RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 TPM2P07951 284 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 PCP11498 1178 aaKnown RBP14.42□□□□□ -0.1
SCAF11-209ENST00000547018 ALDH1B1P30837 517 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 CCDC178Q5BJE1 867 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 IQUBQ8NA54 791 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 TIGD1Q96MW7 591 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 DESI2Q9BSY9 194 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 PCDHA6Q9UN73 950 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 PCDHA8Q9Y5H6 950 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 FGRP09769 529 aa14.41□□□□□ -0.1
SCAF11-209ENST00000547018 RXRBP28702 533 aa14.41□□□□□ -0.1
SCAF11-209ENST00000547018 PDE6BP35913 854 aa14.41□□□□□ -0.1
SCAF11-209ENST00000547018 CRKP46108 304 aa14.41□□□□□ -0.1
SCAF11-209ENST00000547018 TBCKQ8TEA7 893 aa14.41□□□□□ -0.1
SCAF11-209ENST00000547018 TRIM49BA6NDI0 452 aa14.41□□□□□ -0.1
SCAF11-209ENST00000547018 PPIP5K2O43314 1243 aa14.41□□□□□ -0.1
SCAF11-209ENST00000547018 GNAQP50148 359 aa14.41□□□□□ -0.1
SCAF11-209ENST00000547018 DYMQ7RTS9 669 aa14.41□□□□□ -0.1
SCAF11-209ENST00000547018 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.41□□□□□ -0.1
SCAF11-209ENST00000547018 CCDC84Q86UT8 332 aaPredicted RBP14.41□□□□□ -0.1
SCAF11-209ENST00000547018 COA1Q9GZY4 146 aa14.41□□□□□ -0.1
SCAF11-209ENST00000547018 ZHX3Q9H4I2 956 aa14.41□□□□□ -0.1
SCAF11-209ENST00000547018 C4BP0C0L5 1744 aa14.41□□□□□ -0.1
SCAF11-209ENST00000547018 SLFN14P0C7P3 912 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 IDEP14735 1019 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 C16orf86Q6ZW13 317 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 HSD3B7Q9H2F3 369 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 COL5A3P25940 1745 aaPredicted RBP14.4□□□□□ -0.1
SCAF11-209ENST00000547018 DDTLA6NHG4 134 aaPredicted RBP14.4□□□□□ -0.1
SCAF11-209ENST00000547018 USP17L10C9JJH3 530 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 NRDCO43847 1150 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 HLA-DOAP06340 250 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 MDM2Q00987 491 aaPredicted RBP14.4□□□□□ -0.1
SCAF11-209ENST00000547018 CEP135Q66GS9 1140 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 SARM1Q6SZW1 724 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 SYT10Q6XYQ8 523 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 NEDD1Q8NHV4 660 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 MASTLQ96GX5 879 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 USP17L15C9J2P7 530 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 USP17L13C9JLJ4 530 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 USP17L11C9JVI0 530 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 USP17L18D6R9N7 530 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 USP17L22D6RA61 530 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 USP17L17D6RBQ6 530 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 USP17L19D6RCP7 530 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 USP17L20D6RJB6 530 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 ECE2O60344 883 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 USP17L24Q0WX57 530 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 USP17L6PQ6QN14 398 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 TAB2Q9NYJ8 693 aa14.4□□□□□ -0.1
SCAF11-209ENST00000547018 STXBP3O00186 592 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 HOXA10P31260 410 aaPredicted RBP14.39□□□□□ -0.11
SCAF11-209ENST00000547018 CCZ1BP86790 482 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 CCZ1P86791 482 aaPredicted RBP14.39□□□□□ -0.11
SCAF11-209ENST00000547018 ATP2C1P98194 919 aaPredicted RBP14.39□□□□□ -0.11
SCAF11-209ENST00000547018 SEPT2Q15019 361 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 MIGA2Q7L4E1 593 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 FERMT2Q96AC1 680 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 MED15Q96RN5 788 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 MTA3Q9BTC8 594 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 C6orf50Q9HD87 102 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 DUOX1Q9NRD9 1551 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 TDP2O95551 362 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 DPYDQ12882 1025 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 CCAR2Q8N163 923 aaKnown RBP14.39□□□□□ -0.11
SCAF11-209ENST00000547018 REXO1Q8N1G1 1221 aaKnown RBP14.39□□□□□ -0.11
SCAF11-209ENST00000547018 CCDC112Q8NEF3 446 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 CCDC148Q8NFR7 591 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 BARHL2Q9NY43 387 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 MTMR4Q9NYA4 1195 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 PDHBP11177 359 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 SLC30A10Q6XR72 485 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 POTEDQ86YR6 584 aa14.39□□□□□ -0.11
SCAF11-209ENST00000547018 ZNF277Q9NRM2 450 aaPredicted RBP14.39□□□□□ -0.11
SCAF11-209ENST00000547018 SYNRGQ9UMZ2 1314 aa14.38□□□□□ -0.11
SCAF11-209ENST00000547018 PALM3A6NDB9 673 aaPredicted RBP14.38□□□□□ -0.11
SCAF11-209ENST00000547018 POTEMA6NI47 508 aa14.38□□□□□ -0.11
SCAF11-209ENST00000547018 TNFRSF25Q93038 417 aa14.38□□□□□ -0.11
SCAF11-209ENST00000547018 PCMTD1Q96MG8 357 aaPredicted RBP14.38□□□□□ -0.11
SCAF11-209ENST00000547018 LAMB2P55268 1798 aa14.38□□□□□ -0.11
SCAF11-209ENST00000547018 N4BP3O15049 544 aa14.38□□□□□ -0.11
SCAF11-209ENST00000547018 SLC1A4P43007 532 aa14.38□□□□□ -0.11
SCAF11-209ENST00000547018 NONOQ15233 471 aaKnown RBP eCLIP14.38□□□□□ -0.11
SCAF11-209ENST00000547018 APOBEC3HQ6NTF7 200 aaKnown RBP14.38□□□□□ -0.11
SCAF11-209ENST00000547018 CDK5RAP3Q96JB5 506 aa14.38□□□□□ -0.11
SCAF11-209ENST00000547018 TCP11L1Q9NUJ3 509 aa14.38□□□□□ -0.11
SCAF11-209ENST00000547018 TBC1D7Q9P0N9 293 aa14.38□□□□□ -0.11
SCAF11-209ENST00000547018 RCAN1P53805 252 aa14.37□□□□□ -0.11
SCAF11-209ENST00000547018 ASIC1P78348 528 aa14.37□□□□□ -0.11
SCAF11-209ENST00000547018 CACNB1Q02641 598 aaPredicted RBP14.37□□□□□ -0.11
SCAF11-209ENST00000547018 KANK3Q6NY19 840 aa14.37□□□□□ -0.11
SCAF11-209ENST00000547018 MLKLQ8NB16 471 aa14.37□□□□□ -0.11
SCAF11-209ENST00000547018 MTRQ99707 1265 aa14.37□□□□□ -0.11
SCAF11-209ENST00000547018 DOCK2Q92608 1830 aa14.37□□□□□ -0.11
SCAF11-209ENST00000547018 FAM170AA1A519 330 aa14.37□□□□□ -0.11
SCAF11-209ENST00000547018 MORC3Q14149 939 aa14.37□□□□□ -0.11
SCAF11-209ENST00000547018 SPTLC3Q9NUV7 552 aa14.37□□□□□ -0.11
SCAF11-209ENST00000547018 DNAI1Q9UI46 699 aa14.37□□□□□ -0.11
SCAF11-209ENST00000547018 NEMFO60524 1076 aa14.37□□□□□ -0.11
SCAF11-209ENST00000547018 MTF1Q14872 753 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms