RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 TEX13BQ9BXU2 312 aa16.45■□□□□ 0.22
VAMP1-208ENST00000544432 NBPF3Q9H094 633 aa16.45■□□□□ 0.22
VAMP1-208ENST00000544432 SLC38A10Q9HBR0 1119 aa16.45■□□□□ 0.22
VAMP1-208ENST00000544432 STX8Q9UNK0 236 aa16.45■□□□□ 0.22
VAMP1-208ENST00000544432 MYH4Q9Y623 1939 aa16.45■□□□□ 0.22
VAMP1-208ENST00000544432 ZNF213O14771 459 aa16.44■□□□□ 0.22
VAMP1-208ENST00000544432 NMT2O60551 498 aa16.44■□□□□ 0.22
VAMP1-208ENST00000544432 SLC1A4P43007 532 aa16.44■□□□□ 0.22
VAMP1-208ENST00000544432 OAZ1P54368 228 aa16.44■□□□□ 0.22
VAMP1-208ENST00000544432 HAND2P61296 217 aa16.44■□□□□ 0.22
VAMP1-208ENST00000544432 RCSD1Q6JBY9 416 aa16.44■□□□□ 0.22
VAMP1-208ENST00000544432 TTC14Q96N46 770 aa16.44■□□□□ 0.22
VAMP1-208ENST00000544432 HTATIP2Q9BUP3 242 aa16.44■□□□□ 0.22
VAMP1-208ENST00000544432 TOMM22Q9NS69 142 aa16.44■□□□□ 0.22
VAMP1-208ENST00000544432 CTNNA3Q9UI47 895 aa16.44■□□□□ 0.22
VAMP1-208ENST00000544432 DIS3Q9Y2L1 958 aaKnown RBP16.44■□□□□ 0.22
VAMP1-208ENST00000544432 RAD50Q92878 1312 aa16.44■□□□□ 0.22
VAMP1-208ENST00000544432 TMEM232C9JQI7 657 aa16.43■□□□□ 0.22
VAMP1-208ENST00000544432 TOP1P11387 765 aaKnown RBP16.43■□□□□ 0.22
VAMP1-208ENST00000544432 MCCP23508 829 aa16.43■□□□□ 0.22
VAMP1-208ENST00000544432 LHX8Q68G74 356 aa16.43■□□□□ 0.22
VAMP1-208ENST00000544432 KIFC2Q96AC6 838 aa16.43■□□□□ 0.22
VAMP1-208ENST00000544432 MMP19Q99542 508 aa16.43■□□□□ 0.22
VAMP1-208ENST00000544432 MSCO60682 206 aa16.42■□□□□ 0.22
VAMP1-208ENST00000544432 CCND3P30281 292 aaPredicted RBP16.42■□□□□ 0.22
VAMP1-208ENST00000544432 STAT2P52630 851 aa16.42■□□□□ 0.22
VAMP1-208ENST00000544432 KCTD2Q14681 263 aa16.42■□□□□ 0.22
VAMP1-208ENST00000544432 RRP12Q5JTH9 1297 aaKnown RBP16.42■□□□□ 0.22
VAMP1-208ENST00000544432 SNRNP48Q6IEG0 339 aaKnown RBP16.42■□□□□ 0.22
VAMP1-208ENST00000544432 NECAB2Q7Z6G3 386 aa16.42■□□□□ 0.22
VAMP1-208ENST00000544432 TBC1D10CQ8IV04 446 aa16.42■□□□□ 0.22
VAMP1-208ENST00000544432 DCAF4Q8WV16 495 aa16.42■□□□□ 0.22
VAMP1-208ENST00000544432 RUFY2Q8WXA3 655 aa16.42■□□□□ 0.22
VAMP1-208ENST00000544432 ESR2Q92731 530 aa16.42■□□□□ 0.22
VAMP1-208ENST00000544432 CTDP1Q9Y5B0 961 aaPredicted RBP16.42■□□□□ 0.22
VAMP1-208ENST00000544432 CHMLP26374 656 aa16.41■□□□□ 0.22
VAMP1-208ENST00000544432 CYP2C19P33261 490 aa16.41■□□□□ 0.22
VAMP1-208ENST00000544432 MNX1P50219 401 aaPredicted RBP16.41■□□□□ 0.22
VAMP1-208ENST00000544432 IMMTQ16891 758 aaKnown RBP16.41■□□□□ 0.22
VAMP1-208ENST00000544432 ZNF792Q3KQV3 632 aa16.41■□□□□ 0.22
VAMP1-208ENST00000544432 CCDC178Q5BJE1 867 aa16.41■□□□□ 0.22
VAMP1-208ENST00000544432 CHST13Q8NET6 341 aa16.41■□□□□ 0.22
VAMP1-208ENST00000544432 MAML3Q96JK9 1138 aa16.41■□□□□ 0.22
VAMP1-208ENST00000544432 TMEM47Q9BQJ4 181 aa16.41■□□□□ 0.22
VAMP1-208ENST00000544432 FBXO40Q9UH90 709 aa16.41■□□□□ 0.22
VAMP1-208ENST00000544432 NRBP1Q9UHY1 535 aa16.41■□□□□ 0.22
VAMP1-208ENST00000544432 RIPK3Q9Y572 518 aa16.41■□□□□ 0.22
VAMP1-208ENST00000544432 COL11A1P12107 1806 aaPredicted RBP16.4■□□□□ 0.22
VAMP1-208ENST00000544432 CEP290O15078 2479 aa16.4■□□□□ 0.22
VAMP1-208ENST00000544432 CYBAP13498 195 aa16.4■□□□□ 0.22
VAMP1-208ENST00000544432 BTNL9Q6UXG8 535 aa16.4■□□□□ 0.22
VAMP1-208ENST00000544432 DGKHQ86XP1 1220 aa16.4■□□□□ 0.22
VAMP1-208ENST00000544432 MSL3Q8N5Y2 521 aaKnown RBP16.4■□□□□ 0.22
VAMP1-208ENST00000544432 DPF3Q92784 378 aa16.4■□□□□ 0.22
VAMP1-208ENST00000544432 PAWRQ96IZ0 340 aaKnown RBP16.4■□□□□ 0.22
VAMP1-208ENST00000544432 RAVER2Q9HCJ3 691 aaKnown RBP16.4■□□□□ 0.22
VAMP1-208ENST00000544432 DNAJC25-GNG10A0A024R161 153 aa16.39■□□□□ 0.21
VAMP1-208ENST00000544432 TKFCQ3LXA3 575 aa16.39■□□□□ 0.21
VAMP1-208ENST00000544432 KCTD1Q719H9 257 aa16.39■□□□□ 0.21
VAMP1-208ENST00000544432 CPXCR1Q8N123 301 aa16.39■□□□□ 0.21
VAMP1-208ENST00000544432 TRPV1Q8NER1 839 aa16.39■□□□□ 0.21
VAMP1-208ENST00000544432 ANKS1AQ92625 1134 aa16.39■□□□□ 0.21
VAMP1-208ENST00000544432 IL25Q9H293 177 aa16.39■□□□□ 0.21
VAMP1-208ENST00000544432 DDX20Q9UHI6 824 aaKnown RBP16.39■□□□□ 0.21
VAMP1-208ENST00000544432 NEDD4P46934 1319 aa16.39■□□□□ 0.21
VAMP1-208ENST00000544432 PGK2P07205 417 aa16.38■□□□□ 0.21
VAMP1-208ENST00000544432 IKQ13123 557 aaPredicted RBP16.38■□□□□ 0.21
VAMP1-208ENST00000544432 CENPQQ7L2Z9 268 aaPredicted RBP16.38■□□□□ 0.21
VAMP1-208ENST00000544432 IQCA1Q86XH1 822 aa16.38■□□□□ 0.21
VAMP1-208ENST00000544432 DIS3LQ8TF46 1054 aaKnown RBP16.38■□□□□ 0.21
VAMP1-208ENST00000544432 DDX11Q96FC9 970 aa16.38■□□□□ 0.21
VAMP1-208ENST00000544432 TINF2Q9BSI4 451 aa16.38■□□□□ 0.21
VAMP1-208ENST00000544432 KRT23Q9C075 422 aa16.38■□□□□ 0.21
VAMP1-208ENST00000544432 CNNM2Q9H8M5 875 aa16.38■□□□□ 0.21
VAMP1-208ENST00000544432 PRR12Q9ULL5 1215 aa16.38■□□□□ 0.21
VAMP1-208ENST00000544432 NR2E3Q9Y5X4 410 aa16.38■□□□□ 0.21
VAMP1-208ENST00000544432 ZNF536O15090 1300 aa16.38■□□□□ 0.21
VAMP1-208ENST00000544432 ZNFX1Q9P2E3 1918 aaKnown RBP16.37■□□□□ 0.21
VAMP1-208ENST00000544432 SEPT4O43236 478 aa16.37■□□□□ 0.21
VAMP1-208ENST00000544432 SNHG28P0DPA3 235 aa16.37■□□□□ 0.21
VAMP1-208ENST00000544432 COL6A1P12109 1028 aa16.37■□□□□ 0.21
VAMP1-208ENST00000544432 CNGA1P29973 690 aa16.37■□□□□ 0.21
VAMP1-208ENST00000544432 MAMDC4Q6UXC1 1216 aa16.37■□□□□ 0.21
VAMP1-208ENST00000544432 ZNF467Q7Z7K2 595 aaPredicted RBP16.37■□□□□ 0.21
VAMP1-208ENST00000544432 C11orf49Q9H6J7 331 aa16.37■□□□□ 0.21
VAMP1-208ENST00000544432 ZSWIM5Q9P217 1185 aa16.37■□□□□ 0.21
VAMP1-208ENST00000544432 ISY1Q9ULR0 285 aaKnown RBP16.37■□□□□ 0.21
VAMP1-208ENST00000544432 SGSM2O43147 1006 aa16.36■□□□□ 0.21
VAMP1-208ENST00000544432 KDM4AO75164 1064 aa16.36■□□□□ 0.21
VAMP1-208ENST00000544432 PDHBP11177 359 aa16.36■□□□□ 0.21
VAMP1-208ENST00000544432 ZNF543Q08ER8 600 aa16.36■□□□□ 0.21
VAMP1-208ENST00000544432 CCDC96Q2M329 555 aa16.36■□□□□ 0.21
VAMP1-208ENST00000544432 RANBP17Q9H2T7 1088 aaKnown RBP16.36■□□□□ 0.21
VAMP1-208ENST00000544432 ACAD9Q9H845 621 aa16.36■□□□□ 0.21
VAMP1-208ENST00000544432 PNMA2Q9UL42 364 aa16.36■□□□□ 0.21
VAMP1-208ENST00000544432 SYNGAP1Q96PV0 1343 aa16.36■□□□□ 0.21
VAMP1-208ENST00000544432 B4E1Z4 1266 aa16.35■□□□□ 0.21
VAMP1-208ENST00000544432 H0YGN5 161 aa16.35■□□□□ 0.21
VAMP1-208ENST00000544432 SYDE2Q5VT97 1194 aa16.35■□□□□ 0.21
VAMP1-208ENST00000544432 TTBK2Q6IQ55 1244 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms