RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 NTRK3Q16288 839 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 ERCC6LQ2NKX8 1250 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 MAP7D1Q3KQU3 841 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 TTLL5Q6EMB2 1281 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 RSRC2Q7L4I2 434 aaKnown RBP7.35□□□□□ -1.23
SNHG1-225ENST00000545920 TMEM139Q8IV31 216 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 FAM160A2Q8N612 972 aaPredicted RBP7.35□□□□□ -1.23
SNHG1-225ENST00000545920 ANKRD20A12PQ8NF67 263 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 IGDCC4Q8TDY8 1250 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 STAG1Q8WVM7 1258 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 LPIN2Q92539 896 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 EXOC4Q96A65 974 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 IQCDQ96DY2 449 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 GSDMAQ96QA5 445 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 CARD10Q9BWT7 1032 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 SLC6A16Q9GZN6 736 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 AATFQ9NY61 560 aaKnown RBP eCLIP7.35□□□□□ -1.23
SNHG1-225ENST00000545920 RAI14Q9P0K7 980 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 RIPOR2Q9Y4F9 1068 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 MRFAP1Q9Y605 127 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 SLC12A7Q9Y666 1083 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 LAMA4Q16363 1823 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 LRP6O75581 1613 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 RTL9Q8NET4 1388 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 MROH7-TTC4A0A0A0MT08 1334 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 VWA3AA6NCI4 1184 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 AKR1B15C9JRZ8 316 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-225ENST00000545920 KIF5CO60282 957 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 URI1O94763 535 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-225ENST00000545920 MYL1P05976 194 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 CALM1P0DP23 149 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 CALM2P0DP24 149 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 CALM3P0DP25 149 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 CDK11BP21127 795 aaKnown RBP7.34□□□□□ -1.23
SNHG1-225ENST00000545920 CTHP32929 405 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 ZAP70P43403 619 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 TRAPPC10P48553 1259 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 ZC3H6P61129 1189 aaKnown RBP7.34□□□□□ -1.23
SNHG1-225ENST00000545920 PIP4K2BP78356 416 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 PPP2R3AQ06190 1150 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 MAP3K12Q12852 859 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 NCOA4Q13772 614 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 NR1I3Q14994 352 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 PUM3Q15397 648 aaKnown RBP7.34□□□□□ -1.23
SNHG1-225ENST00000545920 WHAMMP3Q1A5X7 153 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 TMEM67Q5HYA8 995 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 METTL24Q5JXM2 366 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 PLA2G2CQ5R387 149 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 AKNAD1Q5T1N1 836 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 SPATA1Q5VX52 437 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 NFXL1Q6ZNB6 911 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 ZNF662Q6ZS27 426 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 TTLL7Q6ZT98 887 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 METTL16Q86W50 562 aaKnown RBP7.34□□□□□ -1.23
SNHG1-225ENST00000545920 PPFIBP1Q86W92 1011 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 TMTC1Q8IUR5 882 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 DEPDC4Q8N2C3 294 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 RUBCNQ92622 972 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 ERCC4Q92889 916 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-225ENST00000545920 AIDAQ96BJ3 306 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 RPGRIP1Q96KN7 1286 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 STRBPQ96SI9 672 aaKnown RBP7.34□□□□□ -1.23
SNHG1-225ENST00000545920 UTP14AQ9BVJ6 771 aaKnown RBP7.34□□□□□ -1.23
SNHG1-225ENST00000545920 RNF26Q9BY78 433 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-225ENST00000545920 PUS7LQ9H0K6 701 aaKnown RBP7.34□□□□□ -1.23
SNHG1-225ENST00000545920 LY9Q9HBG7 655 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 BRMS1Q9HCU9 246 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 PRDM9Q9NQV7 894 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 RBM28Q9NW13 759 aaKnown RBP7.34□□□□□ -1.23
SNHG1-225ENST00000545920 ZNF446Q9NWS9 450 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 PKD2L1Q9P0L9 805 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 PCDHA5Q9Y5H7 936 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 TIAM2Q8IVF5 1701 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 RIC1Q4ADV7 1423 aa7.34□□□□□ -1.23
SNHG1-225ENST00000545920 UBN2Q6ZU65 1347 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 LRRC10BA6NIK2 292 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 BIN1O00499 593 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 IFIT3O14879 490 aaKnown RBP7.33□□□□□ -1.24
SNHG1-225ENST00000545920 PDE8AO60658 829 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 PDE8BO95263 885 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 IVLP07476 585 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 SLC5A1P13866 664 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 IL2RBP14784 551 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 PDE6AP16499 860 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 RASA1P20936 1047 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 PPP1R2P41236 205 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 CTSWP56202 376 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 GNG11P61952 73 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 RTN1Q16799 776 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 SLC9C2Q5TAH2 1124 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 CC2D1AQ6P1N0 951 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-225ENST00000545920 LDHAL6AQ6ZMR3 332 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 RASGRP2Q7LDG7 609 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 SRGAP1Q7Z6B7 1085 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 RNF135Q8IUD6 432 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 VGLL2Q8N8G2 317 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 TC2NQ8N9U0 490 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 IQUBQ8NA54 791 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 PLPP7Q8NBV4 271 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 MSANTD4Q8NCY6 345 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms