RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 LENG1Q96BZ8 264 aaPredicted RBP23.4■■□□□ 1.34
CACNA1C-230ENST00000543114 ZNF287Q9HBT7 754 aa23.4■■□□□ 1.34
CACNA1C-230ENST00000543114 XPNPEP3Q9NQH7 507 aa23.4■■□□□ 1.34
CACNA1C-230ENST00000543114 RARBP10826 455 aa23.39■■□□□ 1.33
CACNA1C-230ENST00000543114 ADCYAP1R1P41586 468 aa23.39■■□□□ 1.33
CACNA1C-230ENST00000543114 MKL1Q969V6 931 aa23.39■■□□□ 1.33
CACNA1C-230ENST00000543114 FERMT2Q96AC1 680 aa23.39■■□□□ 1.33
CACNA1C-230ENST00000543114 LBHD1Q9BQE6 289 aaPredicted RBP23.39■■□□□ 1.33
CACNA1C-230ENST00000543114 NACAP1Q9BZK3 213 aa23.39■■□□□ 1.33
CACNA1C-230ENST00000543114 NAPBQ9H115 298 aa23.39■■□□□ 1.33
CACNA1C-230ENST00000543114 ATP2A1O14983 1001 aa23.38■■□□□ 1.33
CACNA1C-230ENST00000543114 FOXP2O15409 715 aa23.38■■□□□ 1.33
CACNA1C-230ENST00000543114 TTLL1O95922 423 aa23.38■■□□□ 1.33
CACNA1C-230ENST00000543114 ZNF865P0CJ78 1059 aaPredicted RBP23.38■■□□□ 1.33
CACNA1C-230ENST00000543114 CPXCR1Q8N123 301 aa23.38■■□□□ 1.33
CACNA1C-230ENST00000543114 DEFB123Q8N688 67 aa23.38■■□□□ 1.33
CACNA1C-230ENST00000543114 GMCL1P1Q8NEA9 526 aa23.38■■□□□ 1.33
CACNA1C-230ENST00000543114 KIFC2Q96AC6 838 aa23.38■■□□□ 1.33
CACNA1C-230ENST00000543114 PRKAG2Q9UGJ0 569 aa23.38■■□□□ 1.33
CACNA1C-230ENST00000543114 SYNPO2Q9UMS6 1093 aa23.38■■□□□ 1.33
CACNA1C-230ENST00000543114 PGK1P00558 417 aa23.37■■□□□ 1.33
CACNA1C-230ENST00000543114 TSPY3P0CV98 308 aa23.37■■□□□ 1.33
CACNA1C-230ENST00000543114 TSPY8P0CW00 308 aa23.37■■□□□ 1.33
CACNA1C-230ENST00000543114 PPARAQ07869 468 aa23.37■■□□□ 1.33
CACNA1C-230ENST00000543114 CCDC129Q6ZRS4 1044 aa23.37■■□□□ 1.33
CACNA1C-230ENST00000543114 NEDD1Q8NHV4 660 aa23.37■■□□□ 1.33
CACNA1C-230ENST00000543114 SLC38A10Q9HBR0 1119 aa23.37■■□□□ 1.33
CACNA1C-230ENST00000543114 RAVER2Q9HCJ3 691 aaKnown RBP23.37■■□□□ 1.33
CACNA1C-230ENST00000543114 PRDM5Q9NQX1 630 aaPredicted RBP23.37■■□□□ 1.33
CACNA1C-230ENST00000543114 DNAJC25-GNG10A0A024R161 153 aa23.36■■□□□ 1.33
CACNA1C-230ENST00000543114 ZBED4O75132 1171 aa23.36■■□□□ 1.33
CACNA1C-230ENST00000543114 SLC4A3P48751 1232 aa23.36■■□□□ 1.33
CACNA1C-230ENST00000543114 PDE4BQ07343 736 aa23.36■■□□□ 1.33
CACNA1C-230ENST00000543114 PDLIM7Q9NR12 457 aa23.36■■□□□ 1.33
CACNA1C-230ENST00000543114 FEM1BQ9UK73 627 aa23.36■■□□□ 1.33
CACNA1C-230ENST00000543114 PHF24Q9UPV7 400 aa23.36■■□□□ 1.33
CACNA1C-230ENST00000543114 CNPY2Q9Y2B0 182 aa23.36■■□□□ 1.33
CACNA1C-230ENST00000543114 AKR1A1P14550 325 aa23.35■■□□□ 1.33
CACNA1C-230ENST00000543114 C1orf53Q5VUE5 145 aa23.35■■□□□ 1.33
CACNA1C-230ENST00000543114 SLFN13Q68D06 897 aa23.35■■□□□ 1.33
CACNA1C-230ENST00000543114 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.35■■□□□ 1.33
CACNA1C-230ENST00000543114 DDX11Q96FC9 970 aa23.35■■□□□ 1.33
CACNA1C-230ENST00000543114 CRBNQ96SW2 442 aa23.35■■□□□ 1.33
CACNA1C-230ENST00000543114 SYNGAP1Q96PV0 1343 aa23.34■■□□□ 1.33
CACNA1C-230ENST00000543114 ADAMTS4O75173 837 aa23.34■■□□□ 1.33
CACNA1C-230ENST00000543114 BMP3P12645 472 aa23.34■■□□□ 1.33
CACNA1C-230ENST00000543114 TFAP4Q01664 338 aa23.34■■□□□ 1.33
CACNA1C-230ENST00000543114 SH3RF1Q7Z6J0 888 aa23.34■■□□□ 1.33
CACNA1C-230ENST00000543114 RNF180Q86T96 592 aa23.34■■□□□ 1.33
CACNA1C-230ENST00000543114 MSL3Q8N5Y2 521 aaKnown RBP23.34■■□□□ 1.33
CACNA1C-230ENST00000543114 FGD4Q96M96 766 aa23.34■■□□□ 1.33
CACNA1C-230ENST00000543114 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.34■■□□□ 1.33
CACNA1C-230ENST00000543114 SNAI1O95863 264 aaPredicted RBP23.33■■□□□ 1.33
CACNA1C-230ENST00000543114 SLC3A2P08195 630 aaKnown RBP23.33■■□□□ 1.33
CACNA1C-230ENST00000543114 MAMDC4Q6UXC1 1216 aa23.33■■□□□ 1.33
CACNA1C-230ENST00000543114 MTMR10Q9NXD2 777 aa23.33■■□□□ 1.33
CACNA1C-230ENST00000543114 ZHX1Q9UKY1 873 aaPredicted RBP23.33■■□□□ 1.33
CACNA1C-230ENST00000543114 CTDP1Q9Y5B0 961 aaPredicted RBP23.33■■□□□ 1.33
CACNA1C-230ENST00000543114 SYNRGQ9UMZ2 1314 aa23.33■■□□□ 1.32
CACNA1C-230ENST00000543114 A0A1W2PQ45 241 aaPredicted RBP23.32■■□□□ 1.32
CACNA1C-230ENST00000543114 A0A1W2PQY0 241 aa23.32■■□□□ 1.32
CACNA1C-230ENST00000543114 TRIM43BA6NCK2 446 aa23.32■■□□□ 1.32
CACNA1C-230ENST00000543114 OAZ1P54368 228 aa23.32■■□□□ 1.32
CACNA1C-230ENST00000543114 CTDSPL2Q05D32 466 aa23.32■■□□□ 1.32
CACNA1C-230ENST00000543114 VPS53Q5VIR6 699 aa23.32■■□□□ 1.32
CACNA1C-230ENST00000543114 RASGRP2Q7LDG7 609 aa23.32■■□□□ 1.32
CACNA1C-230ENST00000543114 TRIM43Q96BQ3 446 aaPredicted RBP23.32■■□□□ 1.32
CACNA1C-230ENST00000543114 ISY1Q9ULR0 285 aaKnown RBP23.32■■□□□ 1.32
CACNA1C-230ENST00000543114 LRRC37A2A6NM11 1700 aa23.32■■□□□ 1.32
CACNA1C-230ENST00000543114 TMEM232C9JQI7 657 aa23.31■■□□□ 1.32
CACNA1C-230ENST00000543114 STAT2P52630 851 aa23.31■■□□□ 1.32
CACNA1C-230ENST00000543114 TLE2Q04725 743 aa23.31■■□□□ 1.32
CACNA1C-230ENST00000543114 ANKRD45Q5TZF3 282 aa23.31■■□□□ 1.32
CACNA1C-230ENST00000543114 ZNF467Q7Z7K2 595 aaPredicted RBP23.31■■□□□ 1.32
CACNA1C-230ENST00000543114 BADQ92934 168 aa23.31■■□□□ 1.32
CACNA1C-230ENST00000543114 CHMP4CQ96CF2 233 aa23.31■■□□□ 1.32
CACNA1C-230ENST00000543114 GMCL1Q96IK5 515 aa23.31■■□□□ 1.32
CACNA1C-230ENST00000543114 INCENPQ9NQS7 918 aa23.31■■□□□ 1.32
CACNA1C-230ENST00000543114 HOMER2Q9NSB8 354 aa23.31■■□□□ 1.32
CACNA1C-230ENST00000543114 TACC3Q9Y6A5 838 aa23.31■■□□□ 1.32
CACNA1C-230ENST00000543114 A0A0C4DFX4 3053 aa23.31■■□□□ 1.32
CACNA1C-230ENST00000543114 NMT2O60551 498 aa23.3■■□□□ 1.32
CACNA1C-230ENST00000543114 ANKRD35Q8N283 1001 aa23.3■■□□□ 1.32
CACNA1C-230ENST00000543114 CHST13Q8NET6 341 aa23.3■■□□□ 1.32
CACNA1C-230ENST00000543114 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.3■■□□□ 1.32
CACNA1C-230ENST00000543114 FBXO40Q9UH90 709 aa23.3■■□□□ 1.32
CACNA1C-230ENST00000543114 LCTP09848 1927 aa23.29■■□□□ 1.32
CACNA1C-230ENST00000543114 MYADML2A6NDP7 307 aa23.29■■□□□ 1.32
CACNA1C-230ENST00000543114 TSPY2A6NKD2 308 aa23.29■■□□□ 1.32
CACNA1C-230ENST00000543114 ADCY6O43306 1168 aa23.29■■□□□ 1.32
CACNA1C-230ENST00000543114 SLC1A4P43007 532 aa23.29■■□□□ 1.32
CACNA1C-230ENST00000543114 C9orf50Q5SZB4 431 aa23.29■■□□□ 1.32
CACNA1C-230ENST00000543114 SLC17A8Q8NDX2 589 aa23.29■■□□□ 1.32
CACNA1C-230ENST00000543114 EVI5LQ96CN4 794 aa23.29■■□□□ 1.32
CACNA1C-230ENST00000543114 IL17RBQ9NRM6 502 aa23.29■■□□□ 1.32
CACNA1C-230ENST00000543114 ZBTB47Q9UFB7 747 aaPredicted RBP23.29■■□□□ 1.32
CACNA1C-230ENST00000543114 FAM184BQ9ULE4 1060 aa23.29■■□□□ 1.32
CACNA1C-230ENST00000543114 STX8Q9UNK0 236 aa23.29■■□□□ 1.32
CACNA1C-230ENST00000543114 ZNF536O15090 1300 aa23.29■■□□□ 1.32
CACNA1C-230ENST00000543114 CDH23Q9H251 3354 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms