RNA–Protein interactions for RNA: ENST00000543510.1

TMEM258-207, Transcript of transmembrane protein 258, humanhuman

TSL 2 BASIC

Gene TMEM258, Length 1,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-207ENST00000543510 BMP3P12645 472 aa17.29■□□□□ 0.36
TMEM258-207ENST00000543510 SLC16A2P36021 539 aa17.29■□□□□ 0.36
TMEM258-207ENST00000543510 ZNF543Q08ER8 600 aa17.29■□□□□ 0.36
TMEM258-207ENST00000543510 KIAA1755Q5JYT7 1200 aa17.29■□□□□ 0.36
TMEM258-207ENST00000543510 FAM83BQ5T0W9 1011 aa17.29■□□□□ 0.36
TMEM258-207ENST00000543510 ATL3Q6DD88 541 aa17.29■□□□□ 0.36
TMEM258-207ENST00000543510 HOMER1Q86YM7 354 aa17.29■□□□□ 0.36
TMEM258-207ENST00000543510 ZNF396Q96N95 335 aaPredicted RBP17.29■□□□□ 0.36
TMEM258-207ENST00000543510 V9GY48 417 aaPredicted RBP17.29■□□□□ 0.36
TMEM258-207ENST00000543510 ELP1O95163 1332 aa17.29■□□□□ 0.36
TMEM258-207ENST00000543510 KIF3CO14782 793 aa17.28■□□□□ 0.36
TMEM258-207ENST00000543510 TRIM29Q14134 588 aa17.28■□□□□ 0.36
TMEM258-207ENST00000543510 CNTNAP5Q8WYK1 1306 aa17.27■□□□□ 0.36
TMEM258-207ENST00000543510 DEXIO95424 95 aa17.27■□□□□ 0.36
TMEM258-207ENST00000543510 ITGBL1O95965 494 aaPredicted RBP17.27■□□□□ 0.36
TMEM258-207ENST00000543510 SNHG28P0DPA3 235 aa17.27■□□□□ 0.36
TMEM258-207ENST00000543510 GPATCH4Q5T3I0 446 aaKnown RBP17.27■□□□□ 0.36
TMEM258-207ENST00000543510 KRT40Q6A162 431 aa17.27■□□□□ 0.36
TMEM258-207ENST00000543510 SPATA32Q96LK8 384 aa17.27■□□□□ 0.36
TMEM258-207ENST00000543510 AIFM3Q96NN9 605 aa17.27■□□□□ 0.36
TMEM258-207ENST00000543510 GJB4Q9NTQ9 266 aa17.27■□□□□ 0.36
TMEM258-207ENST00000543510 TMEM232C9JQI7 657 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 USP14P54578 494 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 HMGCS2P54868 508 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 MAP3K11Q16584 847 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 BRAPQ7Z569 592 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 LEO1Q8WVC0 666 aaPredicted RBP17.26■□□□□ 0.35
TMEM258-207ENST00000543510 SLC10A4Q96EP9 437 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 GMCL1Q96IK5 515 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 LZTS2Q9BRK4 669 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 WDR18Q9BV38 432 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 RNF26Q9BY78 433 aaPredicted RBP17.26■□□□□ 0.35
TMEM258-207ENST00000543510 RBM27Q9P2N5 1060 aaKnown RBP17.26■□□□□ 0.35
TMEM258-207ENST00000543510 BACE1P56817 501 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 ERO1BQ86YB8 467 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 SYAP1Q96A49 352 aaPredicted RBP17.26■□□□□ 0.35
TMEM258-207ENST00000543510 OPTNQ96CV9 577 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 KIAA1683Q9H0B3 1180 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 TMOD4Q9NZQ9 345 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 SYNPO2Q9UMS6 1093 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 AFG3L2Q9Y4W6 797 aa17.26■□□□□ 0.35
TMEM258-207ENST00000543510 PRPF3O43395 683 aaKnown RBP17.25■□□□□ 0.35
TMEM258-207ENST00000543510 KIF23Q02241 960 aaPredicted RBP17.25■□□□□ 0.35
TMEM258-207ENST00000543510 FUT2Q10981 343 aa17.25■□□□□ 0.35
TMEM258-207ENST00000543510 MKRN3Q13064 507 aaKnown RBP17.25■□□□□ 0.35
TMEM258-207ENST00000543510 ZSCAN23Q3MJ62 389 aa17.25■□□□□ 0.35
TMEM258-207ENST00000543510 CST9Q5W186 159 aa17.25■□□□□ 0.35
TMEM258-207ENST00000543510 SMC1BQ8NDV3 1235 aa17.25■□□□□ 0.35
TMEM258-207ENST00000543510 RRP36Q96EU6 259 aaKnown RBP17.25■□□□□ 0.35
TMEM258-207ENST00000543510 TANGO6Q9C0B7 1094 aa17.25■□□□□ 0.35
TMEM258-207ENST00000543510 EMILIN3Q9NT22 766 aa17.25■□□□□ 0.35
TMEM258-207ENST00000543510 SEC63Q9UGP8 760 aaKnown RBP17.25■□□□□ 0.35
TMEM258-207ENST00000543510 PTPRFP10586 1907 aa17.25■□□□□ 0.35
TMEM258-207ENST00000543510 CYTH3O43739 400 aa17.24■□□□□ 0.35
TMEM258-207ENST00000543510 SNAP25P60880 206 aa17.24■□□□□ 0.35
TMEM258-207ENST00000543510 PPATQ06203 517 aa17.24■□□□□ 0.35
TMEM258-207ENST00000543510 LDLRAD1Q5T700 205 aa17.24■□□□□ 0.35
TMEM258-207ENST00000543510 GADL1Q6ZQY3 521 aa17.24■□□□□ 0.35
TMEM258-207ENST00000543510 ADGRF4Q8IZF3 695 aa17.24■□□□□ 0.35
TMEM258-207ENST00000543510 KIFC2Q96AC6 838 aa17.24■□□□□ 0.35
TMEM258-207ENST00000543510 PIGSQ96S52 555 aa17.24■□□□□ 0.35
TMEM258-207ENST00000543510 TMEM63CQ9P1W3 806 aa17.24■□□□□ 0.35
TMEM258-207ENST00000543510 RCOR1Q9UKL0 485 aa17.24■□□□□ 0.35
TMEM258-207ENST00000543510 GOLGA6L3A6NEY3 463 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 SPDYE5A6NIY4 337 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 C19orf81C9J6K1 198 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 ZNF445P59923 1031 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 FKBP1BP68106 108 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 SLC35G1Q2M3R5 365 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 LPAR1Q92633 364 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 SPZ1Q9BXG8 430 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 FSD2A1L4K1 749 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 KIF28PB7ZC32 967 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 IRF6O14896 467 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 VCAM1P19320 739 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 STAT2P52630 851 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 HUNKP57058 714 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 SYDE2Q5VT97 1194 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 HEATR3Q7Z4Q2 680 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 GPKOWQ92917 476 aaPredicted RBP eCLIP17.23■□□□□ 0.35
TMEM258-207ENST00000543510 USP28Q96RU2 1077 aa17.23■□□□□ 0.35
TMEM258-207ENST00000543510 RPAP3Q9H6T3 665 aaPredicted RBP17.23■□□□□ 0.35
TMEM258-207ENST00000543510 TCHHQ07283 1943 aa17.22■□□□□ 0.35
TMEM258-207ENST00000543510 GOLGA6L4A6NEF3 574 aa17.22■□□□□ 0.35
TMEM258-207ENST00000543510 WDR46O15213 610 aaKnown RBP17.22■□□□□ 0.35
TMEM258-207ENST00000543510 GNL2Q13823 731 aaKnown RBP17.22■□□□□ 0.35
TMEM258-207ENST00000543510 SAFBQ15424 915 aaKnown RBP eCLIP17.22■□□□□ 0.35
TMEM258-207ENST00000543510 TPRNQ4KMQ1 711 aa17.22■□□□□ 0.35
TMEM258-207ENST00000543510 ZNF784Q8NCA9 323 aaPredicted RBP17.22■□□□□ 0.35
TMEM258-207ENST00000543510 JMJD4Q9H9V9 463 aa17.22■□□□□ 0.35
TMEM258-207ENST00000543510 FBXO28Q9NVF7 368 aa17.22■□□□□ 0.35
TMEM258-207ENST00000543510 VPS54Q9P1Q0 977 aa17.22■□□□□ 0.35
TMEM258-207ENST00000543510 FLOT1O75955 427 aa17.21■□□□□ 0.35
TMEM258-207ENST00000543510 TOMM70O94826 608 aa17.21■□□□□ 0.35
TMEM258-207ENST00000543510 SCG2P13521 617 aa17.21■□□□□ 0.35
TMEM258-207ENST00000543510 XBP1P17861 261 aa17.21■□□□□ 0.35
TMEM258-207ENST00000543510 U2AF2P26368 475 aaKnown RBP eCLIP17.21■□□□□ 0.35
TMEM258-207ENST00000543510 CEBPZQ03701 1054 aaKnown RBP17.21■□□□□ 0.35
TMEM258-207ENST00000543510 PPIL2Q13356 520 aa17.21■□□□□ 0.35
TMEM258-207ENST00000543510 PKN1Q16512 942 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms