RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 CNPY2Q9Y2B0 182 aa18.66■□□□□ 0.58
CD4-212ENST00000544344 RIPK3Q9Y572 518 aa18.66■□□□□ 0.58
CD4-212ENST00000544344 MCM3APO60318 1980 aa18.65■□□□□ 0.58
CD4-212ENST00000544344 MOXD2PA6NHM9 499 aa18.65■□□□□ 0.58
CD4-212ENST00000544344 DCDC2CA8MYV0 355 aa18.65■□□□□ 0.58
CD4-212ENST00000544344 COPB2P35606 906 aa18.65■□□□□ 0.58
CD4-212ENST00000544344 PBX2P40425 430 aa18.65■□□□□ 0.58
CD4-212ENST00000544344 HSP90AB4PQ58FF6 505 aa18.65■□□□□ 0.58
CD4-212ENST00000544344 MFSD5Q6N075 450 aa18.65■□□□□ 0.58
CD4-212ENST00000544344 MSL3Q8N5Y2 521 aaKnown RBP18.65■□□□□ 0.58
CD4-212ENST00000544344 NUP133Q8WUM0 1156 aa18.65■□□□□ 0.58
CD4-212ENST00000544344 ZBED9Q6R2W3 1325 aa18.65■□□□□ 0.58
CD4-212ENST00000544344 SYNGAP1Q96PV0 1343 aa18.65■□□□□ 0.58
CD4-212ENST00000544344 MYO9BQ13459 2157 aa18.65■□□□□ 0.58
CD4-212ENST00000544344 MYH7P12883 1935 aa18.64■□□□□ 0.58
CD4-212ENST00000544344 GRXCR1A8MXD5 290 aa18.64■□□□□ 0.57
CD4-212ENST00000544344 CST5P28325 142 aaPredicted RBP18.64■□□□□ 0.57
CD4-212ENST00000544344 TMEM240Q5SV17 173 aa18.64■□□□□ 0.57
CD4-212ENST00000544344 CLASRPQ8N2M8 674 aaKnown RBP18.64■□□□□ 0.57
CD4-212ENST00000544344 NUP88Q99567 741 aaPredicted RBP18.64■□□□□ 0.57
CD4-212ENST00000544344 PBX4Q9BYU1 374 aa18.64■□□□□ 0.57
CD4-212ENST00000544344 GOPCQ9HD26 462 aa18.64■□□□□ 0.57
CD4-212ENST00000544344 PAG1Q9NWQ8 432 aa18.64■□□□□ 0.57
CD4-212ENST00000544344 FAM184BQ9ULE4 1060 aa18.64■□□□□ 0.57
CD4-212ENST00000544344 CHD7Q9P2D1 2997 aa18.64■□□□□ 0.57
CD4-212ENST00000544344 TNFRSF10AO00220 468 aa18.63■□□□□ 0.57
CD4-212ENST00000544344 DUSP11O75319 330 aaKnown RBP18.63■□□□□ 0.57
CD4-212ENST00000544344 CTR9Q6PD62 1173 aa18.63■□□□□ 0.57
CD4-212ENST00000544344 KIF1BPQ96EK5 621 aa18.63■□□□□ 0.57
CD4-212ENST00000544344 FGD4Q96M96 766 aa18.63■□□□□ 0.57
CD4-212ENST00000544344 TEX13BQ9BXU2 312 aa18.63■□□□□ 0.57
CD4-212ENST00000544344 ELP1O95163 1332 aa18.63■□□□□ 0.57
CD4-212ENST00000544344 APBB1O00213 710 aa18.62■□□□□ 0.57
CD4-212ENST00000544344 SNRNP48Q6IEG0 339 aaKnown RBP18.62■□□□□ 0.57
CD4-212ENST00000544344 SIRT2Q8IXJ6 389 aa18.62■□□□□ 0.57
CD4-212ENST00000544344 PANK1Q8TE04 598 aa18.62■□□□□ 0.57
CD4-212ENST00000544344 SLF1Q9BQI6 1058 aa18.62■□□□□ 0.57
CD4-212ENST00000544344 BOLA2Q9H3K6 86 aa18.62■□□□□ 0.57
CD4-212ENST00000544344 ZHX1Q9UKY1 873 aaPredicted RBP18.62■□□□□ 0.57
CD4-212ENST00000544344 NCOR1O75376 2440 aa18.61■□□□□ 0.57
CD4-212ENST00000544344 CTAGE5O15320 804 aa18.61■□□□□ 0.57
CD4-212ENST00000544344 ASGR1P07306 291 aa18.61■□□□□ 0.57
CD4-212ENST00000544344 IFIT2P09913 472 aaKnown RBP18.61■□□□□ 0.57
CD4-212ENST00000544344 CSF2RAP15509 400 aa18.61■□□□□ 0.57
CD4-212ENST00000544344 COL9A1P20849 921 aa18.61■□□□□ 0.57
CD4-212ENST00000544344 PPIGQ13427 754 aaKnown RBP eCLIP18.61■□□□□ 0.57
CD4-212ENST00000544344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.61■□□□□ 0.57
CD4-212ENST00000544344 ZNF467Q7Z7K2 595 aaPredicted RBP18.61■□□□□ 0.57
CD4-212ENST00000544344 UPF3AQ9H1J1 476 aaKnown RBP18.61■□□□□ 0.57
CD4-212ENST00000544344 PRDM12Q9H4Q4 367 aa18.61■□□□□ 0.57
CD4-212ENST00000544344 REV3LO60673 3130 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 MROH7Q68CQ1 1323 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 ATP2A1O14983 1001 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 RAD21O60216 631 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 ATP5JP18859 108 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 ACVR2BQ13705 512 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 ADGRE1Q14246 886 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 UBE3CQ15386 1083 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 AKNAD1Q5T1N1 836 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 FAM126BQ8IXS8 530 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 DDX11Q96FC9 970 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 GLT1D1Q96MS3 346 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 HAUS7Q99871 368 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 PUS7LQ9H0K6 701 aaKnown RBP18.6■□□□□ 0.57
CD4-212ENST00000544344 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.6■□□□□ 0.57
CD4-212ENST00000544344 SLC4A4Q9Y6R1 1079 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 BDP1A6H8Y1 2624 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 GBF1Q92538 1859 aa18.6■□□□□ 0.57
CD4-212ENST00000544344 F5H6K3 240 aa18.59■□□□□ 0.57
CD4-212ENST00000544344 ARVCFO00192 962 aa18.59■□□□□ 0.57
CD4-212ENST00000544344 NDUFB10O96000 172 aa18.59■□□□□ 0.57
CD4-212ENST00000544344 C6orf222P0C671 652 aaPredicted RBP18.59■□□□□ 0.57
CD4-212ENST00000544344 ACRP10323 421 aa18.59■□□□□ 0.57
CD4-212ENST00000544344 RASA1P20936 1047 aa18.59■□□□□ 0.57
CD4-212ENST00000544344 GJA9P57773 515 aa18.59■□□□□ 0.57
CD4-212ENST00000544344 KLRC3Q07444 240 aa18.59■□□□□ 0.57
CD4-212ENST00000544344 CCDC144BQ3MJ40 725 aa18.59■□□□□ 0.57
CD4-212ENST00000544344 ZNF365Q70YC5 407 aa18.59■□□□□ 0.57
CD4-212ENST00000544344 AMOTL1Q8IY63 956 aa18.59■□□□□ 0.57
CD4-212ENST00000544344 PCSK9Q8NBP7 692 aaKnown RBP18.59■□□□□ 0.57
CD4-212ENST00000544344 ATXN2LQ8WWM7 1075 aaKnown RBP18.59■□□□□ 0.57
CD4-212ENST00000544344 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.59■□□□□ 0.57
CD4-212ENST00000544344 KATNBL1Q9H079 304 aa18.59■□□□□ 0.57
CD4-212ENST00000544344 NKX3-2P78367 333 aa18.58■□□□□ 0.56
CD4-212ENST00000544344 PRPF38AQ8NAV1 312 aaKnown RBP18.58■□□□□ 0.56
CD4-212ENST00000544344 PPM1EQ8WY54 764 aa18.58■□□□□ 0.56
CD4-212ENST00000544344 ASB2Q96Q27 587 aa18.58■□□□□ 0.56
CD4-212ENST00000544344 GAS2L1Q99501 681 aaPredicted RBP18.58■□□□□ 0.56
CD4-212ENST00000544344 PPP1R12CQ9BZL4 782 aa18.58■□□□□ 0.56
CD4-212ENST00000544344 ABHD16BQ9H3Z7 469 aa18.58■□□□□ 0.56
CD4-212ENST00000544344 NYAP2Q9P242 653 aa18.58■□□□□ 0.56
CD4-212ENST00000544344 RAPGEFL1Q9UHV5 662 aa18.58■□□□□ 0.56
CD4-212ENST00000544344 MYH4Q9Y623 1939 aa18.57■□□□□ 0.56
CD4-212ENST00000544344 A0A0U1RQG5 324 aaPredicted RBP18.57■□□□□ 0.56
CD4-212ENST00000544344 CD4P01730 458 aa18.57■□□□□ 0.56
CD4-212ENST00000544344 CCDC129Q6ZRS4 1044 aa18.57■□□□□ 0.56
CD4-212ENST00000544344 CPXCR1Q8N123 301 aa18.57■□□□□ 0.56
CD4-212ENST00000544344 TMEM199Q8N511 208 aa18.57■□□□□ 0.56
CD4-212ENST00000544344 BCL11AQ9H165 835 aa18.57■□□□□ 0.56
CD4-212ENST00000544344 SLC38A10Q9HBR0 1119 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms