RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 DDAH1O94760 285 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 CALM1P0DP23 149 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 CALM2P0DP24 149 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 CALM3P0DP25 149 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 CCNA1P78396 465 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 FGD1P98174 961 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 TROAPQ12815 778 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 ARHGEF6Q15052 776 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 POTEEQ6S8J3 1075 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 NFXL1Q6ZNB6 911 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 KIFC2Q96AC6 838 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 CHMP4CQ96CF2 233 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 TCEANC2Q96MN5 208 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 LRRC2Q9BYS8 371 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 AGXT2Q9BYV1 514 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 GPHNQ9NQX3 736 aaPredicted RBP13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 BTBD7Q9P203 1132 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 FRMPD2Q68DX3 1309 aaPredicted RBP13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 ZBED4O75132 1171 aa13.28□□□□□ -0.28
CALCOCO1-208ENST00000547988 GNRH1P01148 92 aa13.28□□□□□ -0.28
CALCOCO1-208ENST00000547988 CPA1P15085 419 aa13.28□□□□□ -0.28
CALCOCO1-208ENST00000547988 FCGRTP55899 365 aa13.28□□□□□ -0.28
CALCOCO1-208ENST00000547988 GRM4Q14833 912 aa13.28□□□□□ -0.28
CALCOCO1-208ENST00000547988 Q6ZUG5 572 aa13.28□□□□□ -0.28
CALCOCO1-208ENST00000547988 REPS2Q8NFH8 660 aa13.28□□□□□ -0.28
CALCOCO1-208ENST00000547988 CD99L2Q8TCZ2 262 aa13.28□□□□□ -0.28
CALCOCO1-208ENST00000547988 SLC38A10Q9HBR0 1119 aa13.28□□□□□ -0.28
CALCOCO1-208ENST00000547988 GPCPD1Q9NPB8 672 aa13.28□□□□□ -0.28
CALCOCO1-208ENST00000547988 PRR12Q9ULL5 1215 aa13.28□□□□□ -0.28
CALCOCO1-208ENST00000547988 SLC12A7Q9Y666 1083 aa13.28□□□□□ -0.28
CALCOCO1-208ENST00000547988 LCTP09848 1927 aa13.27□□□□□ -0.28
CALCOCO1-208ENST00000547988 PALM3A6NDB9 673 aaPredicted RBP13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 ATP2A1O14983 1001 aa13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 GOLGA8HP0CJ92 632 aa13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 RBM25P49756 843 aaKnown RBP13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 RCAN1P53805 252 aa13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 OAZ1P54368 228 aa13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 TMEM132BQ14DG7 1078 aa13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 SYDE2Q5VT97 1194 aa13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 TTBK2Q6IQ55 1244 aa13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 APOA5Q6Q788 366 aa13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 SYNE3Q6ZMZ3 975 aa13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 CTCFLQ8NI51 663 aaPredicted RBP13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 BACH2Q9BYV9 841 aa13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 C22orf23Q9BZE7 217 aa13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 UPF3BQ9BZI7 483 aaKnown RBP13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 SPATC1LQ9H0A9 340 aa13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 MAD2L2Q9UI95 211 aa13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 ZNF214Q9UL59 606 aaPredicted RBP13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 CTDP1Q9Y5B0 961 aaPredicted RBP13.27□□□□□ -0.29
CALCOCO1-208ENST00000547988 MCM3APO60318 1980 aa13.26□□□□□ -0.29
CALCOCO1-208ENST00000547988 PEX10O60683 326 aa13.26□□□□□ -0.29
CALCOCO1-208ENST00000547988 SLC25A27O95847 323 aa13.26□□□□□ -0.29
CALCOCO1-208ENST00000547988 MAPK4P31152 587 aa13.26□□□□□ -0.29
CALCOCO1-208ENST00000547988 KIF5BP33176 963 aa13.26□□□□□ -0.29
CALCOCO1-208ENST00000547988 COPB2P35606 906 aa13.26□□□□□ -0.29
CALCOCO1-208ENST00000547988 SLC16A2P36021 539 aa13.26□□□□□ -0.29
CALCOCO1-208ENST00000547988 PSMC4P43686 418 aa13.26□□□□□ -0.29
CALCOCO1-208ENST00000547988 Q3C1V9 767 aa13.26□□□□□ -0.29
CALCOCO1-208ENST00000547988 CCAR1Q8IX12 1150 aaKnown RBP13.26□□□□□ -0.29
CALCOCO1-208ENST00000547988 SHCBP1Q8NEM2 672 aa13.26□□□□□ -0.29
CALCOCO1-208ENST00000547988 NUP133Q8WUM0 1156 aa13.26□□□□□ -0.29
CALCOCO1-208ENST00000547988 TEX13BQ9BXU2 312 aa13.26□□□□□ -0.29
CALCOCO1-208ENST00000547988 RANBP17Q9H2T7 1088 aaKnown RBP13.26□□□□□ -0.29
CALCOCO1-208ENST00000547988 NID2Q14112 1375 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 KLF18A0A0U1RQI7 1052 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 KLRF2D3W0D1 207 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 TNPO2O14787 897 aaKnown RBP13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 ZBTB43O43298 467 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 CTGFP29279 349 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 STAT3P40763 770 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 GNAQP50148 359 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 EVCP57679 992 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 PLS1Q14651 629 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 CTU1Q7Z7A3 348 aaKnown RBP13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 MICU3Q86XE3 530 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 RIOX2Q8IUF8 465 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 STAG2Q8N3U4 1231 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 BRF1Q92994 677 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 COA7Q96BR5 231 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 TRIM47Q96LD4 638 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 MYL10Q9BUA6 226 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 MOV10L1Q9BXT6 1211 aaKnown RBP13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 ARHGAP39Q9C0H5 1083 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 PORCNQ9H237 461 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 ALDH8A1Q9H2A2 487 aaPredicted RBP13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 MROH8Q9H579 483 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 EFCC1Q9HA90 598 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 PDRG1Q9NUG6 133 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 PNMA2Q9UL42 364 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 BRPF3Q9ULD4 1205 aa13.25□□□□□ -0.29
CALCOCO1-208ENST00000547988 ZNF536O15090 1300 aa13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 FMNL1O95466 1100 aaPredicted RBP13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 HOXD10P28358 340 aa13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 SMARCA1P28370 1054 aa13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 PRMT2P55345 433 aa13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 CAP1Q01518 475 aa13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 APOBRQ0VD83 1088 aa13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 TOB2Q14106 344 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms