RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 TFRCP02786 760 aaKnown RBP11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 MYL1P05976 194 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 AARSP49588 968 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 USP14P54578 494 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 KCNB1Q14721 858 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 MAP9Q49MG5 647 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 PAPD7Q5XG87 772 aaKnown RBP11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 WWC2Q6AWC2 1192 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 NCAPH2Q6IBW4 605 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 IRF2BP1Q8IU81 584 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 EHBP1Q8NDI1 1231 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 ZNF507Q8TCN5 953 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 THAP9Q9H5L6 903 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 ABCF2Q9UG63 623 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 LUC7L2Q9Y383 392 aaKnown RBP11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 PHLPP1O60346 1717 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 PDS5AQ29RF7 1337 aaKnown RBP11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 TARSL2A2RTX5 802 aaKnown RBP11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 LRRIQ3A6PVS8 624 aaPredicted RBP11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 ORC4O43929 436 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 CALML3P27482 149 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 MCM7P33993 719 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 KRT83P78385 493 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 TSR1Q2NL82 804 aaKnown RBP11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 SRLQ86TD4 932 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 C4orf32Q8N8J7 132 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 TRERF1Q96PN7 1200 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 GUCA1BQ9UMX6 200 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 GDAQ9Y2T3 454 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 SAR1BQ9Y6B6 198 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 MYO1CO00159 1063 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 STAT6P42226 847 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 CKAP4Q07065 602 aaKnown RBP11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 MEA1Q16626 185 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 CTR9Q6PD62 1173 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 NOC3LQ8WTT2 800 aaKnown RBP11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 RASSF4Q9H2L5 321 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 DISC1Q9NRI5 854 aa11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 MKRN1Q9UHC7 482 aaKnown RBP11.1□□□□□ -0.63
SMARCD1-205ENST00000548573 CYP2D7A0A087X1C5 515 aa11.09□□□□□ -0.63
SMARCD1-205ENST00000548573 DNM2P50570 870 aa11.09□□□□□ -0.63
SMARCD1-205ENST00000548573 HERVK_113P62684 666 aa11.09□□□□□ -0.63
SMARCD1-205ENST00000548573 DYNLL1P63167 89 aaKnown RBP11.09□□□□□ -0.63
SMARCD1-205ENST00000548573 STIM1Q13586 685 aa11.09□□□□□ -0.63
SMARCD1-205ENST00000548573 UBE4AQ14139 1066 aa11.09□□□□□ -0.63
SMARCD1-205ENST00000548573 WDR59Q6PJI9 974 aa11.09□□□□□ -0.63
SMARCD1-205ENST00000548573 RETREG2Q8NC44 543 aa11.09□□□□□ -0.63
SMARCD1-205ENST00000548573 NUP58Q9BVL2 599 aa11.09□□□□□ -0.63
SMARCD1-205ENST00000548573 SH3GLB2Q9NR46 395 aa11.09□□□□□ -0.63
SMARCD1-205ENST00000548573 TRIM10Q9UDY6 481 aa11.09□□□□□ -0.63
SMARCD1-205ENST00000548573 COL1A1P02452 1464 aaPredicted RBP11.09□□□□□ -0.63
SMARCD1-205ENST00000548573 BAZ2AQ9UIF9 1905 aaKnown RBP11.09□□□□□ -0.63
SMARCD1-205ENST00000548573 KRT86O43790 486 aa11.08□□□□□ -0.63
SMARCD1-205ENST00000548573 NTSR2O95665 410 aa11.08□□□□□ -0.63
SMARCD1-205ENST00000548573 CYLC1P35663 651 aaPredicted RBP11.08□□□□□ -0.63
SMARCD1-205ENST00000548573 CCDC122Q5T0U0 273 aa11.08□□□□□ -0.63
SMARCD1-205ENST00000548573 MAGEC2Q9UBF1 373 aaPredicted RBP11.08□□□□□ -0.63
SMARCD1-205ENST00000548573 MAPK8IP1Q9UQF2 711 aa11.08□□□□□ -0.63
SMARCD1-205ENST00000548573 RRP15Q9Y3B9 282 aaKnown RBP11.08□□□□□ -0.63
SMARCD1-205ENST00000548573 A0A1B0GUL6 1792 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 ANO9A1A5B4 782 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 TRIM49BA6NDI0 452 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 USP17L12C9JPN9 530 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 USP17L21D6R901 530 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 PSMA7O14818 248 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 RHOBTB3O94955 611 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 ATP1A1P05023 1023 aaKnown RBP11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 SRGNP10124 158 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 KIF5BP33176 963 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 NAALADL2Q58DX5 795 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 CCDC170Q8IYT3 715 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 BLIDQ8IZY5 108 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 GIMAP8Q8ND71 665 aaPredicted RBP11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 MMS19Q96T76 1030 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 TTYH3Q9C0H2 523 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 PCDHA4Q9UN74 947 aa11.08□□□□□ -0.64
SMARCD1-205ENST00000548573 LAMB1P07942 1786 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 EIF3CLB5ME19 914 aaKnown RBP11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 ENC1O14682 589 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 KLRC4O43908 158 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 CAMTA2O94983 1202 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 SYF2O95926 243 aaKnown RBP11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 GYG1P46976 350 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 NT5C2P49902 561 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 CAVIN4Q5BKX8 364 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 INTS5Q6P9B9 1019 aaKnown RBP11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 DTHD1Q6ZMT9 781 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 KIAA1328Q86T90 577 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 GOLGA6L1Q8N7Z2 621 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 JAKMIP2Q96AA8 810 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 DHTKD1Q96HY7 919 aaPredicted RBP11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 EIF3CQ99613 913 aaKnown RBP11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 CCSER1Q9C0I3 900 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 FAM204AQ9H8W3 233 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 CCDC87Q9NVE4 849 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 KBTBD4Q9NVX7 518 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 LCMT1Q9UIC8 334 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 LAD1O00515 517 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms