RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 NUP88Q99567 741 aaPredicted RBP8.48□□□□□ -1.05
NUP43-206ENST00000543637 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.48□□□□□ -1.05
NUP43-206ENST00000543637 TEX13BQ9BXU2 312 aa8.48□□□□□ -1.05
NUP43-206ENST00000543637 STX8Q9UNK0 236 aa8.48□□□□□ -1.05
NUP43-206ENST00000543637 CNPY2Q9Y2B0 182 aa8.48□□□□□ -1.05
NUP43-206ENST00000543637 IGKV6D-41A0A0C4DH26 115 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 A0A1W2PPC1 479 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 TMEM232C9JQI7 657 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 DNM1LO00429 736 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 NDUFB10O96000 172 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 CYBAP13498 195 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 SLC1A4P43007 532 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 STAT2P52630 851 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 ALX1Q15699 326 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 RRP12Q5JTH9 1297 aaKnown RBP8.47□□□□□ -1.05
NUP43-206ENST00000543637 RCSD1Q6JBY9 416 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 CCDC129Q6ZRS4 1044 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 MFSD6Q6ZSS7 791 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 SMC5Q8IY18 1101 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 ANKRD35Q8N283 1001 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 GMCL1P1Q8NEA9 526 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 EXOC6Q8TAG9 804 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 STAG1Q8WVM7 1258 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 LBHD1Q9BQE6 289 aaPredicted RBP8.47□□□□□ -1.05
NUP43-206ENST00000543637 TINF2Q9BSI4 451 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 RAVER2Q9HCJ3 691 aaKnown RBP8.47□□□□□ -1.05
NUP43-206ENST00000543637 RBM27Q9P2N5 1060 aaKnown RBP8.47□□□□□ -1.05
NUP43-206ENST00000543637 NRBP1Q9UHY1 535 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 ANAPC4Q9UJX5 808 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 SALL3Q9BXA9 1300 aa8.47□□□□□ -1.05
NUP43-206ENST00000543637 ZNF213O14771 459 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 ATP2A1O14983 1001 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 ABCB7O75027 752 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 FGAP02671 866 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 PGK2P07205 417 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 RARBP10826 455 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 SYN1P17600 705 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 MCCP23508 829 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 BMP8BP34820 402 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 OAZ1P54368 228 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 NUCB1Q02818 461 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 ZNF792Q3KQV3 632 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 PRAMEF19Q5SWL8 479 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 GJC2Q5T442 439 aaPredicted RBP8.46□□□□□ -1.06
NUP43-206ENST00000543637 ANO1Q5XXA6 986 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 RNF180Q86T96 592 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 LRRC47Q8N1G4 583 aaKnown RBP8.46□□□□□ -1.06
NUP43-206ENST00000543637 MSL3Q8N5Y2 521 aaKnown RBP8.46□□□□□ -1.06
NUP43-206ENST00000543637 CHST13Q8NET6 341 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 RNF41Q9H4P4 317 aaPredicted RBP8.46□□□□□ -1.06
NUP43-206ENST00000543637 DIAPH3Q9NSV4 1193 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 ZNF214Q9UL59 606 aaPredicted RBP8.46□□□□□ -1.06
NUP43-206ENST00000543637 FAM184BQ9ULE4 1060 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 ZMYND8Q9ULU4 1186 aaPredicted RBP8.46□□□□□ -1.06
NUP43-206ENST00000543637 MTMR7Q9Y216 660 aa8.46□□□□□ -1.06
NUP43-206ENST00000543637 SUPT16HQ9Y5B9 1047 aaKnown RBP8.46□□□□□ -1.06
NUP43-206ENST00000543637 PLA2G6O60733 806 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 IGHDP01880 384 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 HSPD1P10809 573 aaKnown RBP8.45□□□□□ -1.06
NUP43-206ENST00000543637 PCP11498 1178 aaKnown RBP8.45□□□□□ -1.06
NUP43-206ENST00000543637 COL6A1P12109 1028 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 SDSP20132 328 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 MNX1P50219 401 aaPredicted RBP8.45□□□□□ -1.06
NUP43-206ENST00000543637 FXR1P51114 621 aaKnown RBP eCLIP8.45□□□□□ -1.06
NUP43-206ENST00000543637 ATN1P54259 1190 aaPredicted RBP8.45□□□□□ -1.06
NUP43-206ENST00000543637 NMIQ13287 307 aaPredicted RBP8.45□□□□□ -1.06
NUP43-206ENST00000543637 TKFCQ3LXA3 575 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 CCDC178Q5BJE1 867 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 SLC39A5Q6ZMH5 540 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 PLEKHM2Q8IWE5 1019 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 TRPV1Q8NER1 839 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 CHMP4CQ96CF2 233 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 GMCL1Q96IK5 515 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 FAM227BQ96M60 508 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 TTC14Q96N46 770 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 OSBPL3Q9H4L5 887 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 SPC25Q9HBM1 224 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 SLC38A10Q9HBR0 1119 aa8.45□□□□□ -1.06
NUP43-206ENST00000543637 ORC4O43929 436 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 TOP1P11387 765 aaKnown RBP8.44□□□□□ -1.06
NUP43-206ENST00000543637 ALAS1P13196 640 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 AKR1A1P14550 325 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 LRRC26Q2I0M4 334 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 CCDC96Q2M329 555 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 AKNAD1Q5T1N1 836 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 VPS53Q5VIR6 699 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 CWC27Q6UX04 472 aaKnown RBP8.44□□□□□ -1.06
NUP43-206ENST00000543637 ZNF467Q7Z7K2 595 aaPredicted RBP8.44□□□□□ -1.06
NUP43-206ENST00000543637 REPS2Q8NFH8 660 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 DCAF4Q8WV16 495 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 ESR2Q92731 530 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 VTI1AQ96AJ9 217 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 TRERF1Q96PN7 1200 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 GDF15Q99988 308 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 UBE2OQ9C0C9 1292 aaKnown RBP8.44□□□□□ -1.06
NUP43-206ENST00000543637 ACAD9Q9H845 621 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 XPNPEP3Q9NQH7 507 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 INCENPQ9NQS7 918 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 HOMER2Q9NSB8 354 aa8.44□□□□□ -1.06
NUP43-206ENST00000543637 TCP11L1Q9NUJ3 509 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms