RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ITGA4P13612 1032 aa5.26□□□□□ -1.57
SCFD1-207ENST00000544052 RNF4P78317 190 aa5.26□□□□□ -1.57
SCFD1-207ENST00000544052 NSMFQ6X4W1 530 aa5.26□□□□□ -1.57
SCFD1-207ENST00000544052 TMC3Q7Z5M5 1100 aa5.26□□□□□ -1.57
SCFD1-207ENST00000544052 RPUSD2Q8IZ73 545 aaKnown RBP5.26□□□□□ -1.57
SCFD1-207ENST00000544052 ARHGEF39Q8N4T4 335 aa5.26□□□□□ -1.57
SCFD1-207ENST00000544052 OSBP2Q969R2 916 aa5.26□□□□□ -1.57
SCFD1-207ENST00000544052 RCC1LQ96I51 464 aaKnown RBP5.26□□□□□ -1.57
SCFD1-207ENST00000544052 ASPNQ9BXN1 380 aa5.26□□□□□ -1.57
SCFD1-207ENST00000544052 FAM126AQ9BYI3 521 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-207ENST00000544052 GFOD1Q9NXC2 390 aa5.26□□□□□ -1.57
SCFD1-207ENST00000544052 PLAAQ9Y263 795 aa5.26□□□□□ -1.57
SCFD1-207ENST00000544052 ZCCHC6Q5VYS8 1495 aaKnown RBP5.26□□□□□ -1.57
SCFD1-207ENST00000544052 MEIS1O00470 390 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 VAMP4O75379 141 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 MYCLP1P12525 358 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-207ENST00000544052 UVSSAQ2YD98 709 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 TM4SF20Q53R12 229 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 ZC3H12BQ5HYM0 836 aaKnown RBP5.25□□□□□ -1.57
SCFD1-207ENST00000544052 BEND4Q6ZU67 534 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 SCUBE1Q8IWY4 988 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 SHISA5Q8N114 240 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 FIBCD1Q8N539 461 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 Q96M66 194 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 IPO9Q96P70 1041 aaKnown RBP5.25□□□□□ -1.57
SCFD1-207ENST00000544052 A0A087X0B3 334 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 BLACEA4D250 179 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 PRR33A8MZF0 331 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 CBX7O95931 251 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 FAM87AP0C7U9 286 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 FGFR1P11362 822 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 TAF7LQ5H9L4 462 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 TXNRD3Q86VQ6 643 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 TRIM59Q8IWR1 403 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 UBR7Q8N806 425 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 ZDHHC15Q96MV8 337 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 BRINP2Q9C0B6 783 aa5.25□□□□□ -1.57
SCFD1-207ENST00000544052 CCDC163A0A0D9SF12 145 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 SHISA3A0PJX4 238 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 DLX3O60479 287 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 ADMP35318 185 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 PRSS53Q2L4Q9 553 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 GTF2IRD2BQ6EKJ0 949 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 GTF2IRD2Q86UP8 949 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 THNSL2Q86YJ6 484 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 MFSD3Q96ES6 412 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 HEXIM2Q96MH2 286 aaKnown RBP5.24□□□□□ -1.57
SCFD1-207ENST00000544052 GPR55Q9Y2T6 319 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-207ENST00000544052 HMX2A2RU54 273 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 PLD2O14939 933 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 VIL1P09327 827 aaKnown RBP5.24□□□□□ -1.57
SCFD1-207ENST00000544052 C6orf222P0C671 652 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-207ENST00000544052 SDSP20132 328 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 POMZP3Q6PJE2 187 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 FAM214BQ7L5A3 538 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 JAMLQ86YT9 394 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 DTWD2Q8NBA8 298 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 SYTL5Q8TDW5 730 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-207ENST00000544052 FHOD1Q9Y613 1164 aa5.24□□□□□ -1.57
SCFD1-207ENST00000544052 H0Y8X5 98 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 PDE8AO60658 829 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 PRAMEF1O95521 474 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 H2AFB1P0C5Y9 115 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 H2AFB2P0C5Z0 115 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 CYP4F3Q08477 520 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 DPY19L1Q2PZI1 675 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 PRSS36Q5K4E3 855 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 ARTNQ5T4W7 220 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 PAOXQ6QHF9 649 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 STAG1Q8WVM7 1258 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 GATA6Q92908 595 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 TBC1D32Q96NH3 1257 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 DSCC1Q9BVC3 393 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 ZFP64Q9NPA5 681 aa5.23□□□□□ -1.57
SCFD1-207ENST00000544052 PRDM5Q9NQX1 630 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-207ENST00000544052 A0A087WZG4 1122 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 DHX15O43143 795 aaKnown RBP5.22□□□□□ -1.57
SCFD1-207ENST00000544052 RFPL3O75679 317 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 CYP7A1P22680 504 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 CNGA1P29973 690 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 GFRA1P56159 465 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 EVA1CP58658 441 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 SUMO1P63165 101 aaKnown RBP5.22□□□□□ -1.57
SCFD1-207ENST00000544052 FNDC3BQ53EP0 1204 aaKnown RBP5.22□□□□□ -1.57
SCFD1-207ENST00000544052 SFRP5Q5T4F7 317 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 TMEM145Q8NBT3 493 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 SLC7A14Q8TBB6 771 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 MCMBPQ9BTE3 642 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 TARS2Q9BW92 718 aaKnown RBP5.22□□□□□ -1.57
SCFD1-207ENST00000544052 SLC52A2Q9HAB3 445 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 DIS3Q9Y2L1 958 aaKnown RBP5.22□□□□□ -1.57
SCFD1-207ENST00000544052 SIGLEC6O43699 453 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 POU3F3P20264 500 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-207ENST00000544052 STAT3P40763 770 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 ECI1P42126 302 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 CTSKP43235 329 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 KCNJ6P48051 423 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 TNK2Q07912 1038 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 NMIQ13287 307 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-207ENST00000544052 NTRK3Q16288 839 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms