RNA–Protein interactions for RNA: ENST00000545620.5

SMAD5-212, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD5, Length 6,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-212ENST00000545620 NAA25Q14CX7 972 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 ARMCX5Q6P1M9 558 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 TMED8Q6PL24 325 aaPredicted RBP5.4□□□□□ -1.55
SMAD5-212ENST00000545620 CCDC84Q86UT8 332 aaPredicted RBP5.4□□□□□ -1.55
SMAD5-212ENST00000545620 C10orf67Q8IYJ2 551 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 ANKRD20A12PQ8NF67 263 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 ZSCAN10Q96SZ4 725 aaPredicted RBP5.4□□□□□ -1.55
SMAD5-212ENST00000545620 SLC26A6Q9BXS9 759 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 GLIS2Q9BZE0 524 aaPredicted RBP5.4□□□□□ -1.55
SMAD5-212ENST00000545620 ZC4H2Q9NQZ6 224 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 POLR3EQ9NVU0 708 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 LRP2BPQ9P2M1 347 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 MTMR7Q9Y216 660 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 MAGEB6P1A0A0J9YX57 407 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 ZFYP08048 801 aaPredicted RBP5.4□□□□□ -1.55
SMAD5-212ENST00000545620 SHMT1P34896 483 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 TMEM67Q5HYA8 995 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 ARMC9Q7Z3E5 817 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 HOMER1Q86YM7 354 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 HPS3Q969F9 1004 aa5.4□□□□□ -1.55
SMAD5-212ENST00000545620 V9GY48 417 aaPredicted RBP5.4□□□□□ -1.55
SMAD5-212ENST00000545620 DHX16O60231 1041 aaKnown RBP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 MMP10P09238 476 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 SNAP25P60880 206 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 SLC39A14Q15043 492 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 USP17L2Q6R6M4 530 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 KIAA1328Q86T90 577 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 IRF2BP1Q8IU81 584 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 EEF2KMTQ96G04 330 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 FRMD4BQ9Y2L6 1034 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 FREM2Q5SZK8 3169 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 F8W031 263 aaPredicted RBP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 ZRANB2O95218 330 aaKnown RBP eCLIP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 METAP2P50579 478 aaKnown RBP eCLIP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 CCZ1BP86790 482 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 CCZ1P86791 482 aaPredicted RBP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 WDR75Q8IWA0 830 aaKnown RBP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 ALG1Q9BT22 464 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 BRIP1Q9BX63 1249 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 GPR75-ASB3A0A0A6YYF3 556 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 TPM1P09493 284 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 RFC4P35249 363 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 CEP57Q86XR8 500 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 CNBD1Q8NA66 436 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 TMEM260Q9NX78 707 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 RAI14Q9P0K7 980 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 TRPC5Q9UL62 973 aaPredicted RBP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 PTPRFP10586 1907 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 POLR3GO15318 223 aaPredicted RBP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 PEX10O60683 326 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 LETM1O95202 739 aaPredicted RBP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 AKR1B1P15121 316 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 IGHMBP2P38935 993 aaKnown RBP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 WWC2Q6AWC2 1192 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 CCDC70Q6NSX1 233 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 KCNK18Q7Z418 384 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 CEP95Q96GE4 821 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 NLRP3Q96P20 1036 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 CNTNAP1P78357 1384 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 EIF6P56537 245 aaKnown RBP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 RESP18Q5W5W9 173 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 C15orf52Q6ZUT6 534 aaKnown RBP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 SMARCC1Q92922 1105 aaPredicted RBP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 NAPBQ9H115 298 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 CSRNP2Q9H175 543 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 OTOFQ9HC10 1997 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 ANO1Q5XXA6 986 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 TMTC3Q6ZXV5 915 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 SH3RF1Q7Z6J0 888 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 RPUSD2Q8IZ73 545 aaKnown RBP5.39□□□□□ -1.55
SMAD5-212ENST00000545620 CEP63Q96MT8 703 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 TMEM47Q9BQJ4 181 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 TUBE1Q9UJT0 475 aa5.39□□□□□ -1.55
SMAD5-212ENST00000545620 IFIT3O14879 490 aaKnown RBP5.38□□□□□ -1.55
SMAD5-212ENST00000545620 ZNF202O95125 648 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 KRT32Q14532 448 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 PPP2R5AQ15172 486 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 LRRC23Q53EV4 343 aaPredicted RBP5.38□□□□□ -1.55
SMAD5-212ENST00000545620 GJC2Q5T442 439 aaPredicted RBP5.38□□□□□ -1.55
SMAD5-212ENST00000545620 ADALQ6DHV7 355 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 DIS3L2Q8IYB7 885 aaKnown RBP5.38□□□□□ -1.55
SMAD5-212ENST00000545620 TMCO5AQ8N6Q1 288 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 TSPY26PQ9H489 355 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 SATB2Q9UPW6 733 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 CELSR3Q9NYQ7 3312 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 STK36Q9NRP7 1315 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 WDR90Q96KV7 1748 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 USP17L5A8MUK1 530 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 SKOR2Q2VWA4 1001 aaPredicted RBP5.38□□□□□ -1.55
SMAD5-212ENST00000545620 RNF187Q5TA31 235 aaPredicted RBP5.38□□□□□ -1.55
SMAD5-212ENST00000545620 RNF20Q5VTR2 975 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 PDCL2Q8N4E4 241 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 FAM184AQ8NB25 1140 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 ZNF219Q9P2Y4 722 aaPredicted RBP5.38□□□□□ -1.55
SMAD5-212ENST00000545620 PDS5AQ29RF7 1337 aaKnown RBP5.38□□□□□ -1.55
SMAD5-212ENST00000545620 UQCRFS1P1P0C7P4 283 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 CDC42EP5Q6NZY7 148 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 TPTE2Q6XPS3 522 aa5.38□□□□□ -1.55
SMAD5-212ENST00000545620 DAAM2Q86T65 1068 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms