RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 CCT6AP40227 531 aaKnown RBP5.56□□□□□ -1.52
LMO3-229ENST00000543721 HAND2P61296 217 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 ZBED6P86452 979 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 ICA1Q05084 483 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 PDIA6Q15084 440 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 NTRK3Q16288 839 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 ZNF658Q5TYW1 1059 aaPredicted RBP5.56□□□□□ -1.52
LMO3-229ENST00000543721 C8orf74Q6P047 294 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 C6orf89Q6UWU4 347 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 MPRIPQ6WCQ1 1025 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 MYCBPAPQ8TBZ2 947 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 CCDC47Q96A33 483 aaKnown RBP5.56□□□□□ -1.52
LMO3-229ENST00000543721 ATP6V1G3Q96LB4 118 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 CSRNP2Q9H175 543 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 VPS16Q9H269 839 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 CENPHQ9H3R5 247 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 THAP9Q9H5L6 903 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 LUC7LQ9NQ29 371 aaKnown RBP5.56□□□□□ -1.52
LMO3-229ENST00000543721 GJB4Q9NTQ9 266 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 CTNND2Q9UQB3 1225 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 ADAMTS13Q76LX8 1427 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 A0A0U1RQJ8 604 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 ENC1O14682 589 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 NEBLO76041 1014 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 MYL1P05976 194 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 MYH8P13535 1937 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 HERVK_113P62684 666 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 LMNB2Q03252 620 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 BIRC3Q13489 604 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 ALX1Q15699 326 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 LACTB2Q53H82 288 aaPredicted RBP5.56□□□□□ -1.52
LMO3-229ENST00000543721 FIGNQ5HY92 759 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 TMEM67Q5HYA8 995 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 LMBR1LQ6UX01 489 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 UBN2Q6ZU65 1347 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 COPS6Q7L5N1 327 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 IQCKQ8N0W5 287 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 MAB21L3Q8N8X9 362 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 ARMC2Q8NEN0 867 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 SPATA4Q8NEY3 305 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 ATRIPQ8WXE1 791 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 MOV10L1Q9BXT6 1211 aaKnown RBP5.56□□□□□ -1.52
LMO3-229ENST00000543721 KRT23Q9C075 422 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 SWAP70Q9UH65 585 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 REXO2Q9Y3B8 237 aaKnown RBP5.56□□□□□ -1.52
LMO3-229ENST00000543721 NDUFB9Q9Y6M9 179 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 BCL9LQ86UU0 1499 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 A0A1W2PQJ5 194 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 ERICH2A1L162 156 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 GMNCA6NCL1 334 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 NUTM2BA6NNL0 878 aaPredicted RBP5.56□□□□□ -1.52
LMO3-229ENST00000543721 NUTM2EB1AL46 878 aaPredicted RBP5.56□□□□□ -1.52
LMO3-229ENST00000543721 BTBD18B2RXH4 712 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 AFMP43652 599 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 C2orf54Q08AI8 447 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 C11orf91Q3C1V1 193 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 CFAP221Q4G0U5 840 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 CYB5D1Q6P9G0 228 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 CRELD2Q6UXH1 353 aaPredicted RBP5.56□□□□□ -1.52
LMO3-229ENST00000543721 MICU3Q86XE3 530 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 CEP57Q86XR8 500 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 TCP11Q8WWU5 503 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 NELFBQ8WX92 580 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 LRRC45Q96CN5 670 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 AIFM3Q96NN9 605 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 CHP1Q99653 195 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 CD248Q9HCU0 757 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 HOMER3Q9NSC5 361 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 TAB2Q9NYJ8 693 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 HDAC6Q9UBN7 1215 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 TTC26A0AVF1 554 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 GRID2IPA4D2P6 1211 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 DNAJC8O75937 253 aaPredicted RBP5.55□□□□□ -1.52
LMO3-229ENST00000543721 PARP1P09874 1014 aaKnown RBP5.55□□□□□ -1.52
LMO3-229ENST00000543721 CD44P16070 742 aaKnown RBP5.55□□□□□ -1.52
LMO3-229ENST00000543721 HOXA7P31268 230 aaPredicted RBP5.55□□□□□ -1.52
LMO3-229ENST00000543721 TOB1P50616 345 aaPredicted RBP5.55□□□□□ -1.52
LMO3-229ENST00000543721 IFT88Q13099 833 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 TTMPQ5BVD1 217 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 CREG2Q8IUH2 290 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 CACNA2D3Q8IZS8 1091 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 FUKQ8N0W3 1084 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 PLBD2Q8NHP8 589 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 PHKBQ93100 1093 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 ARL8AQ96BM9 186 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 CCDC42Q96M95 316 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 GDAP1L1Q96MZ0 367 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 ZIM3Q96PE6 472 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 KDM4CQ9H3R0 1056 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 SPATS2LQ9NUQ6 558 aaKnown RBP5.55□□□□□ -1.52
LMO3-229ENST00000543721 PARP4Q9UKK3 1724 aaKnown RBP5.55□□□□□ -1.52
LMO3-229ENST00000543721 TNRQ92752 1358 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 GOLGA6L10A0A0M3HER8 536 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 E7EVH7 732 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 H7C1W4 665 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 PSMA7O14818 248 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 GPAA1O43292 621 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 GSTA1P08263 222 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 MYBL2P10244 700 aa5.55□□□□□ -1.52
LMO3-229ENST00000543721 SSR1P43307 286 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms