RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 ORC4O43929 436 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 PAK1Q13153 545 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 NFIXQ14938 502 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 TMTC1Q8IUR5 882 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 ANKRD20A12PQ8NF67 263 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 ZNF384Q8TF68 577 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 A0A0U1RQJ8 604 aa18.73■□□□□ 0.59
KDM2B-216ENST00000543025 ZNF569Q5MCW4 686 aa18.73■□□□□ 0.59
KDM2B-216ENST00000543025 ATRIPQ8WXE1 791 aa18.73■□□□□ 0.59
KDM2B-216ENST00000543025 WTIPA6NIX2 430 aaPredicted RBP18.73■□□□□ 0.59
KDM2B-216ENST00000543025 MCM7P33993 719 aa18.73■□□□□ 0.59
KDM2B-216ENST00000543025 TRIM14Q14142 442 aa18.73■□□□□ 0.59
KDM2B-216ENST00000543025 PFKFB3Q16875 520 aaPredicted RBP18.73■□□□□ 0.59
KDM2B-216ENST00000543025 FAM84BQ96KN1 310 aaPredicted RBP18.73■□□□□ 0.59
KDM2B-216ENST00000543025 ABHD10Q9NUJ1 306 aa18.73■□□□□ 0.59
KDM2B-216ENST00000543025 RMND1Q9NWS8 449 aa18.73■□□□□ 0.59
KDM2B-216ENST00000543025 SMC1AQ14683 1233 aaKnown RBP18.72■□□□□ 0.59
KDM2B-216ENST00000543025 BRD3Q15059 726 aa18.72■□□□□ 0.59
KDM2B-216ENST00000543025 ZNF658Q5TYW1 1059 aaPredicted RBP18.72■□□□□ 0.59
KDM2B-216ENST00000543025 MTRQ99707 1265 aa18.72■□□□□ 0.59
KDM2B-216ENST00000543025 CTAGE9A4FU28 777 aa18.72■□□□□ 0.59
KDM2B-216ENST00000543025 POLR3GO15318 223 aaPredicted RBP18.72■□□□□ 0.59
KDM2B-216ENST00000543025 ARL6IP4Q66PJ3 421 aaKnown RBP18.72■□□□□ 0.59
KDM2B-216ENST00000543025 NSUN4Q96CB9 384 aaKnown RBP18.72■□□□□ 0.59
KDM2B-216ENST00000543025 FUT8Q9BYC5 575 aa18.72■□□□□ 0.59
KDM2B-216ENST00000543025 ZSWIM4Q9H7M6 989 aa18.72■□□□□ 0.59
KDM2B-216ENST00000543025 MINPP1Q9UNW1 487 aa18.72■□□□□ 0.59
KDM2B-216ENST00000543025 NMT2O60551 498 aa18.71■□□□□ 0.59
KDM2B-216ENST00000543025 OAS2P29728 719 aaKnown RBP18.71■□□□□ 0.59
KDM2B-216ENST00000543025 COPB1P53618 953 aaKnown RBP18.71■□□□□ 0.59
KDM2B-216ENST00000543025 TUBB4BP68371 445 aa18.71■□□□□ 0.59
KDM2B-216ENST00000543025 SF3B3Q15393 1217 aaKnown RBP18.71■□□□□ 0.59
KDM2B-216ENST00000543025 IL17AQ16552 155 aa18.71■□□□□ 0.59
KDM2B-216ENST00000543025 TCP11X2Q5H9J9 407 aa18.71■□□□□ 0.59
KDM2B-216ENST00000543025 NUP88Q99567 741 aaPredicted RBP18.71■□□□□ 0.59
KDM2B-216ENST00000543025 VPS16Q9H269 839 aa18.71■□□□□ 0.59
KDM2B-216ENST00000543025 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.71■□□□□ 0.59
KDM2B-216ENST00000543025 POTEB2H3BUK9 544 aa18.71■□□□□ 0.59
KDM2B-216ENST00000543025 COBLO75128 1261 aa18.71■□□□□ 0.59
KDM2B-216ENST00000543025 LONP1P36776 959 aaKnown RBP18.71■□□□□ 0.59
KDM2B-216ENST00000543025 KIF4BQ2VIQ3 1234 aa18.71■□□□□ 0.59
KDM2B-216ENST00000543025 CYP26C1Q6V0L0 522 aa18.71■□□□□ 0.59
KDM2B-216ENST00000543025 NELFBQ8WX92 580 aa18.71■□□□□ 0.59
KDM2B-216ENST00000543025 CRNKL1Q9BZJ0 848 aaKnown RBP18.71■□□□□ 0.59
KDM2B-216ENST00000543025 DCP1AQ9NPI6 582 aaPredicted RBP18.71■□□□□ 0.59
KDM2B-216ENST00000543025 PUF60Q9UHX1 559 aaKnown RBP18.71■□□□□ 0.59
KDM2B-216ENST00000543025 KCNJ18B7U540 433 aa18.7■□□□□ 0.58
KDM2B-216ENST00000543025 ERVK-24P63145 666 aa18.7■□□□□ 0.58
KDM2B-216ENST00000543025 KCNJ12Q14500 433 aa18.7■□□□□ 0.58
KDM2B-216ENST00000543025 LONRF2Q1L5Z9 754 aa18.7■□□□□ 0.58
KDM2B-216ENST00000543025 ERFEQ4G0M1 354 aa18.7■□□□□ 0.58
KDM2B-216ENST00000543025 FAM47AQ5JRC9 791 aa18.7■□□□□ 0.58
KDM2B-216ENST00000543025 ACRBPQ8NEB7 543 aa18.7■□□□□ 0.58
KDM2B-216ENST00000543025 MYO1AQ9UBC5 1043 aa18.7■□□□□ 0.58
KDM2B-216ENST00000543025 RPN1P04843 607 aaKnown RBP18.7■□□□□ 0.58
KDM2B-216ENST00000543025 CALML3P27482 149 aa18.7■□□□□ 0.58
KDM2B-216ENST00000543025 TM4SF1P30408 202 aa18.7■□□□□ 0.58
KDM2B-216ENST00000543025 NBPF5PQ86XG9 351 aaPredicted RBP18.7■□□□□ 0.58
KDM2B-216ENST00000543025 SLC35F6Q8N357 371 aa18.7■□□□□ 0.58
KDM2B-216ENST00000543025 PDGFDQ9GZP0 370 aaPredicted RBP18.7■□□□□ 0.58
KDM2B-216ENST00000543025 ATP8A2Q9NTI2 1148 aa18.7■□□□□ 0.58
KDM2B-216ENST00000543025 ARPP21Q9UBL0 812 aaPredicted RBP18.7■□□□□ 0.58
KDM2B-216ENST00000543025 LAMB1P07942 1786 aa18.7■□□□□ 0.58
KDM2B-216ENST00000543025 KIF5BP33176 963 aa18.69■□□□□ 0.58
KDM2B-216ENST00000543025 MECOMQ03112 1051 aa18.69■□□□□ 0.58
KDM2B-216ENST00000543025 EVX2Q03828 476 aa18.69■□□□□ 0.58
KDM2B-216ENST00000543025 C3orf67Q6ZVT6 689 aa18.69■□□□□ 0.58
KDM2B-216ENST00000543025 HNRNPLLQ8WVV9 542 aaKnown RBP18.69■□□□□ 0.58
KDM2B-216ENST00000543025 ANKZF1Q9H8Y5 726 aa18.69■□□□□ 0.58
KDM2B-216ENST00000543025 TAB2Q9NYJ8 693 aa18.69■□□□□ 0.58
KDM2B-216ENST00000543025 CALCOCO1Q9P1Z2 691 aa18.69■□□□□ 0.58
KDM2B-216ENST00000543025 TSPY2A6NKD2 308 aa18.69■□□□□ 0.58
KDM2B-216ENST00000543025 DDR1Q08345 913 aa18.69■□□□□ 0.58
KDM2B-216ENST00000543025 NYXQ9GZU5 481 aa18.69■□□□□ 0.58
KDM2B-216ENST00000543025 NRXN2Q9P2S2 1712 aa18.68■□□□□ 0.58
KDM2B-216ENST00000543025 MSL1Q68DK7 614 aa18.68■□□□□ 0.58
KDM2B-216ENST00000543025 FBXO33Q7Z6M2 555 aa18.68■□□□□ 0.58
KDM2B-216ENST00000543025 NLGN1Q8N2Q7 840 aa18.68■□□□□ 0.58
KDM2B-216ENST00000543025 MSANTD4Q8NCY6 345 aa18.68■□□□□ 0.58
KDM2B-216ENST00000543025 NAPGQ99747 312 aaPredicted RBP18.68■□□□□ 0.58
KDM2B-216ENST00000543025 TNRC6CQ9HCJ0 1690 aaKnown RBP18.68■□□□□ 0.58
KDM2B-216ENST00000543025 STAT6P42226 847 aa18.68■□□□□ 0.58
KDM2B-216ENST00000543025 BLIDQ8IZY5 108 aa18.68■□□□□ 0.58
KDM2B-216ENST00000543025 RAB21Q9UL25 225 aa18.68■□□□□ 0.58
KDM2B-216ENST00000543025 PDS5AQ29RF7 1337 aaKnown RBP18.68■□□□□ 0.58
KDM2B-216ENST00000543025 MYH8P13535 1937 aa18.68■□□□□ 0.58
KDM2B-216ENST00000543025 MYH13Q9UKX3 1938 aa18.68■□□□□ 0.58
KDM2B-216ENST00000543025 H7C1D1 291 aa18.67■□□□□ 0.58
KDM2B-216ENST00000543025 VEGFAP15692 232 aaPredicted RBP18.67■□□□□ 0.58
KDM2B-216ENST00000543025 CDC25AP30304 524 aa18.67■□□□□ 0.58
KDM2B-216ENST00000543025 KRT9P35527 623 aa18.67■□□□□ 0.58
KDM2B-216ENST00000543025 PRCPP42785 496 aa18.67■□□□□ 0.58
KDM2B-216ENST00000543025 SBK1Q52WX2 424 aa18.67■□□□□ 0.58
KDM2B-216ENST00000543025 C4orf32Q8N8J7 132 aa18.67■□□□□ 0.58
KDM2B-216ENST00000543025 SH3GLB2Q9NR46 395 aa18.67■□□□□ 0.58
KDM2B-216ENST00000543025 GDAQ9Y2T3 454 aa18.67■□□□□ 0.58
KDM2B-216ENST00000543025 RNF225M0QZC1 329 aaPredicted RBP18.67■□□□□ 0.58
KDM2B-216ENST00000543025 POLRMTO00411 1230 aaKnown RBP18.67■□□□□ 0.58
KDM2B-216ENST00000543025 MAP2K7O14733 419 aa18.67■□□□□ 0.58
KDM2B-216ENST00000543025 ADAMTS3O15072 1205 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms