RNA–Protein interactions for RNA: ENST00000543938.5

AP3B2-210, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 2,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-210ENST00000543938 FLOT1O75955 427 aa14.06□□□□□ -0.16
AP3B2-210ENST00000543938 TROVE2P10155 538 aaKnown RBP eCLIP14.06□□□□□ -0.16
AP3B2-210ENST00000543938 TUBP50607 506 aa14.06□□□□□ -0.16
AP3B2-210ENST00000543938 USP14P54578 494 aa14.06□□□□□ -0.16
AP3B2-210ENST00000543938 ATL3Q6DD88 541 aa14.06□□□□□ -0.16
AP3B2-210ENST00000543938 KDM7AQ6ZMT4 941 aa14.06□□□□□ -0.16
AP3B2-210ENST00000543938 PIAS4Q8N2W9 510 aaPredicted RBP14.06□□□□□ -0.16
AP3B2-210ENST00000543938 USP33Q8TEY7 942 aa14.06□□□□□ -0.16
AP3B2-210ENST00000543938 SYT15Q9BQS2 421 aa14.06□□□□□ -0.16
AP3B2-210ENST00000543938 ESYT1Q9BSJ8 1104 aa14.06□□□□□ -0.16
AP3B2-210ENST00000543938 SELENOOQ9BVL4 669 aa14.06□□□□□ -0.16
AP3B2-210ENST00000543938 EXOC1Q9NV70 894 aa14.06□□□□□ -0.16
AP3B2-210ENST00000543938 EFR3BQ9Y2G0 817 aa14.06□□□□□ -0.16
AP3B2-210ENST00000543938 NDUFB5O43674 189 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 MLH1P40692 756 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 NLRP5P59047 1200 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 CLEC4GQ6UXB4 293 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 IFT43Q96FT9 208 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 PGBD1Q96JS3 809 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 NR1H4Q96RI1 486 aaPredicted RBP14.05□□□□□ -0.16
AP3B2-210ENST00000543938 SH3GL1Q99961 368 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 TCHPQ9BT92 498 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 TAOK3Q9H2K8 898 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 VCX3BQ9H321 246 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 VCX3AQ9NNX9 186 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 VPS37CA5D8V6 355 aaPredicted RBP14.05□□□□□ -0.16
AP3B2-210ENST00000543938 TRIM43BA6NCK2 446 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 PPIP5K2O43314 1243 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 STX10O60499 249 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 USO1O60763 962 aaKnown RBP14.05□□□□□ -0.16
AP3B2-210ENST00000543938 KIF5AQ12840 1032 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 ZNF268Q14587 947 aaPredicted RBP14.05□□□□□ -0.16
AP3B2-210ENST00000543938 FXNQ16595 210 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 SH2D4BQ5SQS7 431 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 CEP128Q6ZU80 1094 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 CYFIP2Q96F07 1278 aa14.05□□□□□ -0.16
AP3B2-210ENST00000543938 DDX21Q9NR30 783 aaKnown RBP eCLIP14.05□□□□□ -0.16
AP3B2-210ENST00000543938 ARHGEF28Q8N1W1 1705 aaKnown RBP14.04□□□□□ -0.16
AP3B2-210ENST00000543938 HOXD10P28358 340 aa14.04□□□□□ -0.16
AP3B2-210ENST00000543938 PPP1R7Q15435 360 aa14.04□□□□□ -0.16
AP3B2-210ENST00000543938 CATIPQ7Z7H3 387 aa14.04□□□□□ -0.16
AP3B2-210ENST00000543938 LMNTD2Q8IXW0 634 aa14.04□□□□□ -0.16
AP3B2-210ENST00000543938 DDX12PQ92771 950 aa14.04□□□□□ -0.16
AP3B2-210ENST00000543938 R3HDM2Q9Y2K5 976 aaKnown RBP14.04□□□□□ -0.16
AP3B2-210ENST00000543938 MST1RQ04912 1400 aa14.04□□□□□ -0.16
AP3B2-210ENST00000543938 SUPT3HO75486 399 aa14.04□□□□□ -0.16
AP3B2-210ENST00000543938 ARPC4P59998 168 aa14.04□□□□□ -0.16
AP3B2-210ENST00000543938 TAF11Q15544 211 aa14.04□□□□□ -0.16
AP3B2-210ENST00000543938 CMPK2Q5EBM0 449 aa14.04□□□□□ -0.16
AP3B2-210ENST00000543938 LRRC43Q8N309 656 aa14.04□□□□□ -0.16
AP3B2-210ENST00000543938 SLC43A3Q8NBI5 491 aa14.04□□□□□ -0.16
AP3B2-210ENST00000543938 DDX27Q96GQ7 796 aaKnown RBP14.04□□□□□ -0.16
AP3B2-210ENST00000543938 SNX27Q96L92 541 aa14.04□□□□□ -0.16
AP3B2-210ENST00000543938 MAK16Q9BXY0 300 aaKnown RBP14.04□□□□□ -0.16
AP3B2-210ENST00000543938 PDGFRBP09619 1106 aa14.03□□□□□ -0.16
AP3B2-210ENST00000543938 USP46P62068 366 aa14.03□□□□□ -0.16
AP3B2-210ENST00000543938 SULT2A1Q06520 285 aa14.03□□□□□ -0.16
AP3B2-210ENST00000543938 TSR1Q2NL82 804 aaKnown RBP14.03□□□□□ -0.16
AP3B2-210ENST00000543938 GJC2Q5T442 439 aaPredicted RBP14.03□□□□□ -0.16
AP3B2-210ENST00000543938 TOGARAM2Q6ZUX3 1019 aa14.03□□□□□ -0.16
AP3B2-210ENST00000543938 LINS1Q8NG48 757 aa14.03□□□□□ -0.16
AP3B2-210ENST00000543938 PUS3Q9BZE2 481 aaKnown RBP14.03□□□□□ -0.16
AP3B2-210ENST00000543938 ROBO1Q9Y6N7 1651 aa14.03□□□□□ -0.16
AP3B2-210ENST00000543938 AKR1B10O60218 316 aa14.03□□□□□ -0.16
AP3B2-210ENST00000543938 STK10O94804 968 aaKnown RBP14.03□□□□□ -0.16
AP3B2-210ENST00000543938 GSTM4Q03013 218 aa14.03□□□□□ -0.16
AP3B2-210ENST00000543938 TTMPQ5BVD1 217 aa14.03□□□□□ -0.16
AP3B2-210ENST00000543938 TMEM53Q6P2H8 277 aa14.03□□□□□ -0.16
AP3B2-210ENST00000543938 OTUD7AQ8TE49 926 aaPredicted RBP14.03□□□□□ -0.16
AP3B2-210ENST00000543938 MAML3Q96JK9 1138 aa14.03□□□□□ -0.16
AP3B2-210ENST00000543938 CCDC85AQ96PX6 553 aaPredicted RBP14.03□□□□□ -0.16
AP3B2-210ENST00000543938 NRDE2Q9H7Z3 1164 aa14.03□□□□□ -0.16
AP3B2-210ENST00000543938 DAAM1Q9Y4D1 1078 aa14.03□□□□□ -0.16
AP3B2-210ENST00000543938 ADGRB2O60241 1585 aa14.03□□□□□ -0.16
AP3B2-210ENST00000543938 CTAGE9A4FU28 777 aa14.02□□□□□ -0.16
AP3B2-210ENST00000543938 HTR3EA5X5Y0 456 aa14.02□□□□□ -0.16
AP3B2-210ENST00000543938 SP100P23497 879 aaPredicted RBP14.02□□□□□ -0.16
AP3B2-210ENST00000543938 AKAP17AQ02040 695 aaKnown RBP14.02□□□□□ -0.16
AP3B2-210ENST00000543938 RNPC3Q96LT9 517 aaKnown RBP14.02□□□□□ -0.16
AP3B2-210ENST00000543938 CENPOQ9BU64 300 aa14.02□□□□□ -0.16
AP3B2-210ENST00000543938 TIMM22Q9Y584 194 aa14.02□□□□□ -0.16
AP3B2-210ENST00000543938 CFAP73A6NFT4 308 aa14.02□□□□□ -0.17
AP3B2-210ENST00000543938 TCF7P36402 384 aaPredicted RBP14.02□□□□□ -0.17
AP3B2-210ENST00000543938 SEC24CP53992 1094 aa14.02□□□□□ -0.17
AP3B2-210ENST00000543938 KARSQ15046 597 aaKnown RBP14.02□□□□□ -0.17
AP3B2-210ENST00000543938 NAA16Q6N069 864 aaPredicted RBP14.02□□□□□ -0.17
AP3B2-210ENST00000543938 RUFY3Q7L099 469 aa14.02□□□□□ -0.17
AP3B2-210ENST00000543938 ZNF554Q86TJ5 538 aa14.02□□□□□ -0.17
AP3B2-210ENST00000543938 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.02□□□□□ -0.17
AP3B2-210ENST00000543938 DEPTORQ8TB45 409 aa14.02□□□□□ -0.17
AP3B2-210ENST00000543938 ATRIPQ8WXE1 791 aa14.02□□□□□ -0.17
AP3B2-210ENST00000543938 CCT6BQ92526 530 aa14.02□□□□□ -0.17
AP3B2-210ENST00000543938 ABHD8Q96I13 439 aa14.02□□□□□ -0.17
AP3B2-210ENST00000543938 INIPQ9NRY2 104 aa14.02□□□□□ -0.17
AP3B2-210ENST00000543938 PANK4Q9NVE7 773 aa14.02□□□□□ -0.17
AP3B2-210ENST00000543938 MKS1Q9NXB0 559 aa14.02□□□□□ -0.17
AP3B2-210ENST00000543938 SLC4A7Q9Y6M7 1214 aa14.02□□□□□ -0.17
AP3B2-210ENST00000543938 LDHAP00338 332 aaKnown RBP14.01□□□□□ -0.17
AP3B2-210ENST00000543938 MAP3K12Q12852 859 aa14.01□□□□□ -0.17
AP3B2-210ENST00000543938 ALDH1L2Q3SY69 923 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms