RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 LIFRP42702 1097 aa17.65■□□□□ 0.42
CD9-210ENST00000543916 TROAPQ12815 778 aa17.65■□□□□ 0.42
CD9-210ENST00000543916 CTU1Q7Z7A3 348 aaKnown RBP17.65■□□□□ 0.42
CD9-210ENST00000543916 ZNF654Q8IZM8 581 aa17.65■□□□□ 0.42
CD9-210ENST00000543916 MYL10Q9BUA6 226 aa17.65■□□□□ 0.42
CD9-210ENST00000543916 SPATC1LQ9H0A9 340 aa17.65■□□□□ 0.42
CD9-210ENST00000543916 CPVLQ9H3G5 476 aa17.65■□□□□ 0.42
CD9-210ENST00000543916 EFCC1Q9HA90 598 aa17.65■□□□□ 0.42
CD9-210ENST00000543916 SLC38A10Q9HBR0 1119 aa17.65■□□□□ 0.42
CD9-210ENST00000543916 ZNF214Q9UL59 606 aaPredicted RBP17.65■□□□□ 0.42
CD9-210ENST00000543916 PRR12Q9ULL5 1215 aa17.65■□□□□ 0.42
CD9-210ENST00000543916 TRIM17Q9Y577 477 aa17.65■□□□□ 0.42
CD9-210ENST00000543916 FMNL1O95466 1100 aaPredicted RBP17.64■□□□□ 0.41
CD9-210ENST00000543916 PSMA5P28066 241 aa17.64■□□□□ 0.41
CD9-210ENST00000543916 FCGRTP55899 365 aa17.64■□□□□ 0.41
CD9-210ENST00000543916 SNAP25P60880 206 aa17.64■□□□□ 0.41
CD9-210ENST00000543916 PLS1Q14651 629 aa17.64■□□□□ 0.41
CD9-210ENST00000543916 ASPRV1Q53RT3 343 aa17.64■□□□□ 0.41
CD9-210ENST00000543916 GPATCH4Q5T3I0 446 aaKnown RBP17.64■□□□□ 0.41
CD9-210ENST00000543916 SYDE2Q5VT97 1194 aa17.64■□□□□ 0.41
CD9-210ENST00000543916 NFXL1Q6ZNB6 911 aa17.64■□□□□ 0.41
CD9-210ENST00000543916 CATIPQ7Z7H3 387 aa17.64■□□□□ 0.41
CD9-210ENST00000543916 STAG2Q8N3U4 1231 aa17.64■□□□□ 0.41
CD9-210ENST00000543916 MOV10L1Q9BXT6 1211 aaKnown RBP17.64■□□□□ 0.41
CD9-210ENST00000543916 TM6SF1Q9BZW5 370 aa17.64■□□□□ 0.41
CD9-210ENST00000543916 ZSWIM6Q9HCJ5 1215 aa17.64■□□□□ 0.41
CD9-210ENST00000543916 MAD2L2Q9UI95 211 aa17.64■□□□□ 0.41
CD9-210ENST00000543916 ZNF236Q9UL36 1845 aa17.63■□□□□ 0.41
CD9-210ENST00000543916 CCDC69A6NI79 296 aa17.63■□□□□ 0.41
CD9-210ENST00000543916 ZBED4O75132 1171 aa17.63■□□□□ 0.41
CD9-210ENST00000543916 PARP1P09874 1014 aaKnown RBP17.63■□□□□ 0.41
CD9-210ENST00000543916 ANAPC15P60006 121 aa17.63■□□□□ 0.41
CD9-210ENST00000543916 GRM4Q14833 912 aa17.63■□□□□ 0.41
CD9-210ENST00000543916 RUFY3Q7L099 469 aa17.63■□□□□ 0.41
CD9-210ENST00000543916 SGMS1Q86VZ5 419 aa17.63■□□□□ 0.41
CD9-210ENST00000543916 TMTC2Q8N394 836 aa17.63■□□□□ 0.41
CD9-210ENST00000543916 UBA5Q9GZZ9 404 aa17.63■□□□□ 0.41
CD9-210ENST00000543916 PALM3A6NDB9 673 aaPredicted RBP17.62■□□□□ 0.41
CD9-210ENST00000543916 TNPO2O14787 897 aaKnown RBP17.62■□□□□ 0.41
CD9-210ENST00000543916 DDAH1O94760 285 aa17.62■□□□□ 0.41
CD9-210ENST00000543916 MAPK4P31152 587 aa17.62■□□□□ 0.41
CD9-210ENST00000543916 CCNA1P78396 465 aa17.62■□□□□ 0.41
CD9-210ENST00000543916 Q6ZUG5 572 aa17.62■□□□□ 0.41
CD9-210ENST00000543916 RAB11FIP4Q86YS3 637 aa17.62■□□□□ 0.41
CD9-210ENST00000543916 IL17RAQ96F46 866 aa17.62■□□□□ 0.41
CD9-210ENST00000543916 UPF3BQ9BZI7 483 aaKnown RBP17.62■□□□□ 0.41
CD9-210ENST00000543916 RANBP17Q9H2T7 1088 aaKnown RBP17.62■□□□□ 0.41
CD9-210ENST00000543916 RAVER2Q9HCJ3 691 aaKnown RBP17.62■□□□□ 0.41
CD9-210ENST00000543916 BRPF3Q9ULD4 1205 aa17.62■□□□□ 0.41
CD9-210ENST00000543916 GABRQQ9UN88 632 aa17.62■□□□□ 0.41
CD9-210ENST00000543916 ZNF536O15090 1300 aa17.62■□□□□ 0.41
CD9-210ENST00000543916 DOCK3Q8IZD9 2030 aa17.62■□□□□ 0.41
CD9-210ENST00000543916 MYH6P13533 1939 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 ATP2A1O14983 1001 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 FDX1P10109 184 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 ERCC3P19447 782 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 RXRAP19793 462 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 STAT3P40763 770 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 ARHGEF6Q15052 776 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 SNRNP48Q6IEG0 339 aaKnown RBP17.61■□□□□ 0.41
CD9-210ENST00000543916 APOA5Q6Q788 366 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 GPR142Q7Z601 462 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 RIOX2Q8IUF8 465 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 CPXCR1Q8N123 301 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 SHCBP1Q8NEM2 672 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 NUP133Q8WUM0 1156 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 MAP3K14Q99558 947 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 TEX13BQ9BXU2 312 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 AGXT2Q9BYV1 514 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 SRRDQ9UH36 339 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 CTDP1Q9Y5B0 961 aaPredicted RBP17.61■□□□□ 0.41
CD9-210ENST00000543916 CYP46A1Q9Y6A2 500 aa17.61■□□□□ 0.41
CD9-210ENST00000543916 KLRF2D3W0D1 207 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 GNRH1P01148 92 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 OAZ1P54368 228 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 PRKCZQ05513 592 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 SLC35G1Q2M3R5 365 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 WDR78Q5VTH9 848 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 CCDC174Q6PII3 467 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 PLEKHH3Q7Z736 793 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 NCAPG2Q86XI2 1143 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 CCAR1Q8IX12 1150 aaKnown RBP17.6■□□□□ 0.41
CD9-210ENST00000543916 ADGRF4Q8IZF3 695 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 FBXL16Q8N461 479 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 BRF1Q92994 677 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 COA7Q96BR5 231 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 AGBL1Q96MI9 1066 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 MCOLN1Q9GZU1 580 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 PTPN22Q9Y2R2 807 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 RIPK3Q9Y572 518 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 SLC12A7Q9Y666 1083 aa17.6■□□□□ 0.41
CD9-210ENST00000543916 SMCHD1A6NHR9 2005 aa17.59■□□□□ 0.41
CD9-210ENST00000543916 RBBP6Q7Z6E9 1792 aaKnown RBP17.59■□□□□ 0.41
CD9-210ENST00000543916 KLF18A0A0U1RQI7 1052 aa17.59■□□□□ 0.41
CD9-210ENST00000543916 SLC25A27O95847 323 aa17.59■□□□□ 0.41
CD9-210ENST00000543916 TAL1P17542 331 aaPredicted RBP17.59■□□□□ 0.41
CD9-210ENST00000543916 SLC4A3P48751 1232 aa17.59■□□□□ 0.41
CD9-210ENST00000543916 FGD1P98174 961 aa17.59■□□□□ 0.41
CD9-210ENST00000543916 APOBRQ0VD83 1088 aa17.59■□□□□ 0.41
CD9-210ENST00000543916 TOB2Q14106 344 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms