RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 PTCH2Q9Y6C5 1203 aa29.79■■■□□ 2.36
NKX2-1-205ENST00000546983 XRCC5P13010 732 aaKnown RBP29.78■■■□□ 2.36
NKX2-1-205ENST00000546983 ZNF543Q08ER8 600 aa29.78■■■□□ 2.36
NKX2-1-205ENST00000546983 WTAPQ15007 396 aa29.78■■■□□ 2.36
NKX2-1-205ENST00000546983 MB21D2Q8IYB1 491 aaPredicted RBP29.78■■■□□ 2.36
NKX2-1-205ENST00000546983 ARMC5Q96C12 935 aa29.78■■■□□ 2.36
NKX2-1-205ENST00000546983 FBXO40Q9UH90 709 aa29.78■■■□□ 2.36
NKX2-1-205ENST00000546983 WDR19Q8NEZ3 1342 aa29.77■■■□□ 2.36
NKX2-1-205ENST00000546983 GRK4P32298 578 aa29.77■■■□□ 2.36
NKX2-1-205ENST00000546983 RGS2P41220 211 aa29.77■■■□□ 2.36
NKX2-1-205ENST00000546983 TMEM132BQ14DG7 1078 aa29.77■■■□□ 2.36
NKX2-1-205ENST00000546983 SEC23AQ15436 765 aa29.77■■■□□ 2.36
NKX2-1-205ENST00000546983 WDR78Q5VTH9 848 aa29.77■■■□□ 2.36
NKX2-1-205ENST00000546983 POTEEQ6S8J3 1075 aa29.77■■■□□ 2.36
NKX2-1-205ENST00000546983 CYB5R4Q7L1T6 521 aa29.77■■■□□ 2.36
NKX2-1-205ENST00000546983 PORCNQ9H237 461 aa29.77■■■□□ 2.36
NKX2-1-205ENST00000546983 TKFCQ3LXA3 575 aa29.76■■■□□ 2.35
NKX2-1-205ENST00000546983 STOX1Q6ZVD7 989 aa29.76■■■□□ 2.35
NKX2-1-205ENST00000546983 KCTD1Q719H9 257 aa29.76■■■□□ 2.35
NKX2-1-205ENST00000546983 NEK1Q96PY6 1258 aa29.76■■■□□ 2.35
NKX2-1-205ENST00000546983 ZNF214Q9UL59 606 aaPredicted RBP29.76■■■□□ 2.35
NKX2-1-205ENST00000546983 A0A0G2JMZ2 1700 aa29.75■■■□□ 2.35
NKX2-1-205ENST00000546983 ERCC3P19447 782 aa29.75■■■□□ 2.35
NKX2-1-205ENST00000546983 PTPREP23469 700 aa29.75■■■□□ 2.35
NKX2-1-205ENST00000546983 HSPA4P34932 840 aa29.75■■■□□ 2.35
NKX2-1-205ENST00000546983 UBXN2AP68543 259 aa29.75■■■□□ 2.35
NKX2-1-205ENST00000546983 CAP1Q01518 475 aa29.75■■■□□ 2.35
NKX2-1-205ENST00000546983 TMEM67Q5HYA8 995 aa29.75■■■□□ 2.35
NKX2-1-205ENST00000546983 NCAPG2Q86XI2 1143 aa29.75■■■□□ 2.35
NKX2-1-205ENST00000546983 REPS2Q8NFH8 660 aa29.75■■■□□ 2.35
NKX2-1-205ENST00000546983 GJD2Q9UKL4 321 aa29.75■■■□□ 2.35
NKX2-1-205ENST00000546983 MTMR7Q9Y216 660 aa29.75■■■□□ 2.35
NKX2-1-205ENST00000546983 ADCY3O60266 1144 aa29.74■■■□□ 2.35
NKX2-1-205ENST00000546983 PARP1P09874 1014 aaKnown RBP29.74■■■□□ 2.35
NKX2-1-205ENST00000546983 FCER1AP12319 257 aa29.74■■■□□ 2.35
NKX2-1-205ENST00000546983 CAPN2P17655 700 aa29.74■■■□□ 2.35
NKX2-1-205ENST00000546983 PSMA5P28066 241 aa29.74■■■□□ 2.35
NKX2-1-205ENST00000546983 MORN1Q5T089 497 aa29.74■■■□□ 2.35
NKX2-1-205ENST00000546983 CATIPQ7Z7H3 387 aa29.74■■■□□ 2.35
NKX2-1-205ENST00000546983 KCNB2Q92953 911 aa29.74■■■□□ 2.35
NKX2-1-205ENST00000546983 PRC1O43663 620 aa29.73■■■□□ 2.35
NKX2-1-205ENST00000546983 LIFRP42702 1097 aa29.73■■■□□ 2.35
NKX2-1-205ENST00000546983 MAP2K5Q13163 448 aa29.73■■■□□ 2.35
NKX2-1-205ENST00000546983 SYDE2Q5VT97 1194 aa29.73■■■□□ 2.35
NKX2-1-205ENST00000546983 SNRNP48Q6IEG0 339 aaKnown RBP29.73■■■□□ 2.35
NKX2-1-205ENST00000546983 CHST13Q8NET6 341 aa29.73■■■□□ 2.35
NKX2-1-205ENST00000546983 MAP3K14Q99558 947 aa29.73■■■□□ 2.35
NKX2-1-205ENST00000546983 APBA2Q99767 749 aa29.73■■■□□ 2.35
NKX2-1-205ENST00000546983 PRR12Q9ULL5 1215 aa29.73■■■□□ 2.35
NKX2-1-205ENST00000546983 RLFQ13129 1914 aa29.73■■■□□ 2.35
NKX2-1-205ENST00000546983 ECM2O94769 699 aaPredicted RBP29.72■■■□□ 2.35
NKX2-1-205ENST00000546983 GRB14Q14449 540 aa29.72■■■□□ 2.35
NKX2-1-205ENST00000546983 KCTD2Q14681 263 aa29.72■■■□□ 2.35
NKX2-1-205ENST00000546983 IGDCC4Q8TDY8 1250 aa29.72■■■□□ 2.35
NKX2-1-205ENST00000546983 GABRQQ9UN88 632 aa29.72■■■□□ 2.35
NKX2-1-205ENST00000546983 MGAMO43451 1857 aa29.72■■■□□ 2.35
NKX2-1-205ENST00000546983 HOXC6P09630 235 aa29.71■■■□□ 2.35
NKX2-1-205ENST00000546983 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.71■■■□□ 2.35
NKX2-1-205ENST00000546983 DHX32Q7L7V1 743 aaKnown RBP29.71■■■□□ 2.35
NKX2-1-205ENST00000546983 BIN2Q9UBW5 565 aaPredicted RBP29.71■■■□□ 2.35
NKX2-1-205ENST00000546983 CALM1P0DP23 149 aa29.7■■■□□ 2.35
NKX2-1-205ENST00000546983 CALM2P0DP24 149 aa29.7■■■□□ 2.35
NKX2-1-205ENST00000546983 CALM3P0DP25 149 aa29.7■■■□□ 2.35
NKX2-1-205ENST00000546983 TRAF1Q13077 416 aa29.7■■■□□ 2.35
NKX2-1-205ENST00000546983 CPXCR1Q8N123 301 aa29.7■■■□□ 2.35
NKX2-1-205ENST00000546983 NKX2-3Q8TAU0 364 aa29.7■■■□□ 2.35
NKX2-1-205ENST00000546983 USP6NLQ92738 828 aa29.7■■■□□ 2.35
NKX2-1-205ENST00000546983 MAF1Q9H063 256 aa29.7■■■□□ 2.35
NKX2-1-205ENST00000546983 GPCPD1Q9NPB8 672 aa29.7■■■□□ 2.35
NKX2-1-205ENST00000546983 TAF6LQ9Y6J9 622 aa29.7■■■□□ 2.35
NKX2-1-205ENST00000546983 CCDC69A6NI79 296 aa29.69■■■□□ 2.34
NKX2-1-205ENST00000546983 DDAH1O94760 285 aa29.69■■■□□ 2.34
NKX2-1-205ENST00000546983 HMGCRP04035 888 aa29.69■■■□□ 2.34
NKX2-1-205ENST00000546983 KIF5BP33176 963 aa29.69■■■□□ 2.34
NKX2-1-205ENST00000546983 DPP9Q86TI2 863 aa29.69■■■□□ 2.34
NKX2-1-205ENST00000546983 ZNF333Q96JL9 665 aa29.69■■■□□ 2.34
NKX2-1-205ENST00000546983 TMEM106CQ9BVX2 250 aa29.69■■■□□ 2.34
NKX2-1-205ENST00000546983 RANBP17Q9H2T7 1088 aaKnown RBP29.69■■■□□ 2.34
NKX2-1-205ENST00000546983 FRMPD2Q68DX3 1309 aaPredicted RBP29.69■■■□□ 2.34
NKX2-1-205ENST00000546983 CCDC85CA6NKD9 419 aa29.68■■■□□ 2.34
NKX2-1-205ENST00000546983 PEX10O60683 326 aa29.68■■■□□ 2.34
NKX2-1-205ENST00000546983 ICAM1P05362 532 aa29.68■■■□□ 2.34
NKX2-1-205ENST00000546983 ANTXR2P58335 489 aa29.68■■■□□ 2.34
NKX2-1-205ENST00000546983 SYNE3Q6ZMZ3 975 aa29.68■■■□□ 2.34
NKX2-1-205ENST00000546983 NFXL1Q6ZNB6 911 aa29.68■■■□□ 2.34
NKX2-1-205ENST00000546983 USP26Q9BXU7 913 aa29.68■■■□□ 2.34
NKX2-1-205ENST00000546983 RAVER2Q9HCJ3 691 aaKnown RBP29.68■■■□□ 2.34
NKX2-1-205ENST00000546983 PARP14Q460N5 1801 aa29.68■■■□□ 2.34
NKX2-1-205ENST00000546983 GNAQP50148 359 aa29.67■■■□□ 2.34
NKX2-1-205ENST00000546983 MMP19Q99542 508 aa29.67■■■□□ 2.34
NKX2-1-205ENST00000546983 LY9Q9HBG7 655 aa29.67■■■□□ 2.34
NKX2-1-205ENST00000546983 DIS3Q9Y2L1 958 aaKnown RBP29.67■■■□□ 2.34
NKX2-1-205ENST00000546983 ADORA2AP29274 412 aa29.66■■■□□ 2.34
NKX2-1-205ENST00000546983 IFFO2Q5TF58 517 aa29.66■■■□□ 2.34
NKX2-1-205ENST00000546983 CTCFLQ8NI51 663 aaPredicted RBP29.66■■■□□ 2.34
NKX2-1-205ENST00000546983 LZTS2Q9BRK4 669 aa29.66■■■□□ 2.34
NKX2-1-205ENST00000546983 ACAD9Q9H845 621 aa29.66■■■□□ 2.34
NKX2-1-205ENST00000546983 SH2B2O14492 632 aaPredicted RBP29.65■■■□□ 2.34
NKX2-1-205ENST00000546983 CYP2B6P20813 491 aa29.65■■■□□ 2.34
NKX2-1-205ENST00000546983 TTBK2Q6IQ55 1244 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms