RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 SLC1A4P43007 532 aa12.66□□□□□ -0.38
LINC00661-202ENST00000547102 ZNF589Q86UQ0 364 aaPredicted RBP12.66□□□□□ -0.38
LINC00661-202ENST00000547102 REPS2Q8NFH8 660 aa12.66□□□□□ -0.38
LINC00661-202ENST00000547102 DDX20Q9UHI6 824 aaKnown RBP12.66□□□□□ -0.38
LINC00661-202ENST00000547102 ZNF214Q9UL59 606 aaPredicted RBP12.66□□□□□ -0.38
LINC00661-202ENST00000547102 SLC34A2O95436 690 aa12.65□□□□□ -0.38
LINC00661-202ENST00000547102 FDX1P10109 184 aa12.65□□□□□ -0.38
LINC00661-202ENST00000547102 SLC4A3P48751 1232 aa12.65□□□□□ -0.38
LINC00661-202ENST00000547102 STAT2P52630 851 aa12.65□□□□□ -0.38
LINC00661-202ENST00000547102 IRX6P78412 446 aaPredicted RBP12.65□□□□□ -0.38
LINC00661-202ENST00000547102 HABP4Q5JVS0 413 aaKnown RBP12.65□□□□□ -0.38
LINC00661-202ENST00000547102 CWC27Q6UX04 472 aaKnown RBP12.65□□□□□ -0.38
LINC00661-202ENST00000547102 FAM160B2Q86V87 743 aa12.65□□□□□ -0.38
LINC00661-202ENST00000547102 CPXCR1Q8N123 301 aa12.65□□□□□ -0.38
LINC00661-202ENST00000547102 CHURC1Q8WUH1 139 aa12.65□□□□□ -0.38
LINC00661-202ENST00000547102 GMCL1Q96IK5 515 aa12.65□□□□□ -0.38
LINC00661-202ENST00000547102 RNF41Q9H4P4 317 aaPredicted RBP12.65□□□□□ -0.38
LINC00661-202ENST00000547102 ZNFX1Q9P2E3 1918 aaKnown RBP12.64□□□□□ -0.39
LINC00661-202ENST00000547102 PLXNA1Q9UIW2 1896 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 TMEM232C9JQI7 657 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 ATP2A1O14983 1001 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 PGK2P07205 417 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 PCP11498 1178 aaKnown RBP12.64□□□□□ -0.39
LINC00661-202ENST00000547102 CYBAP13498 195 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 OAZ1P54368 228 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 HAND2P61296 217 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 LHX8Q68G74 356 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 MFSD6Q6ZSS7 791 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 C7orf61Q8IZ16 206 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 DDX11Q96FC9 970 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 MAML3Q96JK9 1138 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 SLC38A10Q9HBR0 1119 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 INCENPQ9NQS7 918 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 FBXO40Q9UH90 709 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 MTMR7Q9Y216 660 aa12.64□□□□□ -0.39
LINC00661-202ENST00000547102 ALPK3Q96L96 1907 aa12.63□□□□□ -0.39
LINC00661-202ENST00000547102 SEPT4O43236 478 aa12.63□□□□□ -0.39
LINC00661-202ENST00000547102 NMT2O60551 498 aa12.63□□□□□ -0.39
LINC00661-202ENST00000547102 FGRP09769 529 aa12.63□□□□□ -0.39
LINC00661-202ENST00000547102 MCCP23508 829 aa12.63□□□□□ -0.39
LINC00661-202ENST00000547102 CCDC96Q2M329 555 aa12.63□□□□□ -0.39
LINC00661-202ENST00000547102 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
LINC00661-202ENST00000547102 STAG1Q8WVM7 1258 aa12.63□□□□□ -0.39
LINC00661-202ENST00000547102 CHMP4CQ96CF2 233 aa12.63□□□□□ -0.39
LINC00661-202ENST00000547102 RAVER2Q9HCJ3 691 aaKnown RBP12.63□□□□□ -0.39
LINC00661-202ENST00000547102 IL17RBQ9NRM6 502 aa12.63□□□□□ -0.39
LINC00661-202ENST00000547102 NRBP1Q9UHY1 535 aa12.63□□□□□ -0.39
LINC00661-202ENST00000547102 COLQQ9Y215 455 aaPredicted RBP12.63□□□□□ -0.39
LINC00661-202ENST00000547102 DIS3Q9Y2L1 958 aaKnown RBP12.63□□□□□ -0.39
LINC00661-202ENST00000547102 LAMA4Q16363 1823 aa12.62□□□□□ -0.39
LINC00661-202ENST00000547102 IGHA2P01877 340 aa12.62□□□□□ -0.39
LINC00661-202ENST00000547102 TOP1P11387 765 aaKnown RBP12.62□□□□□ -0.39
LINC00661-202ENST00000547102 MNX1P50219 401 aaPredicted RBP12.62□□□□□ -0.39
LINC00661-202ENST00000547102 AKNAD1Q5T1N1 836 aa12.62□□□□□ -0.39
LINC00661-202ENST00000547102 KCTD1Q719H9 257 aa12.62□□□□□ -0.39
LINC00661-202ENST00000547102 ANKRD35Q8N283 1001 aa12.62□□□□□ -0.39
LINC00661-202ENST00000547102 ARRDC4Q8NCT1 418 aa12.62□□□□□ -0.39
LINC00661-202ENST00000547102 TRPV1Q8NER1 839 aa12.62□□□□□ -0.39
LINC00661-202ENST00000547102 CHST13Q8NET6 341 aa12.62□□□□□ -0.39
LINC00661-202ENST00000547102 DCAF4Q8WV16 495 aa12.62□□□□□ -0.39
LINC00661-202ENST00000547102 ESR2Q92731 530 aa12.62□□□□□ -0.39
LINC00661-202ENST00000547102 TINF2Q9BSI4 451 aa12.62□□□□□ -0.39
LINC00661-202ENST00000547102 CNPY2Q9Y2B0 182 aa12.62□□□□□ -0.39
LINC00661-202ENST00000547102 PFASO15067 1338 aa12.62□□□□□ -0.39
LINC00661-202ENST00000547102 KBTBD13C9JR72 458 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 DNM1LO00429 736 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 ZNF213O14771 459 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 PLA2G6O60733 806 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
LINC00661-202ENST00000547102 COL6A1P12109 1028 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 NT5C2P49902 561 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 ZNF792Q3KQV3 632 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 TTC22Q5TAA0 569 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 RCSD1Q6JBY9 416 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 TBC1D10CQ8IV04 446 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 MSL3Q8N5Y2 521 aaKnown RBP12.61□□□□□ -0.39
LINC00661-202ENST00000547102 HOMER2Q9NSB8 354 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 TCP11L1Q9NUJ3 509 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 CTNNA3Q9UI47 895 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 RIPK3Q9Y572 518 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 TACC3Q9Y6A5 838 aa12.61□□□□□ -0.39
LINC00661-202ENST00000547102 RARBP10826 455 aa12.6□□□□□ -0.39
LINC00661-202ENST00000547102 IMMTQ16891 758 aaKnown RBP12.6□□□□□ -0.39
LINC00661-202ENST00000547102 TKFCQ3LXA3 575 aa12.6□□□□□ -0.39
LINC00661-202ENST00000547102 PRAMEF19Q5SWL8 479 aa12.6□□□□□ -0.39
LINC00661-202ENST00000547102 ANO1Q5XXA6 986 aa12.6□□□□□ -0.39
LINC00661-202ENST00000547102 CCDC174Q6PII3 467 aa12.6□□□□□ -0.39
LINC00661-202ENST00000547102 IQCA1Q86XH1 822 aa12.6□□□□□ -0.39
LINC00661-202ENST00000547102 DSCC1Q9BVC3 393 aa12.6□□□□□ -0.39
LINC00661-202ENST00000547102 ACAD9Q9H845 621 aa12.6□□□□□ -0.39
LINC00661-202ENST00000547102 NEDD4P46934 1319 aa12.6□□□□□ -0.39
LINC00661-202ENST00000547102 RAD50Q92878 1312 aa12.6□□□□□ -0.39
LINC00661-202ENST00000547102 SYNGAP1Q96PV0 1343 aa12.6□□□□□ -0.39
LINC00661-202ENST00000547102 TRIOBPQ9H2D6 2365 aa12.59□□□□□ -0.39
LINC00661-202ENST00000547102 AKR1A1P14550 325 aa12.59□□□□□ -0.39
LINC00661-202ENST00000547102 PDE4AP27815 886 aa12.59□□□□□ -0.39
LINC00661-202ENST00000547102 NOVP48745 357 aa12.59□□□□□ -0.39
LINC00661-202ENST00000547102 CCDC178Q5BJE1 867 aa12.59□□□□□ -0.39
LINC00661-202ENST00000547102 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC00661-202ENST00000547102 RUFY2Q8WXA3 655 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms