□□□□ 0.85
VDR-205ENST00000548664 RASIP1Q5U651 963 aa20.35■□□□□ 0.85
VDR-205ENST00000548664 MAMDC4Q6UXC1 1216 aa20.35■□□□□ 0.85
VDR-205ENST00000548664 MYO9BQ13459 2157 aa20.35■□□□□ 0.85
VDR-205ENST00000548664 ELP1O95163 1332 aa20.34■□□□□ 0.85
VDR-205ENST00000548664 DNAJC25-GNG10A0A024R161 153 aa20.34■□□□□ 0.85
VDR-205ENST00000548664 USP17L12C9JPN9 530 aa20.34■□□□□ 0.85
VDR-205ENST00000548664 USP17L21D6R901 530 aa20.34■□□□□ 0.85
VDR-205ENST00000548664 DUSP11O75319 330 aaKnown RBP20.34■□□□□ 0.85
VDR-205ENST00000548664 CST5P28325 142 aaPredicted RBP20.34■□□□□ 0.85
VDR-205ENST00000548664 CDK7P50613 346 aa20.34■□□□□ 0.85
VDR-205ENST00000548664 IRX5P78411 483 aaPredicted RBP20.34■□□□□ 0.85
VDR-205ENST00000548664 PPIGQ13427 754 aaKnown RBP eCLIP20.34■□□□□ 0.85
VDR-205ENST00000548664 HSP90AB4PQ58FF6 505 aa20.34■□□□□ 0.85
VDR-205ENST00000548664 TMEM240Q5SV17 173 aa20.34■□□□□ 0.85
VDR-205ENST00000548664 ATXN2LQ8WWM7 1075 aaKnown RBP20.34■□□□□ 0.85
VDR-205ENST00000548664 GLT1D1Q96MS3 346 aa20.34■□□□□ 0.85
VDR-205ENST00000548664 GAS2L1Q99501 681 aaPredicted RBP20.34■□□□□ 0.85
VDR-205ENST00000548664 GRXCR1A8MXD5 290 aa20.33■□□□□ 0.85
VDR-205ENST00000548664 CCER2I3L3R5 266 aa20.33■□□□□ 0.85
VDR-205ENST00000548664 ADCY6O43306 1168 aa20.33■□□□□ 0.85
VDR-205ENST00000548664 AMOTL1Q8IY63 956 aa20.33■□□□□ 0.85
VDR-205ENST00000548664 CLASRPQ8N2M8 674 aaKnown RBP20.33■□□□□ 0.85
VDR-205ENST00000548664 TEX13BQ9BXU2 312 aa20.33■□□□□ 0.85
VDR-205ENST00000548664 ZHX1Q9UKY1 873 aaPredicted RBP20.33■□□□□ 0.85
VDR-205ENST00000548664 RIPK3Q9Y572 518 aa20.33■□□□□ 0.85
VDR-205ENST00000548664 ZBED9Q6R2W3 1325 aa20.32■□□□□ 0.84
VDR-205ENST00000548664 RAD21O60216 631 aa20.32■□□□□ 0.84
VDR-205ENST00000548664 CSF2RAP15509 400 aa20.32■□□□□ 0.84
VDR-205ENST00000548664 AKNAD1Q5T1N1 836 aa20.32■□□□□ 0.84
VDR-205ENST00000548664 SNRNP48Q6IEG0 339 aaKnown RBP20.32■□□□□ 0.84
VDR-205ENST00000548664 CCDC174Q6PII3 467 aa20.32■□□□□ 0.84
VDR-205ENST00000548664 CCDC129Q6ZRS4 1044 aa20.32■□□□□ 0.84
VDR-205ENST00000548664 ZNF467Q7Z7K2 595 aaPredicted RBP20.32■□□□□ 0.84
VDR-205ENST00000548664 PPM1EQ8WY54 764 aa20.32■□□□□ 0.84
VDR-205ENST00000548664 SLF1Q9BQI6 1058 aa20.32■□□□□ 0.84
VDR-205ENST00000548664 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.32■□□□□ 0.84
VDR-205ENST00000548664 PRDM12Q9H4Q4 367 aa20.32■□□□□ 0.84
VDR-205ENST00000548664 PAG1Q9NWQ8 432 aa20.32■□□□□ 0.84
VDR-205ENST00000548664 THEGQ9P2T0 379 aa20.32■□□□□ 0.84
VDR-205ENST00000548664 CHD9Q3L8U1 2897 aa20.32■□□□□ 0.84
VDR-205ENST00000548664 CHGBP05060 677 aa20.31■□□□□ 0.84
VDR-205ENST00000548664 ASGR1P07306 291 aa20.31■□□□□ 0.84
VDR-205ENST00000548664 IFIT2P09913 472 aaKnown RBP20.31■□□□□ 0.84
VDR-205ENST00000548664 C6orf222P0C671 652 aaPredicted RBP20.31■□□□□ 0.84
VDR-205ENST00000548664 TMEM199Q8N511 208 aa20.31■□□□□ 0.84
VDR-205ENST00000548664 PCSK9Q8NBP7 692 aaKnown RBP20.31■□□□□ 0.84
VDR-205ENST00000548664 KIF1BPQ96EK5 621 aa20.31■□□□□ 0.84
VDR-205ENST00000548664 DDX11Q96FC9 970 aa20.31■□□□□ 0.84
VDR-205ENST00000548664 ASB2Q96Q27 587 aa20.31■□□□□ 0.84
VDR-205ENST00000548664 NUP88Q99567 741 aaPredicted RBP20.31■□□□□ 0.84
VDR-205ENST00000548664 ACVR2BQ13705 512 aa20.3■□□□□ 0.84
VDR-205ENST00000548664 CTR9Q6PD62 1173 aa20.3■□□□□ 0.84
VDR-205ENST00000548664 PSRC1Q6PGN9 363 aaPredicted RBP20.3■□□□□ 0.84
VDR-205ENST00000548664 ZNF365Q70YC5 407 aa20.3■□□□□ 0.84
VDR-205ENST00000548664 FAM126BQ8IXS8 530 aa20.3■□□□□ 0.84
VDR-205ENST00000548664 PPP1R12CQ9BZL4 782 aa20.3■□□□□ 0.84
VDR-205ENST00000548664 UPF3AQ9H1J1 476 aaKnown RBP20.3■□□□□ 0.84
VDR-205ENST00000548664 LRRC37A2A6NM11 1700 aa20.3■□□□□ 0.84
VDR-205ENST00000548664 REV3LO60673 3130 aa20.29■□□□□ 0.84
VDR-205ENST00000548664 A0A0U1RQG5 324 aaPredicted RBP20.29■□□□□ 0.84
VDR-205ENST00000548664 ARVCFO00192 962 aa20.29■□□□□ 0.84
VDR-205ENST00000548664 APBB1O00213 710 aa20.29■□□□□ 0.84
VDR-205ENST00000548664 ATP2A1O14983 1001 aa20.29■□□□□ 0.84
VDR-205ENST00000548664 ACRP10323 421 aa20.29■□□□□ 0.84
VDR-205ENST00000548664 GJA9P57773 515 aa20.29■□□□□ 0.84
VDR-205ENST00000548664 ADGRE1Q14246 886 aa20.29■□□□□ 0.84
VDR-205ENST00000548664 CCDC144BQ3MJ40 725 aa20.29■□□□□ 0.84
VDR-205ENST00000548664 DDRGK1Q96HY6 314 aa20.29■□□□□ 0.84
VDR-205ENST00000548664 FGD4Q96M96 766 aa20.29■□□□□ 0.84
VDR-205ENST00000548664 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.29■□□□□ 0.84
VDR-205ENST00000548664 BOLA2Q9H3K6 86 aa20.29■□□□□ 0.84
VDR-205ENST00000548664 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.29■□□□□ 0.84
VDR-205ENST00000548664 UBE3CQ15386 1083 aa20.28■□□□□ 0.84
VDR-205ENST00000548664 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.28■□□□□ 0.84
VDR-205ENST00000548664 ADAMTS19Q8TE59 1207 aa20.28■□□□□ 0.84
VDR-205ENST00000548664 ABHD16BQ9H3Z7 469 aa20.28■□□□□ 0.84
VDR-205ENST00000548664 CHD7Q9P2D1 2997 aa20.28■□□□□ 0.84
VDR-205ENST00000548664 RAPGEFL1Q9UHV5 662 aa20.28■□□□□ 0.84
VDR-205ENST00000548664 SLC4A4Q9Y6R1 1079 aa20.28■□□□□ 0.84
VDR-205ENST00000548664 CTAGE5O15320 804 aa20.27■□□□□ 0.84
VDR-205ENST00000548664 CD4P01730 458 aa20.27■□□□□ 0.84
VDR-205ENST00000548664 GNASQ5JWF2 1037 aa20.27■□□□□ 0.84
VDR-205ENST00000548664 CPXCR1Q8N123 301 aa20.27■□□□□ 0.84
VDR-205ENST00000548664 PRPF38AQ8NAV1 312 aaKnown RBP20.27■□□□□ 0.84
VDR-205ENST00000548664 VTI1AQ96AJ9 217 aa20.27■□□□□ 0.84
VDR-205ENST00000548664 SPC25Q9HBM1 224 aa20.27■□□□□ 0.84
VDR-205ENST00000548664 ARPP21Q9UBL0 812 aaPredicted RBP20.27■□□□□ 0.84
VDR-205ENST00000548664 TCF20Q9UGU0 1960 aaKnown RBP20.26■□□□□ 0.83
VDR-205ENST00000548664 XIRP2A4UGR9 3374 aa20.26■□□□□ 0.83
VDR-205ENST00000548664 F5H6K3 240 aa20.26■□□□□ 0.83
VDR-205ENST00000548664 TLR3O15455 904 aaKnown RBP20.26■□□□□ 0.83
VDR-205ENST00000548664 NDUFB10O96000 172 aa20.26■□□□□ 0.83
VDR-205ENST00000548664 ATP5JP18859 108 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms