RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 DPP9Q86TI2 863 aa17.44■□□□□ 0.38
CCDC38-205ENST00000546947 FAM160B2Q86V87 743 aa17.44■□□□□ 0.38
CCDC38-205ENST00000546947 IL25Q9H293 177 aa17.44■□□□□ 0.38
CCDC38-205ENST00000546947 CTDP1Q9Y5B0 961 aaPredicted RBP17.44■□□□□ 0.38
CCDC38-205ENST00000546947 PLXNA1Q9UIW2 1896 aa17.44■□□□□ 0.38
CCDC38-205ENST00000546947 ATP2A1O14983 1001 aa17.43■□□□□ 0.38
CCDC38-205ENST00000546947 PLA2G6O60733 806 aa17.43■□□□□ 0.38
CCDC38-205ENST00000546947 ZBED4O75132 1171 aa17.43■□□□□ 0.38
CCDC38-205ENST00000546947 PRKAR2AP13861 404 aaKnown RBP17.43■□□□□ 0.38
CCDC38-205ENST00000546947 STAT2P52630 851 aa17.43■□□□□ 0.38
CCDC38-205ENST00000546947 CACNB2Q08289 660 aaPredicted RBP17.43■□□□□ 0.38
CCDC38-205ENST00000546947 NPLOC4Q8TAT6 608 aa17.43■□□□□ 0.38
CCDC38-205ENST00000546947 CHURC1Q8WUH1 139 aa17.43■□□□□ 0.38
CCDC38-205ENST00000546947 ESR2Q92731 530 aa17.43■□□□□ 0.38
CCDC38-205ENST00000546947 KIFC2Q96AC6 838 aa17.43■□□□□ 0.38
CCDC38-205ENST00000546947 TTC14Q96N46 770 aa17.43■□□□□ 0.38
CCDC38-205ENST00000546947 DEFB118Q96PH6 123 aa17.43■□□□□ 0.38
CCDC38-205ENST00000546947 TEX13BQ9BXU2 312 aa17.43■□□□□ 0.38
CCDC38-205ENST00000546947 SLC5A4Q9NY91 659 aa17.43■□□□□ 0.38
CCDC38-205ENST00000546947 NEDD4P46934 1319 aa17.43■□□□□ 0.38
CCDC38-205ENST00000546947 TMEM232C9JQI7 657 aa17.42■□□□□ 0.38
CCDC38-205ENST00000546947 TFRCP02786 760 aaKnown RBP17.42■□□□□ 0.38
CCDC38-205ENST00000546947 TOP1P11387 765 aaKnown RBP17.42■□□□□ 0.38
CCDC38-205ENST00000546947 FCER1AP12319 257 aa17.42■□□□□ 0.38
CCDC38-205ENST00000546947 MCCP23508 829 aa17.42■□□□□ 0.38
CCDC38-205ENST00000546947 OAZ1P54368 228 aa17.42■□□□□ 0.38
CCDC38-205ENST00000546947 MFSD14CQ5VZR4 134 aa17.42■□□□□ 0.38
CCDC38-205ENST00000546947 RCSD1Q6JBY9 416 aa17.42■□□□□ 0.38
CCDC38-205ENST00000546947 DCAF4Q8WV16 495 aa17.42■□□□□ 0.38
CCDC38-205ENST00000546947 CRISPLD2Q9H0B8 497 aa17.42■□□□□ 0.38
CCDC38-205ENST00000546947 SLC38A10Q9HBR0 1119 aa17.42■□□□□ 0.38
CCDC38-205ENST00000546947 ISY1Q9ULR0 285 aaKnown RBP17.42■□□□□ 0.38
CCDC38-205ENST00000546947 CCDC178Q5BJE1 867 aa17.41■□□□□ 0.38
CCDC38-205ENST00000546947 OLFML2BQ68BL8 750 aa17.41■□□□□ 0.38
CCDC38-205ENST00000546947 SNRNP48Q6IEG0 339 aaKnown RBP17.41■□□□□ 0.38
CCDC38-205ENST00000546947 MMP19Q99542 508 aa17.41■□□□□ 0.38
CCDC38-205ENST00000546947 TMEM47Q9BQJ4 181 aa17.41■□□□□ 0.38
CCDC38-205ENST00000546947 FLRT1Q9NZU1 646 aa17.41■□□□□ 0.38
CCDC38-205ENST00000546947 FRMPD3Q5JV73 1810 aa17.41■□□□□ 0.38
CCDC38-205ENST00000546947 SGSM2O43147 1006 aa17.4■□□□□ 0.38
CCDC38-205ENST00000546947 COBLO75128 1261 aa17.4■□□□□ 0.38
CCDC38-205ENST00000546947 IKQ13123 557 aaPredicted RBP17.4■□□□□ 0.38
CCDC38-205ENST00000546947 KCTD2Q14681 263 aa17.4■□□□□ 0.38
CCDC38-205ENST00000546947 UBE2Q1Q7Z7E8 422 aa17.4■□□□□ 0.38
CCDC38-205ENST00000546947 IQCA1Q86XH1 822 aa17.4■□□□□ 0.38
CCDC38-205ENST00000546947 CNNM2Q9H8M5 875 aa17.4■□□□□ 0.38
CCDC38-205ENST00000546947 FARP2O94887 1054 aaPredicted RBP17.39■□□□□ 0.37
CCDC38-205ENST00000546947 IGHA2P01877 340 aa17.39■□□□□ 0.37
CCDC38-205ENST00000546947 KCTD1Q719H9 257 aa17.39■□□□□ 0.37
CCDC38-205ENST00000546947 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.39■□□□□ 0.37
CCDC38-205ENST00000546947 DGKHQ86XP1 1220 aa17.39■□□□□ 0.37
CCDC38-205ENST00000546947 CPXCR1Q8N123 301 aa17.39■□□□□ 0.37
CCDC38-205ENST00000546947 ANKLE1Q8NAG6 615 aa17.39■□□□□ 0.37
CCDC38-205ENST00000546947 KRT23Q9C075 422 aa17.39■□□□□ 0.37
CCDC38-205ENST00000546947 RAVER2Q9HCJ3 691 aaKnown RBP17.39■□□□□ 0.37
CCDC38-205ENST00000546947 DIS3Q9Y2L1 958 aaKnown RBP17.39■□□□□ 0.37
CCDC38-205ENST00000546947 B4E1Z4 1266 aa17.38■□□□□ 0.37
CCDC38-205ENST00000546947 KDM4AO75164 1064 aa17.38■□□□□ 0.37
CCDC38-205ENST00000546947 CCND3P30281 292 aaPredicted RBP17.38■□□□□ 0.37
CCDC38-205ENST00000546947 CCDC96Q2M329 555 aa17.38■□□□□ 0.37
CCDC38-205ENST00000546947 PRPF38BQ5VTL8 546 aaKnown RBP17.38■□□□□ 0.37
CCDC38-205ENST00000546947 MAML3Q96JK9 1138 aa17.38■□□□□ 0.37
CCDC38-205ENST00000546947 FBXO40Q9UH90 709 aa17.38■□□□□ 0.37
CCDC38-205ENST00000546947 MTMR7Q9Y216 660 aa17.38■□□□□ 0.37
CCDC38-205ENST00000546947 RIPK3Q9Y572 518 aa17.38■□□□□ 0.37
CCDC38-205ENST00000546947 U3KPZ7 1027 aaPredicted RBP17.38■□□□□ 0.37
CCDC38-205ENST00000546947 CYP2C19P33261 490 aa17.37■□□□□ 0.37
CCDC38-205ENST00000546947 PTH1RQ03431 593 aa17.37■□□□□ 0.37
CCDC38-205ENST00000546947 BTNL9Q6UXG8 535 aa17.37■□□□□ 0.37
CCDC38-205ENST00000546947 RASGRP2Q7LDG7 609 aa17.37■□□□□ 0.37
CCDC38-205ENST00000546947 CHST13Q8NET6 341 aa17.37■□□□□ 0.37
CCDC38-205ENST00000546947 CHMP4CQ96CF2 233 aa17.37■□□□□ 0.37
CCDC38-205ENST00000546947 CCDC136Q96JN2 1154 aa17.37■□□□□ 0.37
CCDC38-205ENST00000546947 ZKSCAN3Q9BRR0 538 aa17.37■□□□□ 0.37
CCDC38-205ENST00000546947 HTATIP2Q9BUP3 242 aa17.37■□□□□ 0.37
CCDC38-205ENST00000546947 OGDHLQ9ULD0 1010 aa17.37■□□□□ 0.37
CCDC38-205ENST00000546947 PRR12Q9ULL5 1215 aa17.37■□□□□ 0.37
CCDC38-205ENST00000546947 PDE4DIPQ5VU43 2346 aa17.37■□□□□ 0.37
CCDC38-205ENST00000546947 MSCO60682 206 aa17.36■□□□□ 0.37
CCDC38-205ENST00000546947 PDHBP11177 359 aa17.36■□□□□ 0.37
CCDC38-205ENST00000546947 SLC4A3P48751 1232 aa17.36■□□□□ 0.37
CCDC38-205ENST00000546947 ZNF792Q3KQV3 632 aa17.36■□□□□ 0.37
CCDC38-205ENST00000546947 TKFCQ3LXA3 575 aa17.36■□□□□ 0.37
CCDC38-205ENST00000546947 BMP2KLQ5H9B9 411 aa17.36■□□□□ 0.37
CCDC38-205ENST00000546947 ANKS1AQ92625 1134 aa17.36■□□□□ 0.37
CCDC38-205ENST00000546947 ZSWIM5Q9P217 1185 aa17.36■□□□□ 0.37
CCDC38-205ENST00000546947 NEFLP07196 543 aa17.35■□□□□ 0.37
CCDC38-205ENST00000546947 PGK2P07205 417 aa17.35■□□□□ 0.37
CCDC38-205ENST00000546947 CYP21A2P08686 494 aa17.35■□□□□ 0.37
CCDC38-205ENST00000546947 SNHG28P0DPA3 235 aa17.35■□□□□ 0.37
CCDC38-205ENST00000546947 CYBAP13498 195 aa17.35■□□□□ 0.37
CCDC38-205ENST00000546947 TRDNQ13061 729 aa17.35■□□□□ 0.37
CCDC38-205ENST00000546947 LHX8Q68G74 356 aa17.35■□□□□ 0.37
CCDC38-205ENST00000546947 MAP4K1Q92918 833 aa17.35■□□□□ 0.37
CCDC38-205ENST00000546947 DDX11Q96FC9 970 aa17.35■□□□□ 0.37
CCDC38-205ENST00000546947 ZSCAN10Q96SZ4 725 aaPredicted RBP17.35■□□□□ 0.37
CCDC38-205ENST00000546947 ZNF536O15090 1300 aa17.35■□□□□ 0.37
CCDC38-205ENST00000546947 DNAJC25-GNG10A0A024R161 153 aa17.34■□□□□ 0.37
CCDC38-205ENST00000546947 TNKSO95271 1327 aa17.34■□□□□ 0.37
CCDC38-205ENST00000546947 CNGA1P29973 690 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms