RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 FCER1AP12319 257 aa15.55■□□□□ 0.08
TNFRSF1A-215ENST00000543359 ZNF792Q3KQV3 632 aa15.55■□□□□ 0.08
TNFRSF1A-215ENST00000543359 MAML3Q96JK9 1138 aa15.55■□□□□ 0.08
TNFRSF1A-215ENST00000543359 FEM1BQ9UK73 627 aa15.55■□□□□ 0.08
TNFRSF1A-215ENST00000543359 LAMA2P24043 3122 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-215ENST00000543359 PFASO15067 1338 aa15.54■□□□□ 0.08
TNFRSF1A-215ENST00000543359 BMP3P12645 472 aa15.54■□□□□ 0.08
TNFRSF1A-215ENST00000543359 HABP4Q5JVS0 413 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-215ENST00000543359 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.54■□□□□ 0.08
TNFRSF1A-215ENST00000543359 GMCL1Q96IK5 515 aa15.54■□□□□ 0.08
TNFRSF1A-215ENST00000543359 TEX13BQ9BXU2 312 aa15.54■□□□□ 0.08
TNFRSF1A-215ENST00000543359 PRO3102Q9H379 93 aa15.54■□□□□ 0.08
TNFRSF1A-215ENST00000543359 COLQQ9Y215 455 aaPredicted RBP15.54■□□□□ 0.08
TNFRSF1A-215ENST00000543359 SMCHD1A6NHR9 2005 aa15.54■□□□□ 0.08
TNFRSF1A-215ENST00000543359 PLXNA1Q9UIW2 1896 aa15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 TSPY2A6NKD2 308 aa15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 RANBP6O60518 1105 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 PLA2G6O60733 806 aa15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 PGK2P07205 417 aa15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 COPB2P35606 906 aa15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 SNRNP48Q6IEG0 339 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 CWC27Q6UX04 472 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 RASGRP2Q7LDG7 609 aa15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 MMP19Q99542 508 aa15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 C11orf49Q9H6J7 331 aa15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 TCP11L1Q9NUJ3 509 aa15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 DDX20Q9UHI6 824 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 STX8Q9UNK0 236 aa15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 DIS3Q9Y2L1 958 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-215ENST00000543359 ZNF536O15090 1300 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 DNAJC25-GNG10A0A024R161 153 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 TMEM232C9JQI7 657 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 ZBED4O75132 1171 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 GSPT1P15170 499 aaKnown RBP15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 MCCP23508 829 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 HAND2P61296 217 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 PPP4R3BQ5MIZ7 849 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 PRAMEF19Q5SWL8 479 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 RCSD1Q6JBY9 416 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 TBC1D10CQ8IV04 446 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 STAG1Q8WVM7 1258 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 KIFC2Q96AC6 838 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 IL25Q9H293 177 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 SLC5A4Q9NY91 659 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 NR2E3Q9Y5X4 410 aa15.52■□□□□ 0.08
TNFRSF1A-215ENST00000543359 OAZ1P54368 228 aa15.51■□□□□ 0.07
TNFRSF1A-215ENST00000543359 AKNAD1Q5T1N1 836 aa15.51■□□□□ 0.07
TNFRSF1A-215ENST00000543359 TINF2Q9BSI4 451 aa15.51■□□□□ 0.07
TNFRSF1A-215ENST00000543359 RAVER2Q9HCJ3 691 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-215ENST00000543359 SEPT4O43236 478 aa15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 EVI5O60447 810 aa15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 MSCO60682 206 aa15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 FDX1P10109 184 aa15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 CNGA1P29973 690 aa15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 SLC1A4P43007 532 aa15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 MFAP1P55081 439 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 KCTD2Q14681 263 aa15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 TTC22Q5TAA0 569 aa15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 KCTD1Q719H9 257 aa15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 CPXCR1Q8N123 301 aa15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 CHMP4CQ96CF2 233 aa15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 FGD4Q96M96 766 aa15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 TMEM47Q9BQJ4 181 aa15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 NRBP1Q9UHY1 535 aa15.5■□□□□ 0.07
TNFRSF1A-215ENST00000543359 HIP1O00291 1037 aa15.49■□□□□ 0.07
TNFRSF1A-215ENST00000543359 ZNF865P0CJ78 1059 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1A-215ENST00000543359 PCP11498 1178 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-215ENST00000543359 TAL1P17542 331 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1A-215ENST00000543359 STAT2P52630 851 aa15.49■□□□□ 0.07
TNFRSF1A-215ENST00000543359 RRP12Q5JTH9 1297 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-215ENST00000543359 MAMDC4Q6UXC1 1216 aa15.49■□□□□ 0.07
TNFRSF1A-215ENST00000543359 CHRDL2Q6WN34 429 aa15.49■□□□□ 0.07
TNFRSF1A-215ENST00000543359 MFSD6Q6ZSS7 791 aa15.49■□□□□ 0.07
TNFRSF1A-215ENST00000543359 FAM160B2Q86V87 743 aa15.49■□□□□ 0.07
TNFRSF1A-215ENST00000543359 CHURC1Q8WUH1 139 aa15.49■□□□□ 0.07
TNFRSF1A-215ENST00000543359 DIAPH3Q9NSV4 1193 aa15.49■□□□□ 0.07
TNFRSF1A-215ENST00000543359 LAMA4Q16363 1823 aa15.49■□□□□ 0.07
TNFRSF1A-215ENST00000543359 NEDD4P46934 1319 aa15.48■□□□□ 0.07
TNFRSF1A-215ENST00000543359 TOP1P11387 765 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-215ENST00000543359 LRRC26Q2I0M4 334 aa15.48■□□□□ 0.07
TNFRSF1A-215ENST00000543359 ANO1Q5XXA6 986 aa15.48■□□□□ 0.07
TNFRSF1A-215ENST00000543359 TTBK2Q6IQ55 1244 aa15.48■□□□□ 0.07
TNFRSF1A-215ENST00000543359 BTNL9Q6UXG8 535 aa15.48■□□□□ 0.07
TNFRSF1A-215ENST00000543359 CHST13Q8NET6 341 aa15.48■□□□□ 0.07
TNFRSF1A-215ENST00000543359 DCAF4Q8WV16 495 aa15.48■□□□□ 0.07
TNFRSF1A-215ENST00000543359 AGBL1Q96MI9 1066 aa15.48■□□□□ 0.07
TNFRSF1A-215ENST00000543359 DSCC1Q9BVC3 393 aa15.48■□□□□ 0.07
TNFRSF1A-215ENST00000543359 RBM27Q9P2N5 1060 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-215ENST00000543359 PRR12Q9ULL5 1215 aa15.48■□□□□ 0.07
TNFRSF1A-215ENST00000543359 DNM1LO00429 736 aa15.47■□□□□ 0.07
TNFRSF1A-215ENST00000543359 SNAI1O95863 264 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1A-215ENST00000543359 FXR1P51114 621 aaKnown RBP eCLIP15.47■□□□□ 0.07
TNFRSF1A-215ENST00000543359 SNAP25P60880 206 aa15.47■□□□□ 0.07
TNFRSF1A-215ENST00000543359 MSL3Q8N5Y2 521 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1A-215ENST00000543359 TTC14Q96N46 770 aa15.47■□□□□ 0.07
TNFRSF1A-215ENST00000543359 TOMM22Q9NS69 142 aa15.47■□□□□ 0.07
TNFRSF1A-215ENST00000543359 SYNGAP1Q96PV0 1343 aa15.46■□□□□ 0.07
TNFRSF1A-215ENST00000543359 ZNF213O14771 459 aa15.46■□□□□ 0.07
TNFRSF1A-215ENST00000543359 SNHG28P0DPA3 235 aa15.46■□□□□ 0.07
TNFRSF1A-215ENST00000543359 SLC4A3P48751 1232 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms