RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 TRIM43BA6NCK2 446 aa18.18■□□□□ 0.5
SNX29P1-201ENST00000548357 ADCY6O43306 1168 aa18.18■□□□□ 0.5
SNX29P1-201ENST00000548357 ITGB8P26012 769 aa18.18■□□□□ 0.5
SNX29P1-201ENST00000548357 C9orf50Q5SZB4 431 aa18.18■□□□□ 0.5
SNX29P1-201ENST00000548357 ARRDC4Q8NCT1 418 aa18.18■□□□□ 0.5
SNX29P1-201ENST00000548357 TRIM43Q96BQ3 446 aaPredicted RBP18.18■□□□□ 0.5
SNX29P1-201ENST00000548357 GPATCH3Q96I76 525 aa18.18■□□□□ 0.5
SNX29P1-201ENST00000548357 SLC5A4Q9NY91 659 aa18.18■□□□□ 0.5
SNX29P1-201ENST00000548357 GBF1Q92538 1859 aa18.18■□□□□ 0.5
SNX29P1-201ENST00000548357 PLIN4Q96Q06 1357 aa18.17■□□□□ 0.5
SNX29P1-201ENST00000548357 CUL9Q8IWT3 2517 aa18.17■□□□□ 0.5
SNX29P1-201ENST00000548357 SNAI1O95863 264 aaPredicted RBP18.17■□□□□ 0.5
SNX29P1-201ENST00000548357 SLC4A3P48751 1232 aa18.17■□□□□ 0.5
SNX29P1-201ENST00000548357 KCTD2Q14681 263 aa18.17■□□□□ 0.5
SNX29P1-201ENST00000548357 ZMYM1Q5SVZ6 1142 aa18.17■□□□□ 0.5
SNX29P1-201ENST00000548357 GPR153Q6NV75 609 aa18.17■□□□□ 0.5
SNX29P1-201ENST00000548357 CPXCR1Q8N123 301 aa18.17■□□□□ 0.5
SNX29P1-201ENST00000548357 RAVER2Q9HCJ3 691 aaKnown RBP18.17■□□□□ 0.5
SNX29P1-201ENST00000548357 XPNPEP3Q9NQH7 507 aa18.17■□□□□ 0.5
SNX29P1-201ENST00000548357 PRDM5Q9NQX1 630 aaPredicted RBP18.17■□□□□ 0.5
SNX29P1-201ENST00000548357 MTMR4Q9NYA4 1195 aa18.17■□□□□ 0.5
SNX29P1-201ENST00000548357 PHF24Q9UPV7 400 aa18.17■□□□□ 0.5
SNX29P1-201ENST00000548357 DNAJC25-GNG10A0A024R161 153 aa18.16■□□□□ 0.5
SNX29P1-201ENST00000548357 MYADML2A6NDP7 307 aa18.16■□□□□ 0.5
SNX29P1-201ENST00000548357 PATL2C9JE40 543 aaKnown RBP18.16■□□□□ 0.5
SNX29P1-201ENST00000548357 APPP05067 770 aa18.16■□□□□ 0.5
SNX29P1-201ENST00000548357 ZFYP08048 801 aaPredicted RBP18.16■□□□□ 0.5
SNX29P1-201ENST00000548357 BADQ92934 168 aa18.16■□□□□ 0.5
SNX29P1-201ENST00000548357 KIFC2Q96AC6 838 aa18.16■□□□□ 0.5
SNX29P1-201ENST00000548357 TEX13BQ9BXU2 312 aa18.16■□□□□ 0.5
SNX29P1-201ENST00000548357 TTC41PQ6P2S7 1318 aa18.16■□□□□ 0.5
SNX29P1-201ENST00000548357 LAMA4Q16363 1823 aa18.15■□□□□ 0.5
SNX29P1-201ENST00000548357 ADAMTS4O75173 837 aa18.15■□□□□ 0.5
SNX29P1-201ENST00000548357 SHHQ15465 462 aa18.15■□□□□ 0.5
SNX29P1-201ENST00000548357 SLC17A8Q8NDX2 589 aa18.15■□□□□ 0.5
SNX29P1-201ENST00000548357 MKL1Q969V6 931 aa18.15■□□□□ 0.5
SNX29P1-201ENST00000548357 GUCD1Q96NT3 240 aa18.15■□□□□ 0.5
SNX29P1-201ENST00000548357 FSD1Q9BTV5 496 aa18.15■□□□□ 0.5
SNX29P1-201ENST00000548357 DIS3Q9Y2L1 958 aaKnown RBP18.15■□□□□ 0.5
SNX29P1-201ENST00000548357 DDX49Q9Y6V7 483 aaKnown RBP18.15■□□□□ 0.5
SNX29P1-201ENST00000548357 SYNRGQ9UMZ2 1314 aa18.15■□□□□ 0.5
SNX29P1-201ENST00000548357 A0A1W2PQ45 241 aaPredicted RBP18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 A0A1W2PQY0 241 aa18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 NMT2O60551 498 aa18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 RARBP10826 455 aa18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 GNAT2P19087 354 aa18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 TLE2Q04725 743 aa18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 CTDSPL2Q05D32 466 aa18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 PPARAQ07869 468 aa18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 VPS53Q5VIR6 699 aa18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 ZNF444Q8N0Y2 327 aaPredicted RBP18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 NEDD1Q8NHV4 660 aa18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 FAM161BQ96MY7 647 aa18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 CRBNQ96SW2 442 aa18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 LBHD1Q9BQE6 289 aaPredicted RBP18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 SLC38A10Q9HBR0 1119 aa18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNX29P1-201ENST00000548357 POTEB2H3BUK9 544 aa18.13■□□□□ 0.49
SNX29P1-201ENST00000548357 MX1P20591 662 aa18.13■□□□□ 0.49
SNX29P1-201ENST00000548357 EPHB4P54760 987 aa18.13■□□□□ 0.49
SNX29P1-201ENST00000548357 RRP1P56182 461 aaKnown RBP18.13■□□□□ 0.49
SNX29P1-201ENST00000548357 SNAP25P60880 206 aa18.13■□□□□ 0.49
SNX29P1-201ENST00000548357 PRPF38AQ8NAV1 312 aaKnown RBP18.13■□□□□ 0.49
SNX29P1-201ENST00000548357 NRBP1Q9UHY1 535 aa18.13■□□□□ 0.49
SNX29P1-201ENST00000548357 ATP2A1O14983 1001 aa18.12■□□□□ 0.49
SNX29P1-201ENST00000548357 TTLL1O95922 423 aa18.12■□□□□ 0.49
SNX29P1-201ENST00000548357 AKR1A1P14550 325 aa18.12■□□□□ 0.49
SNX29P1-201ENST00000548357 PTGS1P23219 599 aa18.12■□□□□ 0.49
SNX29P1-201ENST00000548357 TFAP4Q01664 338 aa18.12■□□□□ 0.49
SNX29P1-201ENST00000548357 SLFN13Q68D06 897 aa18.12■□□□□ 0.49
SNX29P1-201ENST00000548357 MAMDC4Q6UXC1 1216 aa18.12■□□□□ 0.49
SNX29P1-201ENST00000548357 GMCL1P1Q8NEA9 526 aa18.12■□□□□ 0.49
SNX29P1-201ENST00000548357 IL17RBQ9NRM6 502 aa18.12■□□□□ 0.49
SNX29P1-201ENST00000548357 HOMER2Q9NSB8 354 aa18.12■□□□□ 0.49
SNX29P1-201ENST00000548357 PRKAG2Q9UGJ0 569 aa18.12■□□□□ 0.49
SNX29P1-201ENST00000548357 ZHX1Q9UKY1 873 aaPredicted RBP18.12■□□□□ 0.49
SNX29P1-201ENST00000548357 STXBP5LQ9Y2K9 1186 aa18.12■□□□□ 0.49
SNX29P1-201ENST00000548357 ZNF536O15090 1300 aa18.12■□□□□ 0.49
SNX29P1-201ENST00000548357 MYH6P13533 1939 aa18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 ZBED4O75132 1171 aa18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 TSPY3P0CV98 308 aa18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 TSPY8P0CW00 308 aa18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 COPB2P35606 906 aa18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 CNTN2Q02246 1040 aa18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 C1orf53Q5VUE5 145 aa18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 CCSAPQ6IQ19 270 aaPredicted RBP18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 KATNBL1Q9H079 304 aa18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 NAPBQ9H115 298 aa18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 FEM1BQ9UK73 627 aa18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 ASTN1O14525 1302 aa18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 SYNGAP1Q96PV0 1343 aa18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 MYO9BQ13459 2157 aa18.11■□□□□ 0.49
SNX29P1-201ENST00000548357 TMEM232C9JQI7 657 aa18.1■□□□□ 0.49
SNX29P1-201ENST00000548357 ERC2O15083 957 aa18.1■□□□□ 0.49
SNX29P1-201ENST00000548357 PQBP1O60828 265 aaKnown RBP18.1■□□□□ 0.49
SNX29P1-201ENST00000548357 BMP3P12645 472 aa18.1■□□□□ 0.49
SNX29P1-201ENST00000548357 KLHDC9Q8NEP7 349 aa18.1■□□□□ 0.49
SNX29P1-201ENST00000548357 DDX11Q96FC9 970 aa18.1■□□□□ 0.49
SNX29P1-201ENST00000548357 AGBL1Q96MI9 1066 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms