RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.67■□□□□ 0.1
HCFC2-202ENST00000544223 SMCHD1A6NHR9 2005 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 POLR2DO15514 142 aaKnown RBP15.66■□□□□ 0.1
HCFC2-202ENST00000544223 ABCB5Q2M3G0 1257 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 STAMQ92783 540 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 JMJD4Q9H9V9 463 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 BRMS1Q9HCU9 246 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.66■□□□□ 0.1
HCFC2-202ENST00000544223 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.66■□□□□ 0.1
HCFC2-202ENST00000544223 KCNH3Q9ULD8 1083 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 PCDHA4Q9UN74 947 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 PSME4Q14997 1843 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 SMCO2A6NFE2 343 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 ICA1Q05084 483 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 KIAA1755Q5JYT7 1200 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 CIAPIN1Q6FI81 312 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 ACER1Q8TDN7 264 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 ANP32BQ92688 251 aaKnown RBP15.66■□□□□ 0.1
HCFC2-202ENST00000544223 RRP36Q96EU6 259 aaKnown RBP15.66■□□□□ 0.1
HCFC2-202ENST00000544223 EHD4Q9H223 541 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 FER1L6Q2WGJ9 1857 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 PLIN4Q96Q06 1357 aa15.66■□□□□ 0.1
HCFC2-202ENST00000544223 GNAQP50148 359 aa15.65■□□□□ 0.1
HCFC2-202ENST00000544223 ZNF543Q08ER8 600 aa15.65■□□□□ 0.1
HCFC2-202ENST00000544223 DGKZQ13574 1117 aa15.65■□□□□ 0.1
HCFC2-202ENST00000544223 DPCR1Q3MIW9 517 aa15.65■□□□□ 0.1
HCFC2-202ENST00000544223 TATDN1Q6P1N9 297 aa15.65■□□□□ 0.1
HCFC2-202ENST00000544223 GLIS2Q9BZE0 524 aaPredicted RBP15.65■□□□□ 0.1
HCFC2-202ENST00000544223 SEC63Q9UGP8 760 aaKnown RBP15.65■□□□□ 0.1
HCFC2-202ENST00000544223 HPSEQ9Y251 543 aa15.65■□□□□ 0.1
HCFC2-202ENST00000544223 CENPFP49454 3210 aa15.65■□□□□ 0.1
HCFC2-202ENST00000544223 PP2D1A8MPX8 630 aa15.65■□□□□ 0.1
HCFC2-202ENST00000544223 PTPREP23469 700 aa15.65■□□□□ 0.1
HCFC2-202ENST00000544223 ZNF165P49910 485 aa15.65■□□□□ 0.1
HCFC2-202ENST00000544223 UBE2SQ16763 222 aa15.65■□□□□ 0.1
HCFC2-202ENST00000544223 FOXP4Q8IVH2 680 aaPredicted RBP15.65■□□□□ 0.1
HCFC2-202ENST00000544223 SPZ1Q9BXG8 430 aa15.65■□□□□ 0.1
HCFC2-202ENST00000544223 MYOZ2Q9NPC6 264 aa15.65■□□□□ 0.1
HCFC2-202ENST00000544223 HDAC9Q9UKV0 1011 aa15.65■□□□□ 0.1
HCFC2-202ENST00000544223 M0R2N6 131 aa15.64■□□□□ 0.09
HCFC2-202ENST00000544223 ADCY5O95622 1261 aa15.64■□□□□ 0.09
HCFC2-202ENST00000544223 PRR29P0C7W0 189 aa15.64■□□□□ 0.09
HCFC2-202ENST00000544223 SPDYE2Q495Y8 402 aa15.64■□□□□ 0.09
HCFC2-202ENST00000544223 DLK2Q6UY11 383 aa15.64■□□□□ 0.09
HCFC2-202ENST00000544223 JMYQ8N9B5 988 aa15.64■□□□□ 0.09
HCFC2-202ENST00000544223 TMEM60Q9H2L4 133 aa15.64■□□□□ 0.09
HCFC2-202ENST00000544223 TMOD2Q9NZR1 351 aa15.64■□□□□ 0.09
HCFC2-202ENST00000544223 CUTAO60888 179 aa15.64■□□□□ 0.09
HCFC2-202ENST00000544223 SNHG28P0DPA3 235 aa15.64■□□□□ 0.09
HCFC2-202ENST00000544223 SLC1A4P43007 532 aa15.64■□□□□ 0.09
HCFC2-202ENST00000544223 METTL16Q86W50 562 aaKnown RBP15.64■□□□□ 0.09
HCFC2-202ENST00000544223 GJA10Q969M2 543 aa15.64■□□□□ 0.09
HCFC2-202ENST00000544223 ZNF830Q96NB3 372 aaPredicted RBP15.64■□□□□ 0.09
HCFC2-202ENST00000544223 PLIN2Q99541 437 aa15.64■□□□□ 0.09
HCFC2-202ENST00000544223 RRAGDQ9NQL2 400 aaPredicted RBP15.64■□□□□ 0.09
HCFC2-202ENST00000544223 SERTAD1Q9UHV2 236 aa15.64■□□□□ 0.09
HCFC2-202ENST00000544223 CCDC194A0A1B0GVG4 234 aa15.63■□□□□ 0.09
HCFC2-202ENST00000544223 GMPSP49915 693 aaPredicted RBP15.63■□□□□ 0.09
HCFC2-202ENST00000544223 CCDC173Q0VFZ6 552 aa15.63■□□□□ 0.09
HCFC2-202ENST00000544223 ZRSR1Q15695 479 aaKnown RBP15.63■□□□□ 0.09
HCFC2-202ENST00000544223 SLFN13Q68D06 897 aa15.63■□□□□ 0.09
HCFC2-202ENST00000544223 SYMPKQ92797 1274 aaKnown RBP15.63■□□□□ 0.09
HCFC2-202ENST00000544223 RIOX1Q9H6W3 641 aa15.63■□□□□ 0.09
HCFC2-202ENST00000544223 KIAA1468Q9P260 1216 aa15.63■□□□□ 0.09
HCFC2-202ENST00000544223 GREB1LQ9C091 1923 aaPredicted RBP15.63■□□□□ 0.09
HCFC2-202ENST00000544223 ZNF541Q9H0D2 1346 aa15.63■□□□□ 0.09
HCFC2-202ENST00000544223 F5H6K3 240 aa15.63■□□□□ 0.09
HCFC2-202ENST00000544223 KLRC3Q07444 240 aa15.63■□□□□ 0.09
HCFC2-202ENST00000544223 IKQ13123 557 aaPredicted RBP15.63■□□□□ 0.09
HCFC2-202ENST00000544223 LETM2Q2VYF4 491 aa15.63■□□□□ 0.09
HCFC2-202ENST00000544223 MICALL2Q8IY33 904 aa15.63■□□□□ 0.09
HCFC2-202ENST00000544223 FAM200AQ8TCP9 573 aa15.63■□□□□ 0.09
HCFC2-202ENST00000544223 PPP1R9BQ96SB3 815 aa15.63■□□□□ 0.09
HCFC2-202ENST00000544223 SRPRBQ9Y5M8 271 aaKnown RBP15.63■□□□□ 0.09
HCFC2-202ENST00000544223 ENTPD3O75355 529 aa15.62■□□□□ 0.09
HCFC2-202ENST00000544223 SPC24Q8NBT2 197 aa15.62■□□□□ 0.09
HCFC2-202ENST00000544223 CNNM3Q8NE01 707 aa15.62■□□□□ 0.09
HCFC2-202ENST00000544223 DHX58Q96C10 678 aa15.62■□□□□ 0.09
HCFC2-202ENST00000544223 TRIM44Q96DX7 344 aaPredicted RBP15.62■□□□□ 0.09
HCFC2-202ENST00000544223 AFMP43652 599 aa15.62■□□□□ 0.09
HCFC2-202ENST00000544223 USH1GQ495M9 461 aa15.62■□□□□ 0.09
HCFC2-202ENST00000544223 KANSL2Q9H9L4 492 aa15.62■□□□□ 0.09
HCFC2-202ENST00000544223 NOL7Q9UMY1 257 aaKnown RBP15.62■□□□□ 0.09
HCFC2-202ENST00000544223 MYO3BQ8WXR4 1341 aa15.62■□□□□ 0.09
HCFC2-202ENST00000544223 NDUFB10O96000 172 aa15.61■□□□□ 0.09
HCFC2-202ENST00000544223 RASA3Q14644 834 aa15.61■□□□□ 0.09
HCFC2-202ENST00000544223 FAM151AQ8WW52 585 aa15.61■□□□□ 0.09
HCFC2-202ENST00000544223 CCDC17Q96LX7 622 aa15.61■□□□□ 0.09
HCFC2-202ENST00000544223 ZMYND12Q9H0C1 365 aa15.61■□□□□ 0.09
HCFC2-202ENST00000544223 ATRNL1Q5VV63 1379 aa15.61■□□□□ 0.09
HCFC2-202ENST00000544223 CCNT1O60563 726 aaKnown RBP15.61■□□□□ 0.09
HCFC2-202ENST00000544223 CALML3P27482 149 aa15.61■□□□□ 0.09
HCFC2-202ENST00000544223 ASPRV1Q53RT3 343 aa15.61■□□□□ 0.09
HCFC2-202ENST00000544223 SOGA3Q5TF21 947 aa15.61■□□□□ 0.09
HCFC2-202ENST00000544223 KRBA2Q6ZNG9 492 aa15.61■□□□□ 0.09
HCFC2-202ENST00000544223 ARHGAP27Q6ZUM4 889 aa15.61■□□□□ 0.09
HCFC2-202ENST00000544223 TMEM179Q6ZVK1 233 aa15.61■□□□□ 0.09
HCFC2-202ENST00000544223 RGS22Q8NE09 1264 aa15.61■□□□□ 0.09
HCFC2-202ENST00000544223 AGBL3Q8NEM8 1001 aa15.61■□□□□ 0.09
HCFC2-202ENST00000544223 PDLIM2Q96JY6 352 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms