RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ZBED4O75132 1171 aa18.74■□□□□ 0.59
DDX54-204ENST00000546898 NEFLP07196 543 aa18.74■□□□□ 0.59
DDX54-204ENST00000546898 TOP1P11387 765 aaKnown RBP18.74■□□□□ 0.59
DDX54-204ENST00000546898 ADORA2AP29274 412 aa18.74■□□□□ 0.59
DDX54-204ENST00000546898 TTC14Q96N46 770 aa18.74■□□□□ 0.59
DDX54-204ENST00000546898 HMX1Q9NP08 348 aaPredicted RBP18.74■□□□□ 0.59
DDX54-204ENST00000546898 SLC5A4Q9NY91 659 aa18.74■□□□□ 0.59
DDX54-204ENST00000546898 CTDP1Q9Y5B0 961 aaPredicted RBP18.74■□□□□ 0.59
DDX54-204ENST00000546898 TMEM232C9JQI7 657 aa18.73■□□□□ 0.59
DDX54-204ENST00000546898 SGPL1O95470 568 aa18.73■□□□□ 0.59
DDX54-204ENST00000546898 OAZ1P54368 228 aa18.73■□□□□ 0.59
DDX54-204ENST00000546898 TRIM32Q13049 653 aa18.73■□□□□ 0.59
DDX54-204ENST00000546898 CCL14Q16627 93 aa18.73■□□□□ 0.59
DDX54-204ENST00000546898 CCDC178Q5BJE1 867 aa18.73■□□□□ 0.59
DDX54-204ENST00000546898 CHURC1Q8WUH1 139 aa18.73■□□□□ 0.59
DDX54-204ENST00000546898 DCAF4Q8WV16 495 aa18.73■□□□□ 0.59
DDX54-204ENST00000546898 KIFC2Q96AC6 838 aa18.73■□□□□ 0.59
DDX54-204ENST00000546898 TMEM47Q9BQJ4 181 aa18.73■□□□□ 0.59
DDX54-204ENST00000546898 CNNM2Q9H8M5 875 aa18.73■□□□□ 0.59
DDX54-204ENST00000546898 SLC38A10Q9HBR0 1119 aa18.73■□□□□ 0.59
DDX54-204ENST00000546898 ISY1Q9ULR0 285 aaKnown RBP18.73■□□□□ 0.59
DDX54-204ENST00000546898 FCER1AP12319 257 aa18.72■□□□□ 0.59
DDX54-204ENST00000546898 PRKAR2AP13861 404 aaKnown RBP18.72■□□□□ 0.59
DDX54-204ENST00000546898 MCCP23508 829 aa18.72■□□□□ 0.59
DDX54-204ENST00000546898 BMP2KLQ5H9B9 411 aa18.72■□□□□ 0.59
DDX54-204ENST00000546898 SNRNP48Q6IEG0 339 aaKnown RBP18.72■□□□□ 0.59
DDX54-204ENST00000546898 RCSD1Q6JBY9 416 aa18.72■□□□□ 0.59
DDX54-204ENST00000546898 DPP9Q86TI2 863 aa18.72■□□□□ 0.59
DDX54-204ENST00000546898 IQCA1Q86XH1 822 aa18.72■□□□□ 0.59
DDX54-204ENST00000546898 CCDC136Q96JN2 1154 aa18.72■□□□□ 0.59
DDX54-204ENST00000546898 KRT23Q9C075 422 aa18.72■□□□□ 0.59
DDX54-204ENST00000546898 KDM4AO75164 1064 aa18.71■□□□□ 0.59
DDX54-204ENST00000546898 IKQ13123 557 aaPredicted RBP18.71■□□□□ 0.59
DDX54-204ENST00000546898 KCTD2Q14681 263 aa18.71■□□□□ 0.59
DDX54-204ENST00000546898 MFSD14CQ5VZR4 134 aa18.71■□□□□ 0.59
DDX54-204ENST00000546898 OLFML2BQ68BL8 750 aa18.71■□□□□ 0.59
DDX54-204ENST00000546898 DGKHQ86XP1 1220 aa18.71■□□□□ 0.59
DDX54-204ENST00000546898 NPLOC4Q8TAT6 608 aa18.71■□□□□ 0.59
DDX54-204ENST00000546898 DEFB118Q96PH6 123 aa18.71■□□□□ 0.59
DDX54-204ENST00000546898 MMP19Q99542 508 aa18.71■□□□□ 0.59
DDX54-204ENST00000546898 U3KPZ7 1027 aaPredicted RBP18.71■□□□□ 0.59
DDX54-204ENST00000546898 CACNB2Q08289 660 aaPredicted RBP18.7■□□□□ 0.58
DDX54-204ENST00000546898 CCDC96Q2M329 555 aa18.7■□□□□ 0.58
DDX54-204ENST00000546898 KCTD1Q719H9 257 aa18.7■□□□□ 0.58
DDX54-204ENST00000546898 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.7■□□□□ 0.58
DDX54-204ENST00000546898 CRISPLD2Q9H0B8 497 aa18.7■□□□□ 0.58
DDX54-204ENST00000546898 FLRT1Q9NZU1 646 aa18.7■□□□□ 0.58
DDX54-204ENST00000546898 B4E1Z4 1266 aa18.69■□□□□ 0.58
DDX54-204ENST00000546898 IGHA2P01877 340 aa18.69■□□□□ 0.58
DDX54-204ENST00000546898 PTH1RQ03431 593 aa18.69■□□□□ 0.58
DDX54-204ENST00000546898 CPXCR1Q8N123 301 aa18.69■□□□□ 0.58
DDX54-204ENST00000546898 FBXO40Q9UH90 709 aa18.69■□□□□ 0.58
DDX54-204ENST00000546898 COBLO75128 1261 aa18.68■□□□□ 0.58
DDX54-204ENST00000546898 BTNL9Q6UXG8 535 aa18.68■□□□□ 0.58
DDX54-204ENST00000546898 RASGRP2Q7LDG7 609 aa18.68■□□□□ 0.58
DDX54-204ENST00000546898 ANKLE1Q8NAG6 615 aa18.68■□□□□ 0.58
DDX54-204ENST00000546898 CHST13Q8NET6 341 aa18.68■□□□□ 0.58
DDX54-204ENST00000546898 ANKS1AQ92625 1134 aa18.68■□□□□ 0.58
DDX54-204ENST00000546898 RAVER2Q9HCJ3 691 aaKnown RBP18.68■□□□□ 0.58
DDX54-204ENST00000546898 MTMR7Q9Y216 660 aa18.68■□□□□ 0.58
DDX54-204ENST00000546898 DIS3Q9Y2L1 958 aaKnown RBP18.68■□□□□ 0.58
DDX54-204ENST00000546898 FARP2O94887 1054 aaPredicted RBP18.67■□□□□ 0.58
DDX54-204ENST00000546898 TFRCP02786 760 aaKnown RBP18.67■□□□□ 0.58
DDX54-204ENST00000546898 CYP21A2P08686 494 aa18.67■□□□□ 0.58
DDX54-204ENST00000546898 SNHG28P0DPA3 235 aa18.67■□□□□ 0.58
DDX54-204ENST00000546898 PDHBP11177 359 aa18.67■□□□□ 0.58
DDX54-204ENST00000546898 TRDNQ13061 729 aa18.67■□□□□ 0.58
DDX54-204ENST00000546898 UBE2Q1Q7Z7E8 422 aa18.67■□□□□ 0.58
DDX54-204ENST00000546898 MAP4K1Q92918 833 aa18.67■□□□□ 0.58
DDX54-204ENST00000546898 MAML3Q96JK9 1138 aa18.67■□□□□ 0.58
DDX54-204ENST00000546898 ZSCAN10Q96SZ4 725 aaPredicted RBP18.67■□□□□ 0.58
DDX54-204ENST00000546898 ZKSCAN3Q9BRR0 538 aa18.67■□□□□ 0.58
DDX54-204ENST00000546898 PRR12Q9ULL5 1215 aa18.67■□□□□ 0.58
DDX54-204ENST00000546898 TNKSO95271 1327 aa18.67■□□□□ 0.58
DDX54-204ENST00000546898 MYH6P13533 1939 aa18.66■□□□□ 0.58
DDX54-204ENST00000546898 CCND3P30281 292 aaPredicted RBP18.66■□□□□ 0.58
DDX54-204ENST00000546898 TKFCQ3LXA3 575 aa18.66■□□□□ 0.58
DDX54-204ENST00000546898 KIAA1211Q6ZU35 1233 aa18.66■□□□□ 0.58
DDX54-204ENST00000546898 CHMP4CQ96CF2 233 aa18.66■□□□□ 0.58
DDX54-204ENST00000546898 ESYT1Q9BSJ8 1104 aa18.66■□□□□ 0.58
DDX54-204ENST00000546898 UBAC1Q9BSL1 405 aa18.66■□□□□ 0.58
DDX54-204ENST00000546898 KAT14Q9H8E8 782 aa18.66■□□□□ 0.58
DDX54-204ENST00000546898 ZSWIM5Q9P217 1185 aa18.66■□□□□ 0.58
DDX54-204ENST00000546898 RIPK3Q9Y572 518 aa18.66■□□□□ 0.58
DDX54-204ENST00000546898 MSCO60682 206 aa18.65■□□□□ 0.58
DDX54-204ENST00000546898 CENPBP07199 599 aaPredicted RBP18.65■□□□□ 0.58
DDX54-204ENST00000546898 CYBAP13498 195 aa18.65■□□□□ 0.58
DDX54-204ENST00000546898 CYP2C19P33261 490 aa18.65■□□□□ 0.58
DDX54-204ENST00000546898 ZNF543Q08ER8 600 aa18.65■□□□□ 0.58
DDX54-204ENST00000546898 ZNF792Q3KQV3 632 aa18.65■□□□□ 0.58
DDX54-204ENST00000546898 GPATCH4Q5T3I0 446 aaKnown RBP18.65■□□□□ 0.58
DDX54-204ENST00000546898 SKAP1Q86WV1 359 aa18.65■□□□□ 0.58
DDX54-204ENST00000546898 ENAHQ8N8S7 591 aaPredicted RBP18.65■□□□□ 0.58
DDX54-204ENST00000546898 PNMA1Q8ND90 353 aa18.65■□□□□ 0.58
DDX54-204ENST00000546898 RANBP17Q9H2T7 1088 aaKnown RBP18.65■□□□□ 0.58
DDX54-204ENST00000546898 OGDHLQ9ULD0 1010 aa18.65■□□□□ 0.58
DDX54-204ENST00000546898 ZNF536O15090 1300 aa18.65■□□□□ 0.58
DDX54-204ENST00000546898 SMCHD1A6NHR9 2005 aa18.64■□□□□ 0.58
DDX54-204ENST00000546898 PGK2P07205 417 aa18.64■□□□□ 0.57
DDX54-204ENST00000546898 SLC4A3P48751 1232 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms