RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 LBX2Q6XYB7 198 aa12.45□□□□□ -0.42
NPIPB3-210ENST00000542817 TMTC3Q6ZXV5 915 aa12.45□□□□□ -0.42
NPIPB3-210ENST00000542817 IL27Q8NEV9 243 aa12.45□□□□□ -0.42
NPIPB3-210ENST00000542817 GTF3C6Q969F1 213 aa12.45□□□□□ -0.42
NPIPB3-210ENST00000542817 JMJD4Q9H9V9 463 aa12.45□□□□□ -0.42
NPIPB3-210ENST00000542817 TXNRD2Q9NNW7 524 aa12.45□□□□□ -0.42
NPIPB3-210ENST00000542817 PPP1R9AQ9ULJ8 1098 aa12.45□□□□□ -0.42
NPIPB3-210ENST00000542817 PRR12Q9ULL5 1215 aa12.45□□□□□ -0.42
NPIPB3-210ENST00000542817 ZNF536O15090 1300 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 GOLGA8AA7E2F4 631 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 KLRF2D3W0D1 207 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 PPP1R11O60927 126 aaPredicted RBP12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 CALM1P0DP23 149 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 CALM2P0DP24 149 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 CALM3P0DP25 149 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 METAP2P50579 478 aaKnown RBP eCLIP12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 SNAP25P60880 206 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 CCT2P78371 535 aaKnown RBP12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 FGD1P98174 961 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 STK3Q13188 491 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 GPATCH4Q5T3I0 446 aaKnown RBP12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 ADGRF4Q8IZF3 695 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 SHISA4Q96DD7 197 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 ATG4CQ96DT6 458 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 TMX3Q96JJ7 454 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 SLF1Q9BQI6 1058 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 ZCCHC17Q9NP64 241 aaKnown RBP12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 RBPJLQ9UBG7 517 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 FEM1BQ9UK73 627 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 A0A0G2JMZ2 1700 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 MYPNQ86TC9 1320 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 CNTNAP5Q8WYK1 1306 aa12.44□□□□□ -0.42
NPIPB3-210ENST00000542817 VWA5AO00534 786 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 ST18O60284 1047 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 FLOT1O75955 427 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 TAL1P17542 331 aaPredicted RBP12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 SMARCA1P28370 1054 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 STAT2P52630 851 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 HERVK_113P62684 666 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 SREBF2Q12772 1141 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 COG2Q14746 738 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 RTN1Q16799 776 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 CCDC96Q2M329 555 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 SYDE2Q5VT97 1194 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 SPZ1Q9BXG8 430 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 CFHR5Q9BXR6 569 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 TANGO6Q9C0B7 1094 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 RANBP17Q9H2T7 1088 aaKnown RBP12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 SLC38A10Q9HBR0 1119 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 BTBD7Q9P203 1132 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 ZNF214Q9UL59 606 aaPredicted RBP12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 SMCHD1A6NHR9 2005 aa12.43□□□□□ -0.42
NPIPB3-210ENST00000542817 PPFIA3O75145 1194 aa12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 BCRP11274 1271 aa12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 FDPSP14324 419 aaKnown RBP12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 IFNAR1P17181 557 aa12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 CAP1Q01518 475 aa12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 CRHR2Q13324 411 aa12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 CUL4AQ13619 759 aa12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 TMEM132BQ14DG7 1078 aa12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 PKN1Q16512 942 aa12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 Q3C1V9 767 aa12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 FAM160B2Q86V87 743 aa12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 PRPF38AQ8NAV1 312 aaKnown RBP12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 KIFC2Q96AC6 838 aa12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 RNF186Q9NXI6 227 aa12.42□□□□□ -0.42
NPIPB3-210ENST00000542817 hCG_1642624A0A1W2PR95 340 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 CA12O43570 354 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 JAK2O60674 1132 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 OSBPP22059 807 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 MCM2P49736 904 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 PPP2R5BQ15173 497 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 C17orf99Q6UX52 265 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 SYNE3Q6ZMZ3 975 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 CCDC82Q8N4S0 544 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 NSUN7Q8NE18 718 aaKnown RBP12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 CTCFLQ8NI51 663 aaPredicted RBP12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 CHURC1Q8WUH1 139 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 PHKBQ93100 1093 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 ZSCAN31Q96LW9 406 aaPredicted RBP12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 PIGSQ96S52 555 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 SLKQ9H2G2 1235 aaPredicted RBP12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 RBM28Q9NW13 759 aaKnown RBP12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 HOXC10Q9NYD6 342 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 NAP1L2Q9ULW6 460 aaPredicted RBP12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 RIPK3Q9Y572 518 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 BRCA2P51587 3418 aa12.41□□□□□ -0.42
NPIPB3-210ENST00000542817 TLR2O60603 784 aa12.4□□□□□ -0.42
NPIPB3-210ENST00000542817 KIF5BP33176 963 aa12.4□□□□□ -0.42
NPIPB3-210ENST00000542817 GNAQP50148 359 aa12.4□□□□□ -0.42
NPIPB3-210ENST00000542817 PABPC4Q13310 644 aaKnown RBP eCLIP12.4□□□□□ -0.42
NPIPB3-210ENST00000542817 QRICH1Q2TAL8 776 aa12.4□□□□□ -0.42
NPIPB3-210ENST00000542817 TYW1BQ6NUM6 668 aa12.4□□□□□ -0.42
NPIPB3-210ENST00000542817 CCDC83Q8IWF9 413 aa12.4□□□□□ -0.42
NPIPB3-210ENST00000542817 JMYQ8N9B5 988 aa12.4□□□□□ -0.42
NPIPB3-210ENST00000542817 SMARCC2Q8TAQ2 1214 aa12.4□□□□□ -0.42
NPIPB3-210ENST00000542817 PARK7Q99497 189 aaKnown RBP12.4□□□□□ -0.42
NPIPB3-210ENST00000542817 LZTS2Q9BRK4 669 aa12.4□□□□□ -0.42
NPIPB3-210ENST00000542817 VAT1LQ9HCJ6 419 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms