RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 TRIM47Q96LD4 638 aa20.27■□□□□ 0.84
HDAC7-227ENST00000548080 GPHNQ9NQX3 736 aaPredicted RBP20.27■□□□□ 0.84
HDAC7-227ENST00000548080 CHMP5Q9NZZ3 219 aa20.27■□□□□ 0.84
HDAC7-227ENST00000548080 A0A0G2JMZ2 1700 aa20.27■□□□□ 0.83
HDAC7-227ENST00000548080 FRMPD2Q68DX3 1309 aaPredicted RBP20.26■□□□□ 0.83
HDAC7-227ENST00000548080 TMEM232C9JQI7 657 aa20.26■□□□□ 0.83
HDAC7-227ENST00000548080 SH2B2O14492 632 aaPredicted RBP20.26■□□□□ 0.83
HDAC7-227ENST00000548080 SLC1A4P43007 532 aa20.26■□□□□ 0.83
HDAC7-227ENST00000548080 OTOP1Q7RTM1 612 aa20.26■□□□□ 0.83
HDAC7-227ENST00000548080 CTU1Q7Z7A3 348 aaKnown RBP20.26■□□□□ 0.83
HDAC7-227ENST00000548080 CCDC83Q8IWF9 413 aa20.26■□□□□ 0.83
HDAC7-227ENST00000548080 IGDCC4Q8TDY8 1250 aa20.26■□□□□ 0.83
HDAC7-227ENST00000548080 ZNF274Q96GC6 653 aaPredicted RBP20.26■□□□□ 0.83
HDAC7-227ENST00000548080 EFCC1Q9HA90 598 aa20.26■□□□□ 0.83
HDAC7-227ENST00000548080 CIZ1Q9ULV3 898 aaPredicted RBP20.26■□□□□ 0.83
HDAC7-227ENST00000548080 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.26■□□□□ 0.83
HDAC7-227ENST00000548080 DOCK3Q8IZD9 2030 aa20.26■□□□□ 0.83
HDAC7-227ENST00000548080 IFIT3O14879 490 aaKnown RBP20.25■□□□□ 0.83
HDAC7-227ENST00000548080 FMNL1O95466 1100 aaPredicted RBP20.25■□□□□ 0.83
HDAC7-227ENST00000548080 ERVK-9P63128 1117 aa20.25■□□□□ 0.83
HDAC7-227ENST00000548080 ERVK-24P63145 666 aa20.25■□□□□ 0.83
HDAC7-227ENST00000548080 IKQ13123 557 aaPredicted RBP20.25■□□□□ 0.83
HDAC7-227ENST00000548080 KIF22Q14807 665 aa20.25■□□□□ 0.83
HDAC7-227ENST00000548080 SEC23AQ15436 765 aa20.25■□□□□ 0.83
HDAC7-227ENST00000548080 TMEM67Q5HYA8 995 aa20.25■□□□□ 0.83
HDAC7-227ENST00000548080 NECAB1Q8N987 351 aa20.25■□□□□ 0.83
HDAC7-227ENST00000548080 KIFC2Q96AC6 838 aa20.25■□□□□ 0.83
HDAC7-227ENST00000548080 KAT14Q9H8E8 782 aa20.25■□□□□ 0.83
HDAC7-227ENST00000548080 GPCPD1Q9NPB8 672 aa20.25■□□□□ 0.83
HDAC7-227ENST00000548080 MORF4L1Q9UBU8 362 aa20.25■□□□□ 0.83
HDAC7-227ENST00000548080 PPP1R9AQ9ULJ8 1098 aa20.25■□□□□ 0.83
HDAC7-227ENST00000548080 PFKFB2O60825 505 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 PLS1Q14651 629 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 SART3Q15020 963 aaKnown RBP20.24■□□□□ 0.83
HDAC7-227ENST00000548080 IFIT1BQ5T764 474 aaKnown RBP20.24■□□□□ 0.83
HDAC7-227ENST00000548080 TTBK2Q6IQ55 1244 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 DGKHQ86XP1 1220 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 PNMA1Q8ND90 353 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 GPRC5AQ8NFJ5 357 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 GMCL1Q96IK5 515 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 SLF1Q9BQI6 1058 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 MCOLN1Q9GZU1 580 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 PORCNQ9H237 461 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 HOXC10Q9NYD6 342 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 SYNPO2Q9UMS6 1093 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 LIFRP42702 1097 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 SNAP25P60880 206 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 ST3GAL1Q11201 340 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 STK3Q13188 491 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 CCDC178Q5BJE1 867 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 LBX2Q6XYB7 198 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 RABGAP1Q9Y3P9 1069 aa20.24■□□□□ 0.83
HDAC7-227ENST00000548080 KLF18A0A0U1RQI7 1052 aa20.23■□□□□ 0.83
HDAC7-227ENST00000548080 ERICH2A1L162 156 aa20.23■□□□□ 0.83
HDAC7-227ENST00000548080 GOLGA8HP0CJ92 632 aa20.23■□□□□ 0.83
HDAC7-227ENST00000548080 PDHBP11177 359 aa20.23■□□□□ 0.83
HDAC7-227ENST00000548080 PDIA3P30101 505 aaKnown RBP20.23■□□□□ 0.83
HDAC7-227ENST00000548080 SLC16A2P36021 539 aa20.23■□□□□ 0.83
HDAC7-227ENST00000548080 TMTC2Q8N394 836 aa20.23■□□□□ 0.83
HDAC7-227ENST00000548080 DCAF4Q8WV16 495 aa20.23■□□□□ 0.83
HDAC7-227ENST00000548080 GTF3C6Q969F1 213 aa20.23■□□□□ 0.83
HDAC7-227ENST00000548080 LY9Q9HBG7 655 aa20.23■□□□□ 0.83
HDAC7-227ENST00000548080 BRPF3Q9ULD4 1205 aa20.23■□□□□ 0.83
HDAC7-227ENST00000548080 NAP1L2Q9ULW6 460 aaPredicted RBP20.23■□□□□ 0.83
HDAC7-227ENST00000548080 VWA5AO00534 786 aa20.22■□□□□ 0.83
HDAC7-227ENST00000548080 FCGRTP55899 365 aa20.22■□□□□ 0.83
HDAC7-227ENST00000548080 TMEM132BQ14DG7 1078 aa20.22■□□□□ 0.83
HDAC7-227ENST00000548080 WTAPQ15007 396 aa20.22■□□□□ 0.83
HDAC7-227ENST00000548080 WDR78Q5VTH9 848 aa20.22■□□□□ 0.83
HDAC7-227ENST00000548080 SGMS1Q86VZ5 419 aa20.22■□□□□ 0.83
HDAC7-227ENST00000548080 TNS4Q8IZW8 715 aa20.22■□□□□ 0.83
HDAC7-227ENST00000548080 GTF3C2Q8WUA4 911 aaPredicted RBP20.22■□□□□ 0.83
HDAC7-227ENST00000548080 ANKS1AQ92625 1134 aa20.22■□□□□ 0.83
HDAC7-227ENST00000548080 CPVLQ9H3G5 476 aa20.22■□□□□ 0.83
HDAC7-227ENST00000548080 FEM1BQ9UK73 627 aa20.22■□□□□ 0.83
HDAC7-227ENST00000548080 GABRQQ9UN88 632 aa20.22■□□□□ 0.83
HDAC7-227ENST00000548080 TNPO2O14787 897 aaKnown RBP20.21■□□□□ 0.83
HDAC7-227ENST00000548080 STAT2P52630 851 aa20.21■□□□□ 0.83
HDAC7-227ENST00000548080 NFXL1Q6ZNB6 911 aa20.21■□□□□ 0.83
HDAC7-227ENST00000548080 SMC3Q9UQE7 1217 aa20.21■□□□□ 0.83
HDAC7-227ENST00000548080 MYPNQ86TC9 1320 aa20.2■□□□□ 0.82
HDAC7-227ENST00000548080 PRKCZQ05513 592 aa20.2■□□□□ 0.82
HDAC7-227ENST00000548080 SCRN1Q12765 414 aa20.2■□□□□ 0.82
HDAC7-227ENST00000548080 PRPF38AQ8NAV1 312 aaKnown RBP20.2■□□□□ 0.82
HDAC7-227ENST00000548080 MOV10L1Q9BXT6 1211 aaKnown RBP20.2■□□□□ 0.82
HDAC7-227ENST00000548080 SPATC1LQ9H0A9 340 aa20.2■□□□□ 0.82
HDAC7-227ENST00000548080 CCDC69A6NI79 296 aa20.19■□□□□ 0.82
HDAC7-227ENST00000548080 GOLGA8BA8MQT2 603 aa20.19■□□□□ 0.82
HDAC7-227ENST00000548080 TAL1P17542 331 aaPredicted RBP20.19■□□□□ 0.82
HDAC7-227ENST00000548080 ZNF543Q08ER8 600 aa20.19■□□□□ 0.82
HDAC7-227ENST00000548080 RAB11FIP4Q86YS3 637 aa20.19■□□□□ 0.82
HDAC7-227ENST00000548080 CCAR1Q8IX12 1150 aaKnown RBP20.19■□□□□ 0.82
HDAC7-227ENST00000548080 CPXCR1Q8N123 301 aa20.19■□□□□ 0.82
HDAC7-227ENST00000548080 REPS2Q8NFH8 660 aa20.19■□□□□ 0.82
HDAC7-227ENST00000548080 MYL10Q9BUA6 226 aa20.19■□□□□ 0.82
HDAC7-227ENST00000548080 ADAMTS5Q9UNA0 930 aa20.19■□□□□ 0.82
HDAC7-227ENST00000548080 PTCH2Q9Y6C5 1203 aa20.19■□□□□ 0.82
HDAC7-227ENST00000548080 PLXNB2O15031 1838 aa20.19■□□□□ 0.82
HDAC7-227ENST00000548080 SNHG28P0DPA3 235 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 CCT2P78371 535 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms