RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 ADCY6O43306 1168 aa13.16□□□□□ -0.3
TMEM116-203ENST00000546537 GJA9P57773 515 aa13.16□□□□□ -0.3
TMEM116-203ENST00000546537 KRT40Q6A162 431 aa13.16□□□□□ -0.3
TMEM116-203ENST00000546537 MAMDC4Q6UXC1 1216 aa13.16□□□□□ -0.3
TMEM116-203ENST00000546537 MIGA1Q8NAN2 632 aa13.16□□□□□ -0.3
TMEM116-203ENST00000546537 UPF3AQ9H1J1 476 aaKnown RBP13.16□□□□□ -0.3
TMEM116-203ENST00000546537 HIPK3Q9H422 1215 aa13.16□□□□□ -0.3
TMEM116-203ENST00000546537 PIH1D3Q9NQM4 214 aaKnown RBP13.16□□□□□ -0.3
TMEM116-203ENST00000546537 ZHX1Q9UKY1 873 aaPredicted RBP13.16□□□□□ -0.3
TMEM116-203ENST00000546537 EPOPA6NHQ4 379 aa13.15□□□□□ -0.3
TMEM116-203ENST00000546537 MPHOSPH10O00566 681 aaKnown RBP13.15□□□□□ -0.3
TMEM116-203ENST00000546537 CA3P07451 260 aa13.15□□□□□ -0.3
TMEM116-203ENST00000546537 ATP2A2P16615 1042 aaKnown RBP13.15□□□□□ -0.3
TMEM116-203ENST00000546537 ZAP70P43403 619 aa13.15□□□□□ -0.3
TMEM116-203ENST00000546537 CCL23P55773 120 aa13.15□□□□□ -0.3
TMEM116-203ENST00000546537 NHLH1Q02575 133 aa13.15□□□□□ -0.3
TMEM116-203ENST00000546537 GNASQ5JWF2 1037 aa13.15□□□□□ -0.3
TMEM116-203ENST00000546537 CCDC158Q5M9N0 1113 aa13.15□□□□□ -0.3
TMEM116-203ENST00000546537 SPICE1Q8N0Z3 855 aa13.15□□□□□ -0.3
TMEM116-203ENST00000546537 SLC43A3Q8NBI5 491 aa13.15□□□□□ -0.3
TMEM116-203ENST00000546537 VWCEQ96DN2 955 aa13.15□□□□□ -0.3
TMEM116-203ENST00000546537 ZNF512BQ96KM6 892 aaPredicted RBP13.15□□□□□ -0.3
TMEM116-203ENST00000546537 VCPKMTQ9H867 229 aa13.15□□□□□ -0.3
TMEM116-203ENST00000546537 SPC25Q9HBM1 224 aa13.15□□□□□ -0.3
TMEM116-203ENST00000546537 ZNF214Q9UL59 606 aaPredicted RBP13.15□□□□□ -0.3
TMEM116-203ENST00000546537 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
TMEM116-203ENST00000546537 COL4A4P53420 1690 aaPredicted RBP13.15□□□□□ -0.31
TMEM116-203ENST00000546537 WDR46O15213 610 aaKnown RBP13.14□□□□□ -0.31
TMEM116-203ENST00000546537 CTAGE5O15320 804 aa13.14□□□□□ -0.31
TMEM116-203ENST00000546537 COPB2P35606 906 aa13.14□□□□□ -0.31
TMEM116-203ENST00000546537 STAT3P40763 770 aa13.14□□□□□ -0.31
TMEM116-203ENST00000546537 NKX3-2P78367 333 aa13.14□□□□□ -0.31
TMEM116-203ENST00000546537 ACVR2BQ13705 512 aa13.14□□□□□ -0.31
TMEM116-203ENST00000546537 TMEM67Q5HYA8 995 aa13.14□□□□□ -0.31
TMEM116-203ENST00000546537 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
TMEM116-203ENST00000546537 TMEM179Q6ZVK1 233 aa13.14□□□□□ -0.31
TMEM116-203ENST00000546537 SIAH1Q8IUQ4 282 aa13.14□□□□□ -0.31
TMEM116-203ENST00000546537 RPUSD2Q8IZ73 545 aaKnown RBP13.14□□□□□ -0.31
TMEM116-203ENST00000546537 WNT8AQ9H1J5 351 aa13.14□□□□□ -0.31
TMEM116-203ENST00000546537 CERS4Q9HA82 394 aa13.14□□□□□ -0.31
TMEM116-203ENST00000546537 ARHGEF10LQ9HCE6 1279 aa13.14□□□□□ -0.31
TMEM116-203ENST00000546537 SMC4Q9NTJ3 1288 aa13.14□□□□□ -0.31
TMEM116-203ENST00000546537 DNAJC25-GNG10A0A024R161 153 aa13.13□□□□□ -0.31
TMEM116-203ENST00000546537 ZBBXA8MT70 800 aa13.13□□□□□ -0.31
TMEM116-203ENST00000546537 POLR3DP05423 398 aaPredicted RBP13.13□□□□□ -0.31
TMEM116-203ENST00000546537 G3BP1Q13283 466 aaKnown RBP eCLIP13.13□□□□□ -0.31
TMEM116-203ENST00000546537 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
TMEM116-203ENST00000546537 REPS2Q8NFH8 660 aa13.13□□□□□ -0.31
TMEM116-203ENST00000546537 DBNDD2Q9BQY9 259 aa13.13□□□□□ -0.31
TMEM116-203ENST00000546537 NOC4LQ9BVI4 516 aaKnown RBP13.13□□□□□ -0.31
TMEM116-203ENST00000546537 KCNH6Q9H252 994 aa13.13□□□□□ -0.31
TMEM116-203ENST00000546537 GPR108Q9NPR9 543 aa13.13□□□□□ -0.31
TMEM116-203ENST00000546537 SCN5AQ14524 2016 aa13.12□□□□□ -0.31
TMEM116-203ENST00000546537 VWA5AO00534 786 aa13.12□□□□□ -0.31
TMEM116-203ENST00000546537 IDH1O75874 414 aaKnown RBP13.12□□□□□ -0.31
TMEM116-203ENST00000546537 GNAI3P08754 354 aa13.12□□□□□ -0.31
TMEM116-203ENST00000546537 EVX2Q03828 476 aa13.12□□□□□ -0.31
TMEM116-203ENST00000546537 CCDC144BQ3MJ40 725 aa13.12□□□□□ -0.31
TMEM116-203ENST00000546537 TNNI3KQ59H18 835 aa13.12□□□□□ -0.31
TMEM116-203ENST00000546537 MAGEB6Q8N7X4 407 aa13.12□□□□□ -0.31
TMEM116-203ENST00000546537 ABHD16BQ9H3Z7 469 aa13.12□□□□□ -0.31
TMEM116-203ENST00000546537 SH2D4AQ9H788 454 aa13.12□□□□□ -0.31
TMEM116-203ENST00000546537 FBXO28Q9NVF7 368 aa13.12□□□□□ -0.31
TMEM116-203ENST00000546537 NOB1Q9ULX3 412 aaKnown RBP13.12□□□□□ -0.31
TMEM116-203ENST00000546537 FPGT-TNNI3KV9GXZ4 949 aa13.12□□□□□ -0.31
TMEM116-203ENST00000546537 WDFY4Q6ZS81 3184 aa13.12□□□□□ -0.31
TMEM116-203ENST00000546537 B4GALT4O60513 344 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 PFKMP08237 780 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 TAP1Q03518 808 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 GRB10Q13322 594 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 TMED8Q6PL24 325 aaPredicted RBP13.11□□□□□ -0.31
TMEM116-203ENST00000546537 CLEC10AQ8IUN9 316 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 FAM178BQ8IXR5 827 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 GJD3Q8N144 294 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 ARNTL2Q8WYA1 636 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 DDX11Q96FC9 970 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 SCLYQ96I15 445 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 FBXL18Q96ME1 805 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 AGBL1Q96MI9 1066 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 RIOK1Q9BRS2 568 aaKnown RBP13.11□□□□□ -0.31
TMEM116-203ENST00000546537 SEZ6LQ9BYH1 1024 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 API5Q9BZZ5 524 aaKnown RBP13.11□□□□□ -0.31
TMEM116-203ENST00000546537 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.11□□□□□ -0.31
TMEM116-203ENST00000546537 PPP1R9AQ9ULJ8 1098 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 GRIN2DO15399 1336 aa13.11□□□□□ -0.31
TMEM116-203ENST00000546537 BRWD1Q9NSI6 2320 aa13.1□□□□□ -0.31
TMEM116-203ENST00000546537 PNMA6EA0A0J9YXQ4 647 aa13.1□□□□□ -0.31
TMEM116-203ENST00000546537 E9PSI1 815 aa13.1□□□□□ -0.31
TMEM116-203ENST00000546537 LPXNO60711 386 aa13.1□□□□□ -0.31
TMEM116-203ENST00000546537 CABYRO75952 493 aa13.1□□□□□ -0.31
TMEM116-203ENST00000546537 ARHGEF15O94989 841 aa13.1□□□□□ -0.31
TMEM116-203ENST00000546537 ALADP13716 330 aa13.1□□□□□ -0.31
TMEM116-203ENST00000546537 BEX3Q00994 111 aa13.1□□□□□ -0.31
TMEM116-203ENST00000546537 ICA1Q05084 483 aa13.1□□□□□ -0.31
TMEM116-203ENST00000546537 ITGA7Q13683 1181 aa13.1□□□□□ -0.31
TMEM116-203ENST00000546537 TTLL4Q14679 1199 aa13.1□□□□□ -0.31
TMEM116-203ENST00000546537 CXCL17Q6UXB2 119 aa13.1□□□□□ -0.31
TMEM116-203ENST00000546537 UIMC1Q96RL1 719 aa13.1□□□□□ -0.31
TMEM116-203ENST00000546537 TRPV6Q9H1D0 765 aa13.1□□□□□ -0.31
TMEM116-203ENST00000546537 PTPRSQ13332 1948 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms