RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 MSANTD4Q8NCY6 345 aa17.24■□□□□ 0.35
CNN3-207ENST00000545882 GPKOWQ92917 476 aaPredicted RBP eCLIP17.24■□□□□ 0.35
CNN3-207ENST00000545882 PNKPQ96T60 521 aa17.24■□□□□ 0.35
CNN3-207ENST00000545882 IL17RBQ9NRM6 502 aa17.24■□□□□ 0.35
CNN3-207ENST00000545882 MAPK8IP1Q9UQF2 711 aa17.24■□□□□ 0.35
CNN3-207ENST00000545882 PDS5AQ29RF7 1337 aaKnown RBP17.24■□□□□ 0.35
CNN3-207ENST00000545882 SLC10A5Q5PT55 438 aa17.23■□□□□ 0.35
CNN3-207ENST00000545882 STAG2Q8N3U4 1231 aa17.23■□□□□ 0.35
CNN3-207ENST00000545882 RASGRP4Q8TDF6 673 aa17.23■□□□□ 0.35
CNN3-207ENST00000545882 CHP1Q99653 195 aa17.23■□□□□ 0.35
CNN3-207ENST00000545882 TFCP2L1Q9NZI6 479 aa17.23■□□□□ 0.35
CNN3-207ENST00000545882 RAB21Q9UL25 225 aa17.23■□□□□ 0.35
CNN3-207ENST00000545882 REXO2Q9Y3B8 237 aaKnown RBP17.23■□□□□ 0.35
CNN3-207ENST00000545882 CTAGE9A4FU28 777 aa17.23■□□□□ 0.35
CNN3-207ENST00000545882 TRIM49BA6NDI0 452 aa17.23■□□□□ 0.35
CNN3-207ENST00000545882 PMS1P54277 932 aaKnown RBP17.23■□□□□ 0.35
CNN3-207ENST00000545882 ST5P78524 1137 aa17.23■□□□□ 0.35
CNN3-207ENST00000545882 FAM98CQ17RN3 349 aaKnown RBP17.23■□□□□ 0.35
CNN3-207ENST00000545882 KIF4BQ2VIQ3 1234 aa17.23■□□□□ 0.35
CNN3-207ENST00000545882 CYP26C1Q6V0L0 522 aa17.23■□□□□ 0.35
CNN3-207ENST00000545882 ADSSL1Q8N142 457 aa17.23■□□□□ 0.35
CNN3-207ENST00000545882 NUP88Q99567 741 aaPredicted RBP17.23■□□□□ 0.35
CNN3-207ENST00000545882 RMND1Q9NWS8 449 aa17.23■□□□□ 0.35
CNN3-207ENST00000545882 ARPP21Q9UBL0 812 aaPredicted RBP17.23■□□□□ 0.35
CNN3-207ENST00000545882 PCDHA4Q9UN74 947 aa17.23■□□□□ 0.35
CNN3-207ENST00000545882 CDK5RAP2Q96SN8 1893 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 BTAF1O14981 1849 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 CCDC66A2RUB6 948 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 TSPY2A6NKD2 308 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 KLRC4O43908 158 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 USP17L8P0C7I0 530 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 KRT9P35527 623 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 USP5P45974 858 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 TUBB2AQ13885 445 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 TRIM14Q14142 442 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 BEND6Q5SZJ8 279 aaPredicted RBP17.22■□□□□ 0.35
CNN3-207ENST00000545882 SMIM5Q71RC9 77 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 LRRC15Q8TF66 581 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 HNRNPLLQ8WVV9 542 aaKnown RBP17.22■□□□□ 0.35
CNN3-207ENST00000545882 SLF1Q9BQI6 1058 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 TUBB2BQ9BVA1 445 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 TMEM60Q9H2L4 133 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 SH3GLB2Q9NR46 395 aa17.22■□□□□ 0.35
CNN3-207ENST00000545882 PP2D1A8MPX8 630 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 H3BQF6 201 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 PARP1P09874 1014 aaKnown RBP17.21■□□□□ 0.35
CNN3-207ENST00000545882 CALML3P27482 149 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 HIBADHP31937 336 aaKnown RBP17.21■□□□□ 0.35
CNN3-207ENST00000545882 STAT6P42226 847 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 AMPD2Q01433 879 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 VPS72Q15906 364 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 SLC4A8Q2Y0W8 1093 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 BICDL1Q6ZP65 573 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 ZNF507Q8TCN5 953 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 NAPGQ99747 312 aaPredicted RBP17.21■□□□□ 0.35
CNN3-207ENST00000545882 DISC1Q9NRI5 854 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 MKRN1Q9UHC7 482 aaKnown RBP17.21■□□□□ 0.35
CNN3-207ENST00000545882 NHSQ6T4R5 1651 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 H7C1D1 291 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 KIF5BP33176 963 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 UBXN1Q04323 297 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 TBC1D9BQ66K14 1250 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 TXNRD3Q86VQ6 643 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 ANKS1AQ92625 1134 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 PCDHA6Q9UN73 950 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 PCDHA8Q9Y5H6 950 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 THSD7AQ9UPZ6 1657 aa17.21■□□□□ 0.35
CNN3-207ENST00000545882 NAV1Q8NEY1 1877 aa17.2■□□□□ 0.34
CNN3-207ENST00000545882 IRS2Q9Y4H2 1338 aa17.2■□□□□ 0.34
CNN3-207ENST00000545882 TTC26A0AVF1 554 aa17.2■□□□□ 0.34
CNN3-207ENST00000545882 RPS8P62241 208 aaKnown RBP17.2■□□□□ 0.34
CNN3-207ENST00000545882 TFAP4Q01664 338 aa17.2■□□□□ 0.34
CNN3-207ENST00000545882 GRM4Q14833 912 aa17.2■□□□□ 0.34
CNN3-207ENST00000545882 WWC2Q6AWC2 1192 aa17.2■□□□□ 0.34
CNN3-207ENST00000545882 MB21D1Q8N884 522 aa17.2■□□□□ 0.34
CNN3-207ENST00000545882 MYO1AQ9UBC5 1043 aa17.2■□□□□ 0.34
CNN3-207ENST00000545882 MAD2L2Q9UI95 211 aa17.2■□□□□ 0.34
CNN3-207ENST00000545882 JAG2Q9Y219 1238 aa17.2■□□□□ 0.34
CNN3-207ENST00000545882 KCNQ4P56696 695 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 RC3H1Q5TC82 1133 aaKnown RBP17.19■□□□□ 0.34
CNN3-207ENST00000545882 C12orf60Q5U649 245 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 DGKHQ86XP1 1220 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 ANKRD20A12PQ8NF67 263 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 DYNLL2Q96FJ2 89 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 KAT14Q9H8E8 782 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 MCM9Q9NXL9 1143 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 TRIM10Q9UDY6 481 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 EPN1Q9Y6I3 576 aaPredicted RBP17.19■□□□□ 0.34
CNN3-207ENST00000545882 LGALS16A8MUM7 142 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 CYTH3O43739 400 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 NDUFA10O95299 355 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 KCNB1Q14721 858 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 WHAMMP3Q1A5X7 153 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 WDR59Q6PJI9 974 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 PTF1AQ7RTS3 328 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 PNMA1Q8ND90 353 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 ABCB6Q9NP58 842 aa17.19■□□□□ 0.34
CNN3-207ENST00000545882 POTEB2H3BUK9 544 aa17.18■□□□□ 0.34
CNN3-207ENST00000545882 GYS2P54840 703 aa17.18■□□□□ 0.34
CNN3-207ENST00000545882 HNRNPH2P55795 449 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms