RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 CRNKL1Q9BZJ0 848 aaKnown RBP14.58□□□□□ -0.08
BRF1-210ENST00000547374 FAM107BQ9H098 131 aa14.58□□□□□ -0.08
BRF1-210ENST00000547374 WDR19Q8NEZ3 1342 aa14.58□□□□□ -0.08
BRF1-210ENST00000547374 NDUFA10O95299 355 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 SPA17Q15506 151 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 SLC51AQ86UW1 340 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 MAPKAPK5Q8IW41 473 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 NOC4LQ9BVI4 516 aaKnown RBP14.57□□□□□ -0.08
BRF1-210ENST00000547374 UBA5Q9GZZ9 404 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 NAPAP54920 295 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 PIP4K2BP78356 416 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 SF3A3Q12874 501 aaKnown RBP eCLIP14.57□□□□□ -0.08
BRF1-210ENST00000547374 CCDC47Q96A33 483 aaKnown RBP14.57□□□□□ -0.08
BRF1-210ENST00000547374 CCDC42Q96M95 316 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 MMS19Q96T76 1030 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 CCDC87Q9NVE4 849 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 RSRC2Q7L4I2 434 aaKnown RBP14.57□□□□□ -0.08
BRF1-210ENST00000547374 PLA2G12BQ9BX93 195 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 TMEM60Q9H2L4 133 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 ACBD3Q9H3P7 528 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 NLRC4Q9NPP4 1024 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 EXOC1Q9NV70 894 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 EHD2Q9NZN4 543 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 CRYBG1Q9Y4K1 1723 aa14.57□□□□□ -0.08
BRF1-210ENST00000547374 F8W031 263 aaPredicted RBP14.56□□□□□ -0.08
BRF1-210ENST00000547374 BRD3Q15059 726 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 LRRC41Q15345 812 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 ALX1Q15699 326 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 TNS3Q68CZ2 1445 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 PNMA1Q8ND90 353 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 PHF20Q9BVI0 1012 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 TCP11L1Q9NUJ3 509 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 SAR1BQ9Y6B6 198 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 STK36Q9NRP7 1315 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 FER1L4A9Z1Z3 1794 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 KCNQ2O43526 872 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 BUB1O43683 1085 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 MECOMQ03112 1051 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 C2CD5Q86YS7 1000 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 BLIDQ8IZY5 108 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 TGFBRAP1Q8WUH2 860 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 FCER1AP12319 257 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 TMTC3Q6ZXV5 915 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 RUFY1Q96T51 708 aa14.56□□□□□ -0.08
BRF1-210ENST00000547374 BIN2Q9UBW5 565 aaPredicted RBP14.56□□□□□ -0.08
BRF1-210ENST00000547374 LAMA4Q16363 1823 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 PRPF3O43395 683 aaKnown RBP14.55□□□□□ -0.08
BRF1-210ENST00000547374 PLEKP08567 350 aaPredicted RBP14.55□□□□□ -0.08
BRF1-210ENST00000547374 FGFR2P21802 821 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 SPAG1Q07617 926 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 TROAPQ12815 778 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 CACNA2D4Q7Z3S7 1137 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.55□□□□□ -0.08
BRF1-210ENST00000547374 GTPBP6O43824 516 aaPredicted RBP14.55□□□□□ -0.08
BRF1-210ENST00000547374 ZNF579Q8NAF0 562 aaKnown RBP14.55□□□□□ -0.08
BRF1-210ENST00000547374 GJA10Q969M2 543 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 MTRQ99707 1265 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 TUBGCP2Q9BSJ2 902 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 KCND1Q9NSA2 647 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 TMEM51Q9NW97 253 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 LRRIQ3A6PVS8 624 aaPredicted RBP14.55□□□□□ -0.08
BRF1-210ENST00000547374 KIF5BP33176 963 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 KIF5AQ12840 1032 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 DDB1Q16531 1140 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 BEND6Q5SZJ8 279 aaPredicted RBP14.55□□□□□ -0.08
BRF1-210ENST00000547374 SOGA3Q5TF21 947 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 CCDC70Q6NSX1 233 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 IFT81Q8WYA0 676 aa14.55□□□□□ -0.08
BRF1-210ENST00000547374 KRT86O43790 486 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 SEC23AQ15436 765 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 SND1Q7KZF4 910 aaKnown RBP eCLIP14.54□□□□□ -0.08
BRF1-210ENST00000547374 AMOTL1Q8IY63 956 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 LACRTQ9GZZ8 138 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 CDHR2Q9BYE9 1310 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 MARF1Q9Y4F3 1742 aaKnown RBP14.54□□□□□ -0.08
BRF1-210ENST00000547374 LOC102724428A0A0B4J2F2 783 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 SIK1P57059 783 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 IL17AQ16552 155 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 NAA15Q9BXJ9 866 aaKnown RBP14.54□□□□□ -0.08
BRF1-210ENST00000547374 GBP3Q9H0R5 595 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 RMND1Q9NWS8 449 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 LRWD1Q9UFC0 647 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 FAM205AQ6ZU69 1335 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 CHD2O14647 1828 aaKnown RBP14.54□□□□□ -0.08
BRF1-210ENST00000547374 MYO1CO00159 1063 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 RNF40O75150 1001 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 IL6STP40189 918 aaPredicted RBP14.54□□□□□ -0.08
BRF1-210ENST00000547374 CACNB1Q02641 598 aaPredicted RBP14.54□□□□□ -0.08
BRF1-210ENST00000547374 KCTD16Q68DU8 428 aa14.54□□□□□ -0.08
BRF1-210ENST00000547374 NBPF5PQ86XG9 351 aaPredicted RBP14.54□□□□□ -0.08
BRF1-210ENST00000547374 RBM28Q9NW13 759 aaKnown RBP14.54□□□□□ -0.08
BRF1-210ENST00000547374 ZNF335Q9H4Z2 1342 aaPredicted RBP14.54□□□□□ -0.08
BRF1-210ENST00000547374 MRC1P22897 1456 aa14.53□□□□□ -0.08
BRF1-210ENST00000547374 HIBADHP31937 336 aaKnown RBP14.53□□□□□ -0.08
BRF1-210ENST00000547374 USP17L2Q6R6M4 530 aa14.53□□□□□ -0.08
BRF1-210ENST00000547374 MLXIPQ9HAP2 919 aa14.53□□□□□ -0.08
BRF1-210ENST00000547374 ZEB2O60315 1214 aa14.53□□□□□ -0.08
BRF1-210ENST00000547374 BMP15O95972 392 aa14.53□□□□□ -0.08
BRF1-210ENST00000547374 CYLC1P35663 651 aaPredicted RBP14.53□□□□□ -0.08
BRF1-210ENST00000547374 PICALMQ13492 652 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms